##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935032.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1188777 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.37145654735917 33.0 31.0 34.0 31.0 34.0 2 32.54757620647102 34.0 31.0 34.0 31.0 34.0 3 32.55228861258251 34.0 31.0 34.0 31.0 34.0 4 36.066558320021336 37.0 35.0 37.0 35.0 37.0 5 35.98453789062204 37.0 35.0 37.0 35.0 37.0 6 35.927963781264275 37.0 35.0 37.0 35.0 37.0 7 36.15807169889727 37.0 35.0 37.0 35.0 37.0 8 35.87456941041087 37.0 35.0 37.0 35.0 37.0 9 37.625285482474844 39.0 38.0 39.0 35.0 39.0 10 37.50415090466925 39.0 37.0 39.0 35.0 39.0 11 37.434132726322936 39.0 37.0 39.0 35.0 39.0 12 37.23537803978375 39.0 37.0 39.0 35.0 39.0 13 37.13307205640755 39.0 37.0 39.0 33.0 39.0 14 38.31436005238998 40.0 37.0 41.0 34.0 41.0 15 38.410377219613096 40.0 37.0 41.0 34.0 41.0 16 38.45625041534283 40.0 37.0 41.0 34.0 41.0 17 38.4797064546168 40.0 37.0 41.0 35.0 41.0 18 38.48210135290302 40.0 37.0 41.0 35.0 41.0 19 38.443438088051835 40.0 37.0 41.0 34.0 41.0 20 38.43471651958273 40.0 37.0 41.0 34.0 41.0 21 38.36085573660998 40.0 37.0 41.0 34.0 41.0 22 38.28427114589196 40.0 37.0 41.0 34.0 41.0 23 38.09801585999729 40.0 36.0 41.0 34.0 41.0 24 37.909783752545685 40.0 36.0 41.0 34.0 41.0 25 37.83963266449469 40.0 36.0 41.0 34.0 41.0 26 37.974073354380174 40.0 36.0 41.0 34.0 41.0 27 38.01571615197804 40.0 36.0 41.0 34.0 41.0 28 37.9917654867145 40.0 36.0 41.0 34.0 41.0 29 38.020692695097566 40.0 36.0 41.0 34.0 41.0 30 37.96448198442601 40.0 36.0 41.0 34.0 41.0 31 37.86262604340427 40.0 36.0 41.0 34.0 41.0 32 37.75743305935428 40.0 36.0 41.0 34.0 41.0 33 37.709064862459485 40.0 36.0 41.0 33.0 41.0 34 37.572087952576474 40.0 35.0 41.0 33.0 41.0 35 37.48613827488251 40.0 35.0 41.0 33.0 41.0 36 37.446572401720424 40.0 35.0 41.0 33.0 41.0 37 37.3488265671358 40.0 35.0 41.0 33.0 41.0 38 37.30546603778505 39.0 35.0 41.0 33.0 41.0 39 37.258130835303845 39.0 35.0 41.0 33.0 41.0 40 37.168216578887375 39.0 35.0 41.0 33.0 41.0 41 37.139104306358554 39.0 35.0 41.0 33.0 41.0 42 37.13796616186215 39.0 35.0 41.0 33.0 41.0 43 37.04841698653322 39.0 35.0 41.0 33.0 41.0 44 36.92820099985111 39.0 35.0 41.0 32.0 41.0 45 36.93514090531698 39.0 35.0 41.0 32.0 41.0 46 36.86501673568718 39.0 35.0 41.0 32.0 41.0 47 36.809374676663495 39.0 35.0 41.0 32.0 41.0 48 36.75128051770854 39.0 35.0 41.0 32.0 41.0 49 36.67181565592201 39.0 35.0 41.0 32.0 41.0 50 36.581183855340406 39.0 35.0 41.0 32.0 41.0 51 35.64315006094499 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 10.0 9 12.0 10 21.0 11 27.0 12 25.0 13 26.0 14 34.0 15 47.0 16 78.0 17 132.0 18 250.0 19 438.0 20 750.0 21 1193.0 22 1934.0 23 2648.0 24 3779.0 25 4903.0 26 6105.0 27 7357.0 28 8831.0 29 10947.0 30 13636.0 31 17799.0 32 23788.0 33 34845.0 34 72897.0 35 112608.0 36 79669.0 37 127388.0 38 240566.0 39 415661.0 40 372.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.93940495147534 22.438522952580676 25.45986337218839 10.16220872375559 2 30.83050900210889 24.547581253674995 26.607092835746315 18.014816908469797 3 31.694506202593086 24.200501860315267 26.785259136070096 17.319732801021555 4 28.94150879433233 26.509681799025387 25.73131882598671 18.817490580655583 5 25.751928242218685 30.255968949601147 24.2086615067418 19.78344130143837 6 26.901513067631694 35.114659856306105 22.698958677699853 15.28486839836235 7 80.26046937314568 6.589461269859696 8.003940183903289 5.146129173091336 8 80.87151753440722 5.466963105780142 7.503846390029417 6.157672969783231 9 75.11863032343325 8.032120406098032 10.078004537436373 6.7712447330323515 10 41.21285993924849 28.701934845643883 16.32467653731524 13.760528677792387 11 33.51730391822856 24.124457320422586 23.50710015419208 18.851138607156766 12 29.639284743900664 22.71788569260677 26.9614065548038 20.681423008688764 13 24.263003069541217 26.91909416147856 28.777138184874033 20.040764584106185 14 19.389507031175736 30.55518402526294 28.067080705632762 21.98822823792856 15 18.202152296015147 26.258246920995276 35.3401857539303 20.199415029059274 16 20.760495870966547 25.923364937242226 31.776102666858456 21.540036524932766 17 20.518566560423025 25.3564798107635 27.43348836661544 26.69146526219804 18 21.60968793979022 26.25126495549628 29.21489900965446 22.924148095059042 19 23.66061927510374 27.970090269243098 26.748162186852536 21.621128268800625 20 26.662275599208265 26.62450568946068 26.434730819993995 20.278487891337065 21 23.53965461983198 28.083988838949608 26.814617039192377 21.561739502026033 22 21.533979880162555 26.755732992815307 26.156714001027947 25.553573125994195 23 21.393247009321346 27.01869231992207 27.13107672843603 24.456983942320555 24 22.363319613350527 24.07743420338718 29.424610334823097 24.134635848439196 25 20.780011726337236 27.323964040354078 27.026515486083596 24.86950874722509 26 20.582666050907783 29.449425754367724 27.534095965853982 22.43381222887051 27 22.37274106077086 27.933077440091793 27.644882093109135 22.04929940602821 28 18.4021898135647 27.057135190199677 29.98451349580283 24.556161500432797 29 20.25829907543635 26.06460252848095 29.599159472298 24.077938923784696 30 22.603145922237726 26.33050605790657 27.125945404394603 23.9404026154611 31 22.429606225557862 29.450014594831497 24.35309566049814 23.7672835191125 32 23.487668418887647 29.91334791975282 24.039832533772103 22.55915112758743 33 24.281425364050616 28.40213092951832 23.84787054258284 23.468573163848223 34 21.29642481306418 28.008364899388194 25.924290257971006 24.770920029576615 35 21.476778235110537 27.51054234730315 26.72368324757293 24.288996170013384 36 24.38741664752935 27.61005638568041 25.717943735452486 22.284583231337756 37 21.98906943859109 29.63768646264186 26.197175752895625 22.176068345871432 38 21.148962336922736 29.267474051062564 24.80263329455398 24.78093031746072 39 23.196360629453633 27.504317462400437 25.80610156488559 23.493220343260344 40 21.98427459481467 26.485286979812024 28.319356784325407 23.2110816410479 41 19.717995889893565 28.48978403855391 26.56721992434241 25.225000147210114 42 23.505501872933273 25.820401976148595 26.5654534029511 24.10864274796703 43 24.260395347487375 25.821074936678617 26.2533679571526 23.665161758681403 44 21.329483999101598 26.500596831870066 25.541964556851287 26.627954612177053 45 21.084778726371724 27.021300041975916 25.495446160213397 26.398475071438966 46 22.111211774790394 27.62561859793721 26.026496138468357 24.23667348880404 47 20.561720154410793 26.370210729177973 28.977007462291077 24.091061654120157 48 21.396359451772703 24.750226493278387 28.46395917821425 25.389454876734664 49 21.802238771443257 24.450254337020315 29.460024882715597 24.28748200882083 50 19.914416244594236 24.865723344243705 28.738106474132657 26.4817539370294 51 19.755934039773653 25.65569488642529 25.767406334409227 28.82096473939183 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 849.0 1 1168.0 2 1487.0 3 1958.5 4 2430.0 5 1942.0 6 1454.0 7 1537.5 8 1621.0 9 1597.5 10 1574.0 11 1682.5 12 1791.0 13 1769.5 14 1748.0 15 1880.5 16 2013.0 17 2269.5 18 2526.0 19 2487.5 20 2449.0 21 3041.0 22 3633.0 23 4292.5 24 4952.0 25 6250.0 26 9015.5 27 10483.0 28 13048.5 29 15614.0 30 17298.0 31 18982.0 32 21551.5 33 24121.0 34 27962.5 35 31804.0 36 34436.5 37 37069.0 38 38923.0 39 40777.0 40 47122.5 41 53468.0 42 62857.5 43 72247.0 44 79124.0 45 86001.0 46 93589.5 47 101178.0 48 113084.0 49 124990.0 50 119242.0 51 113494.0 52 100713.0 53 87932.0 54 77293.5 55 66655.0 56 59030.0 57 51405.0 58 50683.5 59 49962.0 60 49605.5 61 49249.0 62 44696.5 63 40144.0 64 32688.5 65 25233.0 66 21482.0 67 17731.0 68 14958.0 69 12185.0 70 10189.0 71 8193.0 72 7015.0 73 5837.0 74 4534.0 75 2713.5 76 2196.0 77 1670.0 78 1144.0 79 959.0 80 774.0 81 516.5 82 259.0 83 262.5 84 266.0 85 147.0 86 28.0 87 26.0 88 24.0 89 20.0 90 16.0 91 11.0 92 6.0 93 4.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1188777.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.229490625267186 #Duplication Level Percentage of deduplicated Percentage of total 1 66.26195895836466 12.741837186017124 2 12.680550469918689 4.876810527690576 3 5.892973508754058 3.3995663652460215 4 3.2712028216107276 2.516142559660442 5 2.085361434054819 2.005021907322544 6 1.4120379150285642 1.629166190973816 7 0.9919095529789099 1.3351740815084638 8 0.7129979743773592 1.096847029129914 9 0.5342803515480552 0.9246545110222005 >10 3.515946816287979 14.056879011071851 >50 1.4118408973834227 19.97894214794381 >100 1.2174249134614175 32.85026735009814 >500 0.008414359169067636 1.1125291450939012 >1k 0.003100027062288077 1.4761619872211944 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC 4589 0.38602698403485264 No Hit CCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC 3789 0.3187309310324813 No Hit CTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGCT 3387 0.28491466439878965 No Hit TCTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC 1718 0.14451827382259247 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 1408 0.11844105328417356 No Hit ACTGTCTCTTATACACATCTGACGCTGCACAAGTCGTATGCCGTCTTCTGC 1382 0.1162539315615965 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.001850641457565212 0.0 0.0 0.30064511678809397 0.0 2 0.001850641457565212 0.0 0.0 1.3277511257367867 0.0 3 0.001850641457565212 0.0 0.0 1.8563616220704136 0.0 4 0.001850641457565212 0.0 0.0 2.4934028838041113 0.0 5 0.001850641457565212 0.0 0.0 4.162176758130415 0.0 6 0.001850641457565212 0.0 0.0 5.001274419003733 0.0 7 0.001850641457565212 0.0 0.0 5.921127343479895 0.0 8 0.001850641457565212 0.0 0.0 7.314576240960247 0.0 9 0.001850641457565212 0.0 0.0 7.759571391438428 0.0 10 0.001850641457565212 0.0 0.0 8.91268925963406 0.0 11 0.001850641457565212 0.0 0.0 10.609306875890095 0.0 12 0.001850641457565212 0.0 0.0 11.903830575456961 0.0 13 0.001850641457565212 0.0 0.0 12.388278037007781 0.0 14 0.001850641457565212 0.0 0.0 12.583604830847165 0.0 15 0.001850641457565212 0.0 0.0 12.986287588000105 0.0 16 0.001850641457565212 0.0 0.0 13.804271112243928 0.0 17 0.001850641457565212 0.0 0.0 14.786457005813539 0.0 18 0.0019347615238181762 0.0 0.0 15.883466789818444 0.0 19 0.0019347615238181762 0.0 0.0 16.541033347717864 0.0 20 0.0019347615238181762 0.0 0.0 17.17546688739772 0.0 21 0.0019347615238181762 0.0 0.0 17.94230541135974 0.0 22 0.0019347615238181762 0.0 0.0 18.712845218236893 0.0 23 0.0019347615238181762 0.0 0.0 19.501470839358433 0.0 24 0.0019347615238181762 0.0 0.0 20.1489429893075 0.0 25 0.0019347615238181762 0.0 0.0 20.71179035260608 0.0 26 0.0019347615238181762 0.0 0.0 21.235690125229542 0.0 27 0.0019347615238181762 0.0 0.0 21.705668935384853 0.0 28 0.0019347615238181762 0.0 0.0 22.184985072894243 0.0 29 0.0019347615238181762 0.0 0.0 22.723353496913216 0.0 30 0.0019347615238181762 0.0 0.0 23.314465202472793 0.0 31 0.0019347615238181762 0.0 0.0 23.876219004910087 0.0 32 0.0019347615238181762 0.0 0.0 24.384304205077992 0.0 33 0.0019347615238181762 0.0 0.0 24.89676364869105 0.0 34 0.0019347615238181762 0.0 0.0 25.3877724754096 0.0 35 0.0019347615238181762 0.0 0.0 25.947255036058067 0.0 36 0.0019347615238181762 0.0 0.0 26.515990803994356 0.0 37 0.0019347615238181762 0.0 0.0 27.030216768998727 0.0 38 0.0019347615238181762 0.0 0.0 27.542087372148014 0.0 39 0.0019347615238181762 0.0 0.0 28.053453254899782 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCATCG 20 7.0333836E-4 45.000004 32 AGATCGC 30 2.165565E-6 45.000004 26 GGTAATC 20 7.0333836E-4 45.000004 8 TCCGCAT 20 7.0333836E-4 45.000004 32 TCACACG 30 2.165565E-6 45.000004 1 ATTACGG 60 0.0 45.000004 2 GCCGGAT 60 0.0 45.000004 19 CGATTCT 35 1.2119744E-7 45.000004 10 CGACACG 20 7.0333836E-4 45.000004 12 TCTAGCG 30 2.165565E-6 45.000004 1 CACCTCG 20 7.0333836E-4 45.000004 12 ACGATTC 20 7.0333836E-4 45.000004 1 CTAACGT 20 7.0333836E-4 45.000004 45 ACGATAG 20 7.0333836E-4 45.000004 1 GCCGAAC 30 2.165565E-6 45.000004 9 CGGATTA 20 7.0333836E-4 45.000004 7 CACTACG 20 7.0333836E-4 45.000004 12 TATTCGC 35 1.2119744E-7 45.000004 13 AGCGCAT 20 7.0333836E-4 45.000004 10 GCTAGAT 20 7.0333836E-4 45.000004 36 >>END_MODULE