##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935030.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1574566 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.304731589530064 33.0 31.0 34.0 30.0 34.0 2 32.47490165544029 34.0 31.0 34.0 31.0 34.0 3 32.48759785236059 34.0 31.0 34.0 31.0 34.0 4 36.00454664967997 37.0 35.0 37.0 35.0 37.0 5 35.92105189620505 37.0 35.0 37.0 35.0 37.0 6 35.86810524296854 37.0 35.0 37.0 35.0 37.0 7 36.125117651467136 37.0 35.0 37.0 35.0 37.0 8 35.88143018457149 37.0 35.0 37.0 35.0 37.0 9 37.62012834012674 39.0 38.0 39.0 35.0 39.0 10 37.45404447955818 39.0 37.0 39.0 35.0 39.0 11 37.37123880485162 39.0 37.0 39.0 35.0 39.0 12 37.210346851132314 39.0 37.0 39.0 34.0 39.0 13 37.113120694845435 39.0 37.0 39.0 33.0 39.0 14 38.193587947409 40.0 37.0 41.0 33.0 41.0 15 38.25358670262155 40.0 37.0 41.0 34.0 41.0 16 38.349510912848366 40.0 37.0 41.0 34.0 41.0 17 38.39492723709263 40.0 37.0 41.0 34.0 41.0 18 38.37453177574011 40.0 37.0 41.0 34.0 41.0 19 38.358573092522 40.0 37.0 41.0 34.0 41.0 20 38.329255172536435 40.0 37.0 41.0 34.0 41.0 21 38.25042646672162 40.0 37.0 41.0 34.0 41.0 22 38.20292448839871 40.0 37.0 41.0 34.0 41.0 23 38.0196193744816 40.0 36.0 41.0 34.0 41.0 24 37.8019917869432 40.0 36.0 41.0 33.0 41.0 25 37.76192233288411 40.0 36.0 41.0 33.0 41.0 26 37.93621226420487 40.0 36.0 41.0 34.0 41.0 27 37.95465290118039 40.0 36.0 41.0 34.0 41.0 28 37.93457308236047 40.0 36.0 41.0 34.0 41.0 29 37.98545885024826 40.0 36.0 41.0 34.0 41.0 30 37.90637737636911 40.0 36.0 41.0 34.0 41.0 31 37.79209191612165 40.0 36.0 41.0 34.0 41.0 32 37.69640904223767 40.0 36.0 41.0 33.0 41.0 33 37.61491801550395 40.0 36.0 41.0 33.0 41.0 34 37.43780508406761 40.0 35.0 41.0 33.0 41.0 35 37.37151507145461 40.0 35.0 41.0 33.0 41.0 36 37.32888300649195 39.0 35.0 41.0 33.0 41.0 37 37.224068727509675 39.0 35.0 41.0 33.0 41.0 38 37.14726216620961 39.0 35.0 41.0 33.0 41.0 39 37.111427529871726 39.0 35.0 41.0 33.0 41.0 40 37.04163941047882 39.0 35.0 41.0 32.0 41.0 41 36.993682703678346 39.0 35.0 41.0 32.0 41.0 42 36.95613902497577 39.0 35.0 41.0 32.0 41.0 43 36.893883139862034 39.0 35.0 41.0 32.0 41.0 44 36.76606442664201 39.0 35.0 41.0 32.0 41.0 45 36.76085600730614 39.0 35.0 41.0 32.0 41.0 46 36.66315988024637 39.0 35.0 41.0 32.0 41.0 47 36.6020598691957 39.0 35.0 41.0 32.0 41.0 48 36.54695135040386 39.0 35.0 40.0 31.0 41.0 49 36.499522408079436 38.0 35.0 40.0 31.0 41.0 50 36.4262990563749 38.0 35.0 40.0 31.0 41.0 51 35.415723443793404 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 23.0 10 34.0 11 27.0 12 29.0 13 37.0 14 43.0 15 77.0 16 87.0 17 215.0 18 361.0 19 679.0 20 1078.0 21 1768.0 22 2620.0 23 3893.0 24 5466.0 25 6980.0 26 8489.0 27 10429.0 28 12200.0 29 14783.0 30 18790.0 31 24869.0 32 34049.0 33 50108.0 34 99158.0 35 135099.0 36 118395.0 37 188026.0 38 331469.0 39 504880.0 40 398.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.73118179866706 21.91969088625056 25.444154135171214 10.904973179911163 2 30.285742229922402 24.906672695841266 26.169941431480165 18.637643642756164 3 31.556441584538213 24.759139978889422 27.042308801282385 16.642109635289977 4 28.8596349724305 25.649417045712912 26.58853296717953 18.90241501467706 5 25.048997628552883 30.247572982015363 24.988600033279013 19.714829356152745 6 27.049548891567582 32.749024175550595 24.049230073556778 16.152196859325045 7 79.93364520763183 6.187927339978128 8.636221028524686 5.24220642386537 8 79.5349956749987 4.842540738209767 8.600846201429473 7.021617385362061 9 73.89795029233453 7.028984494775068 10.82088651730064 8.25217869558977 10 42.99724495511779 23.488758172093135 18.52961387455337 14.984382998235704 11 30.365573751751274 23.729713457549572 24.194603465335845 21.710109325363305 12 27.03049602239601 20.55328261882957 30.81687271286183 21.59934864591259 13 24.504276098937737 24.089685665764407 31.78533005285266 19.620708182445195 14 20.14574174724972 27.69702889558139 30.678104315728906 21.47912504143999 15 17.09461527811473 25.452029321095466 36.14970728441996 21.303648116369843 16 21.05494466411697 25.335425761765464 31.153028834612208 22.45660073950536 17 21.8217591387087 24.055517520383393 28.168269859758183 25.954453481149724 18 22.03788218467819 24.466233870158508 31.53910347359209 21.956780471571214 19 23.98260854102019 25.440216542209093 27.796738910912595 22.780436005858125 20 24.566515471564863 26.638133936589508 28.07529185820093 20.7200587336447 21 23.203282682339132 25.677932839906358 29.935105927601636 21.18367855015287 22 21.428761957263145 24.987456861128717 27.821063073888297 25.76271810771984 23 21.502115503573684 25.135497654591806 29.17527750503948 24.18710933679503 24 22.946894572853726 23.92221094574632 28.235335959242104 24.895558522157852 25 20.856286748221414 26.704755469126095 27.293235088271945 25.145722694380545 26 20.49574295393143 26.571194856233397 28.551423058798424 24.381639131036742 27 21.12359850269852 26.720696369666307 29.92202295743716 22.23368217019801 28 18.075266454375363 26.260061502661685 30.28193165608809 25.382740386874858 29 21.712903746175137 24.043196664985782 30.221343532122503 24.02255605671658 30 21.91130762381507 24.720653183162852 28.79345800684125 24.574581186180826 31 21.52516947527128 27.968722809967954 25.400396045640512 25.10571166912025 32 24.76460180138527 27.013983535780657 24.97450091009205 23.246913752742028 33 23.69452915914608 25.876908303621445 25.388964324137568 25.03959821309491 34 20.90639579414264 24.91969215644184 28.20529593551493 25.968616113900595 35 21.91422906375471 25.41678151312806 28.37829598759277 24.290693435524453 36 24.96002072952166 24.798325379818948 27.942175812255567 22.299478078403826 37 22.480289806842013 27.037926641372923 28.29554302582426 22.186240525960805 38 22.705050153502615 28.539483260784245 24.452960371302314 24.30250621441083 39 23.982989598403623 23.19216850865572 27.198415309361433 25.62642658357922 40 23.11824337627003 22.548245040220607 29.309282684879516 25.024228898629847 41 20.070609933149832 25.289444837498078 27.47557104624385 27.164374183108237 42 22.628902186380248 24.25893865357184 29.39133704144507 23.72082211860284 43 24.369508804330845 23.13812186977237 28.921683816365906 23.570685509530882 44 21.93194823208427 23.30686678106856 29.052640537138487 25.708544449708683 45 22.144324213783353 22.756048333318514 26.915289673471925 28.184337779426205 46 23.016818602713382 24.3811310545255 28.20447031118416 24.397580031576954 47 19.8382284388206 24.37674889461604 31.14680489734949 24.638217769213867 48 21.248839362719632 23.462846270019803 29.17070481643831 26.11760955082226 49 22.86458617803255 21.88819014255357 31.03864811001889 24.208575569394995 50 21.241218215051006 22.013494512138582 29.881249817410005 26.864037455400407 51 20.87286274440068 22.696031795428073 26.317601167559822 30.113504292611427 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1334.0 1 1650.0 2 1966.0 3 2575.0 4 3184.0 5 2564.5 6 1945.0 7 2011.0 8 2077.0 9 2235.5 10 2394.0 11 2444.0 12 2494.0 13 2561.5 14 2629.0 15 2809.5 16 2990.0 17 2860.0 18 2730.0 19 2877.0 20 3024.0 21 3785.0 22 4546.0 23 5254.5 24 5963.0 25 6731.5 26 9469.0 27 11438.0 28 13216.0 29 14994.0 30 16312.5 31 17631.0 32 22150.0 33 26669.0 34 31099.0 35 35529.0 36 39716.5 37 43904.0 38 46787.5 39 49671.0 40 56932.0 41 64193.0 42 75228.5 43 86264.0 44 96439.0 45 106614.0 46 127049.0 47 147484.0 48 166321.5 49 185159.0 50 181559.0 51 177959.0 52 148708.0 53 119457.0 54 102491.5 55 85526.0 56 78632.5 57 71739.0 58 68287.0 59 64835.0 60 62072.5 61 59310.0 62 53420.0 63 47530.0 64 41909.0 65 36288.0 66 32442.5 67 28597.0 68 24078.0 69 19559.0 70 15669.5 71 11780.0 72 9701.0 73 7622.0 74 5987.0 75 3521.5 76 2691.0 77 1990.0 78 1289.0 79 1138.5 80 988.0 81 680.5 82 373.0 83 307.0 84 241.0 85 150.0 86 59.0 87 41.0 88 23.0 89 17.5 90 12.0 91 9.0 92 6.0 93 5.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1574566.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.731166774698938 #Duplication Level Percentage of deduplicated Percentage of total 1 64.49841531161809 12.726289892173323 2 12.90550461310798 5.0928132766576 3 6.142369547634837 3.6358835380864507 4 3.619069338344804 2.8563384273632266 5 2.3201978083055073 2.289010495298345 6 1.5252619561446346 1.8057118819075995 7 1.1179638175453748 1.5441111372446814 8 0.823885382647028 1.3004975910596128 9 0.6408250838185531 1.1379803942010869 >10 4.100511547645161 16.356846807048097 >50 1.2297137564313965 18.102305404765545 >100 1.0626002879850287 29.184867339710273 >500 0.0074922767082437666 0.9306305563372492 >1k 0.005212018579647838 1.6490266975197503 >5k 9.772534836839696E-4 1.3876865606271989 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC 8080 0.5131572763542462 No Hit CCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC 7804 0.49562863671640306 No Hit CTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGCT 5706 0.36238557164323376 No Hit TCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC 2971 0.18868691436243384 No Hit ACTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC 2393 0.15197838642521178 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGC 2168 0.13768873454653535 No Hit GAATCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTC 2153 0.13673609108795695 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCG 2026 0.12867037647199292 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCC 1658 0.10529885695486883 No Hit CGCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTG 1588 0.10085318748150283 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.350956390522849E-5 0.0 0.0 0.37711979046924676 0.0 2 1.2701912781045699E-4 0.0 0.0 1.7842376883534892 0.0 3 1.2701912781045699E-4 0.0 0.0 2.4670290098986007 0.0 4 1.2701912781045699E-4 0.0 0.0 3.310753566379561 0.0 5 1.2701912781045699E-4 0.0 0.0 5.538669068174976 0.0 6 1.2701912781045699E-4 0.0 0.0 6.601882677512407 0.0 7 1.2701912781045699E-4 0.0 0.0 7.811422322087483 0.0 8 1.2701912781045699E-4 0.0 0.0 9.512843539108554 0.0 9 1.2701912781045699E-4 0.0 0.0 10.092495328871575 0.0 10 1.2701912781045699E-4 0.0 0.0 11.547435928376455 0.0 11 1.2701912781045699E-4 0.0 0.0 13.702315431680857 0.0 12 1.2701912781045699E-4 0.0 0.0 15.488712445207124 0.0 13 1.2701912781045699E-4 0.0 0.0 16.12526880422923 0.0 14 1.2701912781045699E-4 0.0 0.0 16.37562350514364 0.0 15 1.2701912781045699E-4 0.0 0.0 16.845975335425763 0.0 16 1.9052869171568547E-4 0.0 0.0 17.847775196466834 0.0 17 1.9052869171568547E-4 0.0 0.0 19.032546111118872 0.0 18 1.9052869171568547E-4 0.0 0.0 20.452873998295402 0.0 19 1.9052869171568547E-4 0.0 0.0 21.297614707798846 0.0 20 1.9052869171568547E-4 0.0 0.0 22.048043714903027 0.0 21 1.9052869171568547E-4 0.0 0.0 22.964359702927663 0.0 22 1.9052869171568547E-4 0.0 0.0 23.92087724490431 0.0 23 1.9052869171568547E-4 0.0 0.0 24.813123108208867 0.0 24 1.9052869171568547E-4 0.0 0.0 25.547992272156264 0.0 25 2.5403825562091397E-4 0.0 0.0 26.185628293764758 0.0 26 2.5403825562091397E-4 0.0 0.0 26.75486451504732 0.0 27 2.5403825562091397E-4 0.0 0.0 27.329117991878398 0.0 28 2.5403825562091397E-4 0.0 0.0 27.91975693619702 0.0 29 2.5403825562091397E-4 0.0 0.0 28.50582319191447 0.0 30 2.5403825562091397E-4 0.0 0.0 29.169561644288013 0.0 31 2.5403825562091397E-4 0.0 0.0 29.781793840334416 0.0 32 2.5403825562091397E-4 0.0 0.0 30.34594929650456 6.350956390522849E-5 33 3.8105738343137093E-4 0.0 0.0 30.945797127589444 6.350956390522849E-5 34 3.8105738343137093E-4 0.0 0.0 31.510841717654262 6.350956390522849E-5 35 3.8105738343137093E-4 0.0 0.0 32.12853573619651 6.350956390522849E-5 36 3.8105738343137093E-4 0.0 0.0 32.68824552289329 6.350956390522849E-5 37 3.8105738343137093E-4 0.0 0.0 33.27558196988885 6.350956390522849E-5 38 3.8105738343137093E-4 0.0 0.0 33.86850725850806 6.350956390522849E-5 39 3.8105738343137093E-4 0.0 0.0 34.6111880988158 6.350956390522849E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTTT 30 2.1660162E-6 45.000004 13 ACCGCGT 30 2.1660162E-6 45.000004 4 ACGGGTA 260 0.0 45.000004 5 CGCTATA 30 2.1660162E-6 45.000004 6 CTCGCTA 30 2.1660162E-6 45.000004 37 TTACGTA 30 2.1660162E-6 45.000004 43 GCGTAGT 30 2.1660162E-6 45.000004 10 ACGACTT 30 2.1660162E-6 45.000004 34 TACGTAA 30 2.1660162E-6 45.000004 44 TCAAACG 30 2.1660162E-6 45.000004 1 ACTATCC 25 3.891465E-5 45.0 26 AATCCCG 20 7.034082E-4 45.0 42 TCGCACA 20 7.034082E-4 45.0 19 CGTATCG 20 7.034082E-4 45.0 30 CGTATAG 25 3.891465E-5 45.0 2 ATAGCCG 45 3.8562575E-10 45.0 1 ATTCGTC 40 6.8175723E-9 45.0 25 TAAGTCG 25 3.891465E-5 45.0 18 CGTTAGT 25 3.891465E-5 45.0 15 CCCGTTA 25 3.891465E-5 45.0 33 >>END_MODULE