##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935027.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 620485 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.2154975543325 33.0 31.0 34.0 30.0 34.0 2 32.39309572350661 34.0 31.0 34.0 30.0 34.0 3 32.398272319234145 34.0 31.0 34.0 30.0 34.0 4 35.943598958878944 37.0 35.0 37.0 35.0 37.0 5 35.84539029952376 37.0 35.0 37.0 35.0 37.0 6 35.80122323666164 37.0 35.0 37.0 35.0 37.0 7 36.072718921488836 37.0 35.0 37.0 35.0 37.0 8 35.82298202212785 37.0 35.0 37.0 35.0 37.0 9 37.58200601142654 39.0 38.0 39.0 35.0 39.0 10 37.40255928829867 39.0 37.0 39.0 35.0 39.0 11 37.30251335648727 39.0 37.0 39.0 34.0 39.0 12 37.05439132291675 39.0 35.0 39.0 34.0 39.0 13 36.84617355778141 39.0 35.0 39.0 33.0 39.0 14 37.92174992143243 40.0 36.0 41.0 33.0 41.0 15 38.04810914043047 40.0 36.0 41.0 33.0 41.0 16 38.137321611320175 40.0 36.0 41.0 34.0 41.0 17 38.18239119398535 40.0 36.0 41.0 34.0 41.0 18 38.1975196821841 40.0 36.0 41.0 34.0 41.0 19 38.15388607299129 40.0 36.0 41.0 34.0 41.0 20 38.103180576484526 40.0 36.0 41.0 34.0 41.0 21 38.02454531535815 40.0 36.0 41.0 34.0 41.0 22 37.94933801784088 40.0 35.0 41.0 34.0 41.0 23 37.757489705633496 39.0 35.0 41.0 34.0 41.0 24 37.56435369106425 39.0 35.0 41.0 33.0 41.0 25 37.492808045319386 39.0 35.0 41.0 33.0 41.0 26 37.61681426625946 39.0 35.0 41.0 33.0 41.0 27 37.695404401395685 39.0 35.0 41.0 34.0 41.0 28 37.699119237370766 39.0 36.0 41.0 34.0 41.0 29 37.74014037406223 40.0 36.0 41.0 34.0 41.0 30 37.67638701983126 40.0 36.0 41.0 34.0 41.0 31 37.57176563494686 39.0 35.0 41.0 33.0 41.0 32 37.44611553865121 39.0 35.0 41.0 33.0 41.0 33 37.337253922334945 39.0 35.0 41.0 33.0 41.0 34 37.254961844363685 39.0 35.0 41.0 33.0 41.0 35 37.181254986019 39.0 35.0 41.0 33.0 41.0 36 37.10024094055456 39.0 35.0 41.0 33.0 41.0 37 37.04154169722072 39.0 35.0 41.0 33.0 41.0 38 36.96955446142937 39.0 35.0 41.0 32.0 41.0 39 36.90703240207257 39.0 35.0 41.0 32.0 41.0 40 36.8277782702241 39.0 35.0 41.0 32.0 41.0 41 36.778745658638 39.0 35.0 41.0 32.0 41.0 42 36.74105578700533 39.0 35.0 41.0 32.0 41.0 43 36.635372329709824 39.0 35.0 41.0 32.0 41.0 44 36.50559159367269 39.0 35.0 41.0 31.0 41.0 45 36.53044473274938 39.0 35.0 41.0 31.0 41.0 46 36.420919119720864 38.0 35.0 40.0 31.0 41.0 47 36.35291264091799 38.0 35.0 40.0 31.0 41.0 48 36.34058679903624 38.0 35.0 40.0 31.0 41.0 49 36.2876459543744 38.0 35.0 40.0 31.0 41.0 50 36.19064925018333 38.0 35.0 40.0 31.0 41.0 51 35.169878401572966 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 6.0 10 10.0 11 4.0 12 7.0 13 11.0 14 16.0 15 34.0 16 53.0 17 98.0 18 150.0 19 286.0 20 541.0 21 880.0 22 1325.0 23 1912.0 24 2520.0 25 3172.0 26 3799.0 27 4402.0 28 5144.0 29 6255.0 30 8026.0 31 10570.0 32 14168.0 33 20562.0 34 41455.0 35 68767.0 36 42979.0 37 68361.0 38 127835.0 39 187014.0 40 120.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.26345520036745 22.910142872108107 27.075916420219663 11.75048550730477 2 29.04228144113073 25.76178312126804 27.201141042893866 17.994794394707366 3 29.442129946735214 25.38836555275309 28.0382281602295 17.1312763402822 4 28.974592455901433 26.63432637372378 26.342619080235625 18.048462090139164 5 24.55031144991418 29.53173727003876 25.02203921126216 20.895912068784902 6 25.984995608274176 33.53554074635164 23.851664423797516 16.62779922157667 7 77.36061306880909 6.635776851978695 10.099680088962666 5.903929990249563 8 77.42781856128673 5.1906170173332145 9.783798157892615 7.597766263487434 9 71.84895686438834 7.03562535758318 12.846080082516096 8.269337695512382 10 41.41179883478247 25.503436827642894 18.71342578789173 14.37133854968291 11 30.966099099897658 23.258418817537894 25.64767883188151 20.127803250682934 12 28.984906967936375 20.838054102838907 30.634906565025744 19.542132364198974 13 21.47126844323392 29.3393071548869 30.972706834170044 18.216717567709132 14 16.66857377696479 32.38402217620088 30.345294406794686 20.602109640039647 15 14.182937540794702 25.63945945510367 41.10929353650773 19.0683094675939 16 15.94994238378043 26.30248918184968 34.86707978436223 22.880488650007656 17 16.835539940530392 24.57464725174662 28.57651675705295 30.01329605067004 18 19.515862591359983 25.681039831744524 31.717769164443943 23.08532841245155 19 20.572777746440284 27.418229288379255 28.03887281723168 23.97012014794878 20 23.17719203526274 27.86884453290571 28.30108705286993 20.65287637896162 21 20.46205790631522 28.572971143540936 29.219078623979627 21.74589232616421 22 17.58543719832067 26.627396310950306 26.87623391379324 28.91093257693578 23 17.228780711862495 28.043063087745878 28.89159286687027 25.836563333521354 24 22.38764837183816 23.80218699887991 30.50081790857152 23.309346720710412 25 16.736101597943545 28.175378937444094 28.502381201801818 26.586138262810543 26 17.59687986010943 32.229465659927314 27.75135579425772 22.422298685705535 27 20.95280304922762 30.2116892430921 27.271569820382442 21.56393788729784 28 16.597500342474035 26.63432637372378 31.671192696036165 25.096980587766023 29 17.561746053490417 26.56486458173848 31.1114692538901 24.761920110881004 30 23.461002280474144 28.133637396552697 26.20675761702539 22.198602705947767 31 25.15677252471857 28.02614084143855 22.998460881407286 23.818625752435597 32 25.68716407326527 29.149294503493234 23.20088318009299 21.962658243148507 33 24.30082919006906 29.607000975043718 22.91449430687285 23.177675528014376 34 21.11622359928121 26.94779084103564 27.198401250634586 24.737584309048565 35 22.72254768447263 27.308798762258558 26.113604680209836 23.85504887305898 36 25.968234526217394 28.65290861181173 24.402362667913003 20.976494194057874 37 22.793137626211752 26.635776851978694 28.78280699775176 21.788278524057795 38 20.317332409324965 28.833573736673728 25.796111106634328 25.052982747366983 39 22.638258781437102 28.44258926484927 28.077713401613252 20.84143855210037 40 26.523767697849266 25.18997236033103 26.515387156820875 21.770872784998833 41 22.95107859174678 26.258330177200094 24.99012868965406 25.800462541399067 42 24.719211584486327 26.13407254002917 25.354359895887896 23.792355979596604 43 24.91534847740074 24.832187724119038 27.604051669258723 22.648412129221494 44 20.617581408092057 25.697962078051845 28.15442758487312 25.530028928982972 45 22.39812404812365 24.982231641377307 25.662344778681195 26.957299531817853 46 25.85396907258032 25.358389002151544 26.67091065859771 22.116731266670428 47 21.438552100373094 25.12325036060501 30.814927032885564 22.62327050613633 48 22.568313496700164 21.469012143726278 30.352224469568164 25.6104498900054 49 21.212438656857135 21.50527410009912 33.16083386383232 24.121453379211424 50 20.580674794717034 22.427133613221915 31.23959483307413 25.752596758986922 51 20.134572149205862 23.313536991224606 26.395642118665236 30.15624874090429 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 921.0 1 1013.5 2 1106.0 3 1205.0 4 1304.0 5 1097.0 6 890.0 7 970.5 8 1051.0 9 1101.0 10 1151.0 11 1267.0 12 1383.0 13 1463.0 14 1543.0 15 1513.0 16 1483.0 17 1662.5 18 1842.0 19 1838.5 20 1835.0 21 2006.5 22 2178.0 23 2231.5 24 2285.0 25 2236.0 26 2922.0 27 3657.0 28 4398.0 29 5139.0 30 7225.0 31 9311.0 32 9611.5 33 9912.0 34 11794.5 35 13677.0 36 13995.0 37 14313.0 38 16815.5 39 19318.0 40 22728.0 41 26138.0 42 33612.5 43 41087.0 44 46630.0 45 52173.0 46 61601.0 47 71029.0 48 76702.0 49 82375.0 50 80143.5 51 77912.0 52 62975.5 53 48039.0 54 39856.0 55 31673.0 56 26777.5 57 21882.0 58 20062.0 59 18242.0 60 17602.5 61 16963.0 62 14436.0 63 11909.0 64 10022.0 65 8135.0 66 7264.5 67 6394.0 68 5317.0 69 4240.0 70 3350.5 71 2461.0 72 1933.0 73 1405.0 74 1094.5 75 655.5 76 527.0 77 461.5 78 396.0 79 275.0 80 154.0 81 99.5 82 45.0 83 35.0 84 25.0 85 13.0 86 1.0 87 3.5 88 6.0 89 4.5 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 620485.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.815883728605336 #Duplication Level Percentage of deduplicated Percentage of total 1 65.5144819755533 14.94770803294034 2 12.752499621230207 5.819190972141439 3 6.109328739935204 4.181692025705658 4 3.6103889777482987 3.294968605253738 5 2.2591280747325073 2.577200174056246 6 1.5308355241480451 2.0956419195948244 7 1.0912573292085175 1.7428600238846952 8 0.8094386646341983 1.477444676618515 9 0.586183172986615 1.2036858406674802 >10 3.8117507111964732 17.720404420709936 >50 1.2973794058889134 21.692457292543704 >100 0.6137985992734596 18.872902490248233 >500 0.008544760082693174 1.3966990858734758 >1k 0.004272380041346587 2.095779714757222 >5k 7.120633402244311E-4 0.8813647250044907 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 5425 0.8743160592117457 No Hit GCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 4316 0.6955849053562939 No Hit CTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGCT 3190 0.5141139592415611 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 1945 0.3134644673118609 No Hit ACTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTGC 1389 0.22385714400831608 No Hit CGCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTG 1032 0.1663215065634141 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGC 1028 0.16567684956123033 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCG 956 0.15407302352192237 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTC 903 0.14553131824298735 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCC 819 0.13199352119712807 No Hit ACCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTG 786 0.1266751009291119 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 762 0.12280715891600925 No Hit GCCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTG 733 0.11813339565017687 No Hit AAAACTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTC 686 0.11055867587451752 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTC 667 0.10749655511414459 No Hit GGCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCTG 649 0.10459559860431758 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5389332538256364 0.0 2 0.0 0.0 0.0 2.752201906573084 0.0 3 0.0 0.0 0.0 3.6993642070315964 0.0 4 0.0 0.0 0.0 4.824935332844468 0.0 5 0.0 0.0 0.0 7.776497417342885 0.0 6 0.0 0.0 0.0 9.26275413587758 0.0 7 0.0 0.0 0.0 10.902922713683651 0.0 8 0.0 0.011764990289853904 0.0 13.195000684948065 0.0 9 0.0 0.011764990289853904 0.0 13.993730710653763 0.0 10 0.0 0.011764990289853904 0.0 15.875001007276566 0.0 11 0.0 0.011764990289853904 0.0 18.619789358324535 0.0 12 0.0 0.011764990289853904 0.0 20.82419397729196 0.0 13 0.0 0.011764990289853904 0.0 21.630015230021677 0.0 14 0.0 0.011764990289853904 0.0 21.92784676503058 0.0 15 0.0 0.011764990289853904 0.0 22.500624511470864 0.0 16 0.0 0.011764990289853904 0.0 23.7667308637598 0.0 17 0.0 0.011764990289853904 0.0 25.245412862518837 0.0 18 0.0 0.011764990289853904 0.0 27.049646647380676 0.0 19 1.611642505459439E-4 0.011764990289853904 0.0 28.05128246452372 0.0 20 1.611642505459439E-4 0.011764990289853904 0.0 28.89368800212737 0.0 21 1.611642505459439E-4 0.011764990289853904 0.0 29.934486732153072 0.0 22 1.611642505459439E-4 0.011764990289853904 0.0 30.96126417238128 0.0 23 1.611642505459439E-4 0.011764990289853904 0.0 32.05685874759261 0.0 24 1.611642505459439E-4 0.011764990289853904 0.0 32.7924123870843 0.0 25 1.611642505459439E-4 0.011764990289853904 0.0 33.47687695915292 0.0 26 1.611642505459439E-4 0.011764990289853904 0.0 34.10412822227774 0.0 27 1.611642505459439E-4 0.011764990289853904 0.0 34.65708276590087 0.0 28 1.611642505459439E-4 0.011764990289853904 0.0 35.282077729518036 0.0 29 1.611642505459439E-4 0.011764990289853904 0.0 35.93092500221601 0.0 30 1.611642505459439E-4 0.011764990289853904 0.0 36.671313569224075 0.0 31 1.611642505459439E-4 0.011764990289853904 0.0 37.35287718478287 0.0 32 1.611642505459439E-4 0.011764990289853904 0.0 37.879884284068105 0.0 33 1.611642505459439E-4 0.011764990289853904 0.0 38.4446038179811 0.0 34 1.611642505459439E-4 0.011764990289853904 0.0 38.97322255977179 0.0 35 1.611642505459439E-4 0.011764990289853904 0.0 39.59853985189005 0.0 36 1.611642505459439E-4 0.011764990289853904 0.0 40.13666728446296 0.0 37 1.611642505459439E-4 0.011764990289853904 0.0 40.66174041274164 0.0 38 1.611642505459439E-4 0.011764990289853904 0.0 41.18326792750832 0.0 39 1.611642505459439E-4 0.011764990289853904 0.0 41.70495660652554 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCTA 20 7.0307753E-4 45.0 13 ATTTACC 20 7.0307753E-4 45.0 34 CGTGGTT 20 7.0307753E-4 45.0 18 AACGTAG 20 7.0307753E-4 45.0 1 AGCCGTA 20 7.0307753E-4 45.0 13 GGAATCG 20 7.0307753E-4 45.0 8 ACTATCG 25 3.888723E-5 45.0 1 AATCCCG 25 3.888723E-5 45.0 10 GTCGCGA 40 6.8066583E-9 45.0 16 TACCCGT 25 3.888723E-5 45.0 41 CAAACGA 20 7.0307753E-4 45.0 6 TACCCAC 25 3.888723E-5 45.0 31 ATCTACG 35 1.2107193E-7 45.0 2 GGTCGAT 25 3.888723E-5 45.0 16 TTTACGT 25 3.888723E-5 45.0 15 CGCGGAA 20 7.0307753E-4 45.0 25 CGTGCCG 20 7.0307753E-4 45.0 36 CGTGCAT 25 3.888723E-5 45.0 39 CCCTAGT 35 1.2107193E-7 45.0 12 ACGCACT 20 7.0307753E-4 45.0 31 >>END_MODULE