##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935025.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 840588 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.289770969844916 33.0 31.0 34.0 30.0 34.0 2 32.46803071183505 34.0 31.0 34.0 31.0 34.0 3 32.479677321113314 34.0 31.0 34.0 31.0 34.0 4 36.00640860921165 37.0 35.0 37.0 35.0 37.0 5 35.91201040224224 37.0 35.0 37.0 35.0 37.0 6 35.85073186864433 37.0 35.0 37.0 35.0 37.0 7 36.110871199684034 37.0 35.0 37.0 35.0 37.0 8 35.84440415518661 37.0 35.0 37.0 35.0 37.0 9 37.586328855515426 39.0 38.0 39.0 35.0 39.0 10 37.445082489876135 39.0 37.0 39.0 35.0 39.0 11 37.363376588768816 39.0 37.0 39.0 35.0 39.0 12 37.14752768300285 39.0 37.0 39.0 34.0 39.0 13 36.98946689698164 39.0 37.0 39.0 33.0 39.0 14 38.01513107491423 40.0 37.0 41.0 33.0 41.0 15 38.14518051649559 40.0 37.0 41.0 33.0 41.0 16 38.248821063350896 40.0 37.0 41.0 34.0 41.0 17 38.30430603339567 40.0 37.0 41.0 34.0 41.0 18 38.30628678972339 40.0 37.0 41.0 34.0 41.0 19 38.28928559532137 40.0 37.0 41.0 34.0 41.0 20 38.248747305457606 40.0 37.0 41.0 34.0 41.0 21 38.163465336169445 40.0 36.0 41.0 34.0 41.0 22 38.09302059986581 40.0 36.0 41.0 34.0 41.0 23 37.91477513359696 40.0 36.0 41.0 34.0 41.0 24 37.70801867264343 40.0 35.0 41.0 33.0 41.0 25 37.649433491793836 39.0 35.0 41.0 33.0 41.0 26 37.764905042660615 40.0 35.0 41.0 34.0 41.0 27 37.810128148391364 40.0 36.0 41.0 34.0 41.0 28 37.75735318610306 40.0 36.0 41.0 34.0 41.0 29 37.76981589078122 40.0 36.0 41.0 34.0 41.0 30 37.73460720352896 40.0 36.0 41.0 34.0 41.0 31 37.58284438987947 40.0 35.0 41.0 33.0 41.0 32 37.48534954103556 39.0 35.0 41.0 33.0 41.0 33 37.45738578233332 39.0 35.0 41.0 33.0 41.0 34 37.33014865784427 39.0 35.0 41.0 33.0 41.0 35 37.272067885813264 39.0 35.0 41.0 33.0 41.0 36 37.203434976468856 39.0 35.0 41.0 33.0 41.0 37 37.12563586441872 39.0 35.0 41.0 33.0 41.0 38 37.05973080748238 39.0 35.0 41.0 32.0 41.0 39 37.020009802661946 39.0 35.0 41.0 32.0 41.0 40 36.96060733676902 39.0 35.0 41.0 32.0 41.0 41 36.90100620042161 39.0 35.0 41.0 32.0 41.0 42 36.8967484665496 39.0 35.0 41.0 32.0 41.0 43 36.82825712477456 39.0 35.0 41.0 32.0 41.0 44 36.702623639642724 39.0 35.0 41.0 32.0 41.0 45 36.68133140135239 39.0 35.0 41.0 32.0 41.0 46 36.587555377902135 39.0 35.0 40.0 31.0 41.0 47 36.53264500563891 38.0 35.0 40.0 31.0 41.0 48 36.50202953170876 38.0 35.0 40.0 31.0 41.0 49 36.45098669026919 38.0 35.0 40.0 31.0 41.0 50 36.374696046101064 38.0 35.0 40.0 31.0 41.0 51 35.34128015151299 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 16.0 10 16.0 11 14.0 12 12.0 13 16.0 14 14.0 15 29.0 16 45.0 17 114.0 18 179.0 19 368.0 20 566.0 21 1004.0 22 1458.0 23 2169.0 24 2915.0 25 3755.0 26 4664.0 27 5556.0 28 6821.0 29 8257.0 30 10541.0 31 13780.0 32 18927.0 33 28099.0 34 56825.0 35 80690.0 36 60098.0 37 96801.0 38 177121.0 39 259509.0 40 205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.395427962331134 23.18246275226389 23.975122176381294 11.446987109023683 2 31.67960998729461 24.646794862643766 24.977158845950694 18.696436304110932 3 31.649868901292905 24.600755661513134 25.857613955945126 17.891761481248842 4 27.96911209772207 26.29064416812993 25.229125326557124 20.511118407590878 5 25.543191194735115 29.45057507363893 24.837375741742683 20.16885798988327 6 27.573912546931435 33.10884761619248 23.615611928792703 15.70162790808339 7 80.07775509524285 5.955236096637116 8.64418716422314 5.322821643896891 8 78.99993813854111 5.060505265361866 9.056398616206751 6.883157979890267 9 73.40706743374875 7.37709793620656 11.37727400343569 7.838560626608992 10 41.47227892855953 25.570909886888703 17.699990958709854 15.25682022584191 11 32.217566750893425 23.51675255892304 23.593841453839456 20.671839236344084 12 28.579399182477026 21.501853464479627 29.65519374533065 20.263553607712698 13 24.842253279846965 25.70831370421657 30.944648270020508 18.504784745915952 14 19.335155867083518 29.343507164032793 30.636768547730874 20.684568421152814 15 17.396869810180494 24.951105654613198 36.92236862767491 20.729655907531395 16 19.760334432563873 26.19380719210838 31.946447010901892 22.099411364425855 17 20.439144979466754 24.363778688251557 27.730826516676423 27.466249815605266 18 21.70789970829943 24.881154620337192 30.879574773848784 22.531370897514595 19 23.149152735941982 26.454458069827314 27.26936382627399 23.127025367956715 20 24.764331634522502 27.609482885789472 27.467439459045334 20.158746020642692 21 23.06825698201735 26.408180940008663 29.28652324325353 21.237038834720458 22 21.35564628569525 25.679762261654936 27.82088252508958 25.143708927560233 23 19.97351853702408 26.3652348118222 29.437488995798176 24.223757655355538 24 22.296892175477165 24.454905375760777 28.83505355774767 24.413148891014387 25 20.651496333518917 26.586389527330866 27.813387771417155 24.948726367733062 26 19.9214121543491 29.413815091340823 27.08401737831137 23.580755375998706 27 22.61797693995156 26.7248640237548 28.370378830057057 22.286780206236585 28 18.526793149557214 27.31195306142843 30.167097317591974 23.994156471422386 29 20.46293784826812 27.894402489685792 28.735242473125954 22.90741718892014 30 25.347613813187913 25.376165255749545 27.218803980071094 22.05741695099145 31 22.650216277177403 27.766991677254495 27.00906984158708 22.573722203981024 32 23.91445036093782 29.022065506526385 24.386262949268843 22.67722118326695 33 25.106592052230102 25.648117746149126 25.2374528306376 24.007837370983168 34 20.319109956363878 26.214863880997584 29.940232313570974 23.525793849067558 35 20.91357478336593 27.18037849695689 25.776123380300458 26.12992333937672 36 24.891861411297807 25.361413677092703 26.263996155072398 23.482728756537092 37 22.004120924876396 26.176200469195372 29.58952542743889 22.230153178489342 38 21.14032082304292 27.535724992505244 25.4399301441372 25.884024040314635 39 23.395170999348075 24.35104950344283 27.76782442766254 24.485955069546556 40 24.423974646319007 22.677102218922947 29.228944500754235 23.669978634003815 41 20.29448433715447 24.292994903567504 27.397250496081316 28.01527026319671 42 22.210761990416234 23.357221373609903 28.077012757736252 26.355003878237614 43 23.46000656683179 23.41396736570115 28.43271614631663 24.693309921150433 44 22.127367985267455 24.108719134700948 28.05940603482324 25.704506845208353 45 22.582168672405505 24.29228111750346 26.452435675979196 26.673114534111836 46 23.746948564576225 23.88078345158389 28.79603325291344 23.576234730926444 47 19.590929206698167 24.65119654337202 31.408133354271055 24.34974089565875 48 20.566079934522026 23.475828824584696 29.5478879070365 26.410203333856774 49 22.608578756775017 21.122238242753884 31.39944895715856 24.869734043312537 50 20.740838555868034 22.569796380628798 30.30795110089604 26.381413962607127 51 19.934141339157826 23.051007152136364 26.786249625262315 30.228601883443496 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 613.0 1 780.5 2 948.0 3 1328.5 4 1709.0 5 1350.0 6 991.0 7 1049.5 8 1108.0 9 1188.5 10 1269.0 11 1317.5 12 1366.0 13 1366.0 14 1366.0 15 1448.5 16 1531.0 17 1453.0 18 1375.0 19 1629.0 20 1883.0 21 2208.0 22 2533.0 23 2455.5 24 2378.0 25 3500.5 26 4648.0 27 4673.0 28 5587.0 29 6501.0 30 8826.5 31 11152.0 32 12421.0 33 13690.0 34 15630.5 35 17571.0 36 19193.5 37 20816.0 38 22998.0 39 25180.0 40 30946.5 41 36713.0 42 41664.5 43 46616.0 44 54080.0 45 61544.0 46 72943.5 47 84343.0 48 93746.5 49 103150.0 50 100472.5 51 97795.0 52 83470.0 53 69145.0 54 58792.0 55 48439.0 56 43197.0 57 37955.0 58 34970.0 59 31985.0 60 29715.5 61 27446.0 62 25142.5 63 22839.0 64 19369.0 65 15899.0 66 13418.0 67 10937.0 68 9634.0 69 8331.0 70 6818.0 71 5305.0 72 4367.0 73 3429.0 74 2947.5 75 2055.0 76 1644.0 77 1212.5 78 781.0 79 476.5 80 172.0 81 225.5 82 279.0 83 168.5 84 58.0 85 43.0 86 28.0 87 16.5 88 5.0 89 4.5 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 1.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 840588.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.894120397471614 #Duplication Level Percentage of deduplicated Percentage of total 1 65.98791507098709 15.107352724133097 2 12.861297934078575 5.888962067410956 3 5.929350334124447 4.072417812847009 4 3.2827674740552495 3.0062429515169864 5 2.112098800257196 2.4177322112221797 6 1.4273695155902055 1.9607021724961742 7 0.9918190703621004 1.5894777646564808 8 0.7763795964672475 1.4219622364529274 9 0.5559137445301968 1.1454440578095244 >10 4.037916764565451 20.268786388715025 >50 1.5626898686816686 26.100779760412983 >100 0.4655491673337223 14.222265798119718 >500 0.006305406329576374 1.0482704664355997 >1k 0.0026272526373234896 1.7496035877713294 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 4304 0.5120225366053287 TruSeq Adapter, Index 22 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 4101 0.48787277477194535 TruSeq Adapter, Index 22 (95% over 22bp) CTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGCT 3206 0.3813996868858466 TruSeq Adapter, Index 20 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 1673 0.19902734752340032 TruSeq Adapter, Index 22 (95% over 22bp) ACTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 1260 0.149895073448586 TruSeq Adapter, Index 20 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCC 939 0.1117075190223986 No Hit ACCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTG 930 0.11063683992633727 No Hit GCCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTG 927 0.11027994689431683 TruSeq Adapter, Index 22 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTG 918 0.10920926779825552 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3975788376707733 0.0 2 0.0 0.0 0.0 1.818488962488163 0.0 3 0.0 0.0 0.0 2.5697487948911952 0.0 4 0.0 0.0 0.0 3.441757436461144 0.0 5 0.0 0.0 0.0 5.720162552879651 0.0 6 0.0 0.0 0.0 6.880302835634104 0.0 7 0.0 0.0 0.0 8.060310163837695 0.0 8 0.0 0.0 0.0 9.840849500587684 0.0 9 0.0 0.0 0.0 10.479688027904276 0.0 10 0.0 0.0 0.0 12.028603786873 0.0 11 0.0 0.0 0.0 14.429661141962532 0.0 12 0.0 0.0 0.0 16.234350240545904 0.0 13 0.0 0.0 0.0 16.94742251852275 0.0 14 0.0 0.0 0.0 17.22960594250691 0.0 15 1.1896434400681428E-4 0.0 0.0 17.781838427386543 0.0 16 1.1896434400681428E-4 0.0 0.0 18.876786249625262 0.0 17 1.1896434400681428E-4 0.0 0.0 20.144232370673862 0.0 18 4.758573760272571E-4 0.0 0.0 21.586912970444498 0.0 19 4.758573760272571E-4 0.0 0.0 22.417522020300076 0.0 20 5.948217200340714E-4 0.0 0.0 23.223743379634257 0.0 21 5.948217200340714E-4 0.0 0.0 24.177956382912914 0.0 22 5.948217200340714E-4 0.0 0.0 25.180944767234365 0.0 23 5.948217200340714E-4 0.0 0.0 26.12242858570429 0.0 24 5.948217200340714E-4 0.0 0.0 26.85786616035442 0.0 25 5.948217200340714E-4 0.0 0.0 27.49254093563077 0.0 26 5.948217200340714E-4 0.0 0.0 28.072611077008 0.0 27 5.948217200340714E-4 0.0 0.0 28.673262049898405 0.0 28 5.948217200340714E-4 0.0 0.0 29.24881154620337 0.0 29 5.948217200340714E-4 0.0 0.0 29.851128019909872 0.0 30 5.948217200340714E-4 0.0 0.0 30.5219679557643 0.0 31 7.137860640408857E-4 0.0 0.0 31.156523766696644 0.0 32 7.137860640408857E-4 0.0 0.0 31.74706277034647 0.0 33 8.327504080477E-4 0.0 0.0 32.31095376093877 0.0 34 8.327504080477E-4 0.0 0.0 32.93634931738259 0.0 35 9.517147520545142E-4 0.0 0.0 33.54627950910553 0.0 36 9.517147520545142E-4 0.0 0.0 34.12301864885057 0.0 37 9.517147520545142E-4 0.0 0.0 34.67858213536239 0.0 38 9.517147520545142E-4 0.0 0.0 35.279827929972825 0.0 39 9.517147520545142E-4 0.0 0.0 36.02954122590377 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 20 7.0322026E-4 45.000004 25 CTATGCG 20 7.0322026E-4 45.000004 1 GCCTTCG 20 7.0322026E-4 45.000004 30 TACCCGT 20 7.0322026E-4 45.000004 35 CGTATCG 20 7.0322026E-4 45.000004 13 CGACGGT 20 7.0322026E-4 45.000004 28 TTAGCCG 20 7.0322026E-4 45.000004 30 CGCATGT 20 7.0322026E-4 45.000004 38 TATATCG 20 7.0322026E-4 45.000004 29 GTCTACG 20 7.0322026E-4 45.000004 38 AACGGTC 40 6.8121153E-9 45.000004 15 TAGCACG 65 0.0 45.000004 1 ATATCGA 20 7.0322026E-4 45.000004 30 TGCGCAC 20 7.0322026E-4 45.000004 10 CTACGCA 20 7.0322026E-4 45.000004 40 TCGCTCA 20 7.0322026E-4 45.000004 19 AGCGCGA 20 7.0322026E-4 45.000004 40 TGTTACG 20 7.0322026E-4 45.000004 1 AACGAAG 40 6.8121153E-9 45.000004 1 TCGTATC 20 7.0322026E-4 45.000004 12 >>END_MODULE