##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935022.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 742264 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.060749275190496 33.0 31.0 34.0 30.0 34.0 2 32.24042793399653 34.0 31.0 34.0 30.0 34.0 3 32.25195617731696 34.0 31.0 34.0 30.0 34.0 4 35.82771897869222 37.0 35.0 37.0 35.0 37.0 5 35.73312864425595 37.0 35.0 37.0 35.0 37.0 6 35.65041952728409 37.0 35.0 37.0 33.0 37.0 7 35.99372864641152 37.0 35.0 37.0 35.0 37.0 8 35.761303255984394 37.0 35.0 37.0 35.0 37.0 9 37.5188814222433 39.0 37.0 39.0 35.0 39.0 10 37.33657431857129 39.0 37.0 39.0 34.0 39.0 11 37.221981666900184 39.0 37.0 39.0 34.0 39.0 12 36.820073450955455 39.0 35.0 39.0 33.0 39.0 13 36.489098218423635 39.0 35.0 39.0 33.0 39.0 14 37.13788625071403 39.0 35.0 41.0 32.0 41.0 15 37.29848544453186 39.0 35.0 41.0 32.0 41.0 16 37.5339218930192 39.0 35.0 41.0 33.0 41.0 17 37.62312600368602 39.0 35.0 41.0 33.0 41.0 18 37.66519728829635 39.0 35.0 41.0 33.0 41.0 19 37.63477280320748 39.0 35.0 41.0 33.0 41.0 20 37.520970975286424 39.0 35.0 41.0 33.0 41.0 21 37.478899690676094 39.0 35.0 41.0 33.0 41.0 22 37.45322823146481 39.0 35.0 41.0 33.0 41.0 23 37.23940942845133 39.0 35.0 41.0 33.0 41.0 24 36.997681417932164 39.0 35.0 41.0 32.0 41.0 25 36.97800917193882 39.0 35.0 40.0 32.0 41.0 26 37.121305896554325 39.0 35.0 40.0 33.0 41.0 27 37.16187906189712 39.0 35.0 41.0 33.0 41.0 28 37.17854294428936 39.0 35.0 41.0 33.0 41.0 29 37.17827484560749 39.0 35.0 41.0 33.0 41.0 30 37.029577077697425 39.0 35.0 40.0 32.0 41.0 31 36.8897386913551 39.0 35.0 40.0 32.0 41.0 32 36.795160481984844 38.0 35.0 40.0 32.0 41.0 33 36.68179380921074 38.0 35.0 40.0 32.0 41.0 34 36.55915550262441 38.0 35.0 40.0 31.0 41.0 35 36.475819923908475 38.0 35.0 40.0 31.0 41.0 36 36.35037803261373 38.0 35.0 40.0 31.0 41.0 37 36.27659565868748 38.0 35.0 40.0 31.0 41.0 38 36.230995979867004 38.0 35.0 40.0 31.0 41.0 39 36.18077934535421 38.0 35.0 40.0 31.0 41.0 40 36.10456118038865 38.0 35.0 40.0 31.0 41.0 41 36.007576819029346 38.0 35.0 40.0 30.0 41.0 42 36.00759433301359 38.0 35.0 40.0 30.0 41.0 43 35.92537426037097 38.0 35.0 40.0 30.0 41.0 44 35.81932573855124 38.0 35.0 40.0 30.0 41.0 45 35.83972683573499 38.0 35.0 40.0 30.0 41.0 46 35.747416013709405 37.0 35.0 40.0 30.0 41.0 47 35.62091789444187 37.0 35.0 40.0 30.0 41.0 48 35.598393563476066 37.0 35.0 40.0 30.0 41.0 49 35.571516333811154 37.0 35.0 40.0 30.0 41.0 50 35.47605703631053 37.0 34.0 40.0 29.0 41.0 51 34.36042432342131 36.0 33.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 10.0 10 5.0 11 7.0 12 11.0 13 12.0 14 8.0 15 34.0 16 65.0 17 138.0 18 267.0 19 413.0 20 720.0 21 1213.0 22 1875.0 23 2807.0 24 3967.0 25 4612.0 26 5389.0 27 6355.0 28 7698.0 29 9637.0 30 12198.0 31 16306.0 32 22485.0 33 34366.0 34 70278.0 35 80911.0 36 56412.0 37 88286.0 38 151953.0 39 163741.0 40 85.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.092608559757714 21.861089854822545 26.52196523069959 11.524336354720154 2 30.04672192104157 26.83640860933576 24.995554142461444 18.121315327161224 3 29.56225817229449 26.507819320349636 27.32895573542567 16.600966771930203 4 26.568175204509448 26.232715044781912 27.867982281236863 19.331127469471777 5 25.692745438280717 28.641830938857332 25.2953127189248 20.370110903937146 6 24.13278833406982 32.67476261815203 25.395007706153066 17.79744134162508 7 75.32751150534041 6.25262709763642 11.865589601543386 6.554271795479775 8 74.62641324380543 5.240588254313829 11.548047594925794 8.584950906954939 9 69.4595184462671 6.215308838903678 13.961474623584062 10.363698091245164 10 44.784739661360376 19.601651164545228 19.9821087914812 15.631500382613195 11 36.086486748650074 20.478023991463953 23.198349913238417 20.237139346647552 12 32.0061325889441 17.752039705549507 30.37167369022342 19.870154015282974 13 26.214662168716252 24.2967461711736 32.60174277615511 16.886848883955036 14 18.37567226754901 28.44742571376222 32.28945496481037 20.887447053878404 15 15.052865287822122 23.14944548031428 42.807680286259334 18.99000894560426 16 19.440657232467153 23.542028173264498 33.6496179256976 23.36769666857075 17 20.479775389888232 22.67037064979576 27.62440317730619 29.22545078300982 18 22.81587144196674 23.41013439962062 31.97662826164276 21.797365896769882 19 23.455131866829053 24.847089445264757 27.747539958828664 23.950238729077526 20 22.53497407930332 29.26923574361683 28.011731674983565 20.18405850209629 21 19.785278553183232 29.078468038325987 31.418066887253055 19.718186521237726 22 17.16033648405419 25.02317234838279 30.305255273056485 27.511235894506537 23 17.1478072491728 27.003869243288104 29.93395880710906 25.91436470043004 24 21.696862571807333 24.945841371803024 28.75863574146126 24.59866031492838 25 18.678933640860933 27.05519868941509 26.668004914693423 27.597862755030555 26 16.46166323572206 28.443518748046515 27.630465710313313 27.464352305918112 27 18.934098918983004 29.137341969972947 27.899238006962484 24.029321104081568 28 14.584703016716425 26.530183330998135 31.045692637659915 27.839421014625525 29 21.01880193569943 27.797387452442795 27.182511882564693 24.001298729293083 30 25.439466281538643 27.847234946056933 25.73801235140058 20.975286421003847 31 24.2044609465096 27.29581388832006 25.164631451882347 23.335093713287993 32 30.00388002112456 27.752255262278652 20.463069743379712 21.780794973217077 33 28.204250778698686 27.048866710496533 22.307831175969735 22.439051334835046 34 21.46096267635235 24.274786329392235 28.364571095998187 25.899679898257222 35 24.037808650291538 28.566116637746138 22.84348964788808 24.552585064074236 36 26.48370391127685 30.701340762855267 23.418891391742022 19.396063934125863 37 23.092457670047313 28.349212679046808 28.151304657103132 20.407024993802743 38 27.075272409816453 27.035798583792293 23.80285181552655 22.086077190864707 39 27.60756280784195 23.182722050375606 24.5599948266385 24.649720315143938 40 28.17286033001735 20.18540573165343 26.180981429787785 25.460752508541436 41 21.49895454986366 25.30770723085048 22.56151450157895 30.631823717706908 42 22.680609594430017 25.2350915577207 27.95245357446946 24.13184527337982 43 23.755159889203842 23.78223920330233 28.704477113264282 23.758123794229547 44 22.824493711132426 21.811377084164125 28.022509511440674 27.341619693262775 45 23.444084584460516 20.553064677796577 24.85934923423472 31.143501503508187 46 26.443152301606975 22.240200252201372 26.721624651067543 24.59502279512411 47 19.412095965855812 22.625238459631614 32.60268583684511 25.35997973766746 48 21.982744683832166 22.096450858454673 29.616416800491468 26.30438765722169 49 24.814082321114856 18.559973270965585 33.53052283284653 23.09542157507302 50 22.157749803304487 19.48363385533988 29.6021361671858 28.756480174169834 51 20.078166258905185 20.655049955271977 25.093497731265423 34.17328605455741 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1352.0 1 1340.0 2 1328.0 3 1599.0 4 1870.0 5 1442.0 6 1014.0 7 1074.5 8 1135.0 9 1295.5 10 1456.0 11 1525.0 12 1594.0 13 1705.0 14 1816.0 15 1958.5 16 2101.0 17 2005.5 18 1910.0 19 1973.5 20 2037.0 21 2076.0 22 2115.0 23 2132.0 24 2149.0 25 2054.0 26 2064.5 27 2170.0 28 3035.0 29 3900.0 30 3963.5 31 4027.0 32 5583.0 33 7139.0 34 7737.0 35 8335.0 36 9480.0 37 10625.0 38 11952.0 39 13279.0 40 17286.0 41 21293.0 42 28589.0 43 35885.0 44 44192.0 45 52499.0 46 70434.0 47 88369.0 48 100003.5 49 111638.0 50 109088.0 51 106538.0 52 87074.5 53 67611.0 54 57357.0 55 47103.0 56 40821.5 57 34540.0 58 30841.0 59 27142.0 60 23949.0 61 20756.0 62 18952.0 63 17148.0 64 14865.0 65 12582.0 66 11163.5 67 9745.0 68 7921.0 69 6097.0 70 4719.0 71 3341.0 72 2955.0 73 2569.0 74 2031.0 75 1399.5 76 1306.0 77 938.5 78 571.0 79 467.5 80 364.0 81 296.5 82 229.0 83 159.5 84 90.0 85 60.5 86 31.0 87 19.5 88 8.0 89 5.5 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 742264.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.551522172420384 #Duplication Level Percentage of deduplicated Percentage of total 1 64.12297002899957 15.101935503994312 2 12.736202327822333 5.999139030322795 3 6.3010720873546076 4.451995169260537 4 3.7090318737278407 3.4941338564926068 5 2.379618956988695 2.802182431371556 6 1.690459203516062 2.3887732447908383 7 1.2378105557946488 2.040662592503757 8 0.9194781056030307 1.7324087192931894 9 0.6817255682253458 1.4450107352008605 >10 4.756304409360144 22.984342379524126 >50 1.0976966249389297 18.466950896549616 >100 0.34916217565091423 12.249320017054014 >500 0.009811168572009159 1.5005824787869098 >1k 0.00750265831977171 3.61132027888491 >5k 0.0011542551261187247 1.7312426659700064 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 6611 0.8906534602243946 No Hit GCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 6126 0.8253128267031676 No Hit CTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGCT 4603 0.6201297651509436 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 2901 0.3908312945259369 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGC 2849 0.3838257008288156 No Hit GAATCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTC 2807 0.37816733668883307 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCG 2661 0.35849778515460806 No Hit ACTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 2086 0.28103208561913284 No Hit CGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTG 1728 0.23280126747356736 No Hit ACCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTG 1282 0.17271482922518133 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCC 1277 0.17204121444661197 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1115 0.15021609562096505 No Hit GCCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTG 1104 0.14873414310811248 No Hit CGTTCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTC 1099 0.1480605283295431 No Hit AAAACTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTC 1057 0.1424021641895606 No Hit GGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTG 907 0.12219372083248009 No Hit AGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTG 893 0.1203075994524859 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 770 0.10373667589967991 No Hit GGCCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCT 755 0.10171583156397186 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 752 0.10131166269683024 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6567744091051162 0.0 2 0.0 0.0 0.0 3.1828298287401786 0.0 3 0.0 0.0 0.0 4.377014108187923 0.0 4 0.0 0.0 0.0 5.7902579136264185 0.0 5 0.0 0.0 0.0 9.657480357393057 0.0 6 0.0 0.0 0.0 11.530398887727278 0.0 7 0.0 0.0 0.0 13.642989556276474 0.0 8 0.0 0.0 0.0 16.545595637131804 0.0 9 0.0 0.0 0.0 17.62324455988705 0.0 10 0.0 0.0 0.0 20.28604377957169 0.0 11 0.0 0.0 0.0 23.88557171033487 0.0 12 0.0 0.0 0.0 26.897438108274144 0.0 13 0.0 0.0 0.0 27.93359236066952 0.0 14 0.0 0.0 0.0 28.360933576193915 0.0 15 0.0 0.0 0.0 29.099754265328777 0.0 16 0.0 0.0 0.0 30.539942661910047 0.0 17 0.0 0.0 0.0 32.184371059353545 0.0 18 0.0 0.0 0.0 34.19591951111734 0.0 19 1.3472295571387E-4 0.0 0.0 35.35372859252234 0.0 20 1.3472295571387E-4 0.0 0.0 36.43232057596758 0.0 21 1.3472295571387E-4 0.0 0.0 37.60238944634254 0.0 22 1.3472295571387E-4 0.0 0.0 38.75709989976612 0.0 23 0.00242501320284966 0.0 0.0 39.86546565642413 0.0 24 0.00242501320284966 0.0 0.0 40.698322968647275 0.0 25 0.00242501320284966 0.0 0.0 41.42838666566074 0.0 26 0.00242501320284966 0.0 0.0 42.13446967655713 0.0 27 0.00242501320284966 0.0 0.0 42.9724464610974 0.0 28 0.00242501320284966 0.0 0.0 43.71988941939795 0.0 29 0.00242501320284966 0.0 0.0 44.454533696905685 0.0 30 0.00242501320284966 0.0 0.0 45.3298287401787 0.0 31 0.00255973615856353 0.0 0.0 45.99172262160094 0.0 32 0.00255973615856353 0.0 0.0 46.611178771973314 0.0 33 0.00255973615856353 0.0 0.0 47.242086373581365 0.0 34 0.00255973615856353 0.0 0.0 47.93806516279922 0.0 35 0.00255973615856353 0.0 0.0 48.648863477145596 0.0 36 0.00255973615856353 0.0 0.0 49.237063901792354 0.0 37 0.00255973615856353 0.0 0.0 49.87403403640753 0.0 38 0.00255973615856353 0.0 0.0 50.59601435607816 0.0 39 0.00255973615856353 0.0 0.0 51.786965284588774 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCATAT 55 1.8189894E-12 45.000004 33 CTACTTA 30 2.1644573E-6 45.000004 26 CGTGCAC 30 2.1644573E-6 45.000004 35 CACATAG 30 2.1644573E-6 45.000004 10 TTCGTCC 35 1.2111559E-7 45.000004 26 TGTATAC 35 1.2111559E-7 45.000004 23 GTCTAGA 30 2.1644573E-6 45.000004 35 CACGAAA 30 2.1644573E-6 45.000004 40 CATTCGT 30 2.1644573E-6 45.000004 10 TATGCGA 35 1.2111559E-7 45.000004 1 ACGGGTA 55 1.8189894E-12 45.000004 5 TAGTTAG 30 2.1644573E-6 45.000004 1 ATATACG 30 2.1644573E-6 45.000004 10 AACGCTC 30 2.1644573E-6 45.000004 17 CTCGCGG 30 2.1644573E-6 45.000004 2 GGGCCTA 30 2.1644573E-6 45.000004 7 TCGTAAG 35 1.2111559E-7 45.000004 1 CTATTAG 30 2.1644573E-6 45.000004 1 GACATAC 30 2.1644573E-6 45.000004 12 TATAGAG 30 2.1644573E-6 45.000004 1 >>END_MODULE