##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935018.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1155328 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27682441696211 33.0 31.0 34.0 30.0 34.0 2 32.45035349268779 34.0 31.0 34.0 31.0 34.0 3 32.46435730805451 34.0 31.0 34.0 30.0 34.0 4 35.97328983630623 37.0 35.0 37.0 35.0 37.0 5 35.89162471609794 37.0 35.0 37.0 35.0 37.0 6 35.82819337884999 37.0 35.0 37.0 35.0 37.0 7 36.08485728728119 37.0 35.0 37.0 35.0 37.0 8 35.82571442914912 37.0 35.0 37.0 35.0 37.0 9 37.55379684384002 39.0 38.0 39.0 35.0 39.0 10 37.38320286533348 39.0 37.0 39.0 34.0 39.0 11 37.282365700476404 39.0 37.0 39.0 34.0 39.0 12 37.06656724324175 39.0 37.0 39.0 34.0 39.0 13 36.94908285785508 39.0 35.0 39.0 33.0 39.0 14 38.05966271050299 40.0 37.0 41.0 33.0 41.0 15 38.14971246260802 40.0 37.0 41.0 33.0 41.0 16 38.20562558857744 40.0 37.0 41.0 34.0 41.0 17 38.22831351789275 40.0 37.0 41.0 34.0 41.0 18 38.21568074174607 40.0 37.0 41.0 34.0 41.0 19 38.18357903556392 40.0 36.0 41.0 34.0 41.0 20 38.156714803068915 40.0 36.0 41.0 34.0 41.0 21 38.0758511868491 40.0 36.0 41.0 34.0 41.0 22 38.02349635774429 40.0 36.0 41.0 34.0 41.0 23 37.81618380234877 40.0 35.0 41.0 33.0 41.0 24 37.591378379126965 39.0 35.0 41.0 33.0 41.0 25 37.54668025011079 39.0 35.0 41.0 33.0 41.0 26 37.723497569521385 39.0 35.0 41.0 33.0 41.0 27 37.77189075310215 40.0 36.0 41.0 34.0 41.0 28 37.77642106830268 40.0 36.0 41.0 34.0 41.0 29 37.81725276285176 40.0 36.0 41.0 34.0 41.0 30 37.745589131398184 40.0 36.0 41.0 34.0 41.0 31 37.659147878351426 40.0 35.0 41.0 33.0 41.0 32 37.5491323676047 40.0 35.0 41.0 33.0 41.0 33 37.47294447983603 40.0 35.0 41.0 33.0 41.0 34 37.36922847883891 40.0 35.0 41.0 33.0 41.0 35 37.28425520717926 40.0 35.0 41.0 33.0 41.0 36 37.22717704409484 39.0 35.0 41.0 33.0 41.0 37 37.17053165854199 39.0 35.0 41.0 33.0 41.0 38 37.07309872174828 39.0 35.0 41.0 32.0 41.0 39 37.0282387339353 39.0 35.0 41.0 32.0 41.0 40 36.97988276922225 39.0 35.0 41.0 32.0 41.0 41 36.91318482716596 39.0 35.0 41.0 32.0 41.0 42 36.87805714048305 39.0 35.0 41.0 32.0 41.0 43 36.803051600930644 39.0 35.0 41.0 32.0 41.0 44 36.685885739807226 39.0 35.0 41.0 31.0 41.0 45 36.67123881702858 39.0 35.0 41.0 31.0 41.0 46 36.54739866081321 39.0 35.0 41.0 31.0 41.0 47 36.4747491621427 39.0 35.0 41.0 31.0 41.0 48 36.41062278417904 38.0 35.0 40.0 31.0 41.0 49 36.33618331763793 38.0 35.0 40.0 31.0 41.0 50 36.26126693025704 38.0 35.0 40.0 31.0 41.0 51 35.22373386605362 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 11.0 9 20.0 10 27.0 11 16.0 12 16.0 13 22.0 14 31.0 15 60.0 16 84.0 17 121.0 18 316.0 19 524.0 20 843.0 21 1444.0 22 2191.0 23 3169.0 24 4677.0 25 5776.0 26 6987.0 27 8397.0 28 10046.0 29 12165.0 30 15055.0 31 19308.0 32 26318.0 33 37752.0 34 77518.0 35 110859.0 36 80080.0 37 125972.0 38 237340.0 39 367867.0 40 316.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.15835502991359 21.71392020274762 25.008828661644138 12.11889610569466 2 30.720972745402168 25.253953855528472 26.186070103035675 17.83900329603368 3 32.14455115776646 24.079741856857968 27.035352730999335 16.740354254376246 4 29.23819036671837 25.766968341458007 26.23047307777532 18.764368214048304 5 25.144634251052516 29.35296296809218 24.78932389762907 20.713078883226235 6 26.303439369598934 33.54458647241303 24.8198779913583 15.332096166629736 7 78.89084311987591 7.007533791269665 8.695625830932862 5.40599725792156 8 79.27973700974961 5.282742216928872 8.355722357633503 7.081798415688012 9 74.0259908874363 7.551708259472635 10.9512623255041 7.471038527586971 10 42.845841181032576 24.805163555284736 17.69021438067804 14.658780883004654 11 33.65615652005318 24.146043374695324 23.31519706957678 18.882603035674716 12 29.519236095723468 21.78454949590073 28.759711527808552 19.93650288056725 13 23.69154041103479 26.601536533348106 29.87731622534899 19.829606830268116 14 19.89348479392865 28.79641106248615 29.030543707068468 22.27956043651673 15 18.720311461333925 26.001014430534013 35.6065117438511 19.672162364280965 16 20.820234600044316 25.669506841347218 31.733325947263463 21.776932611345003 17 21.176323953024596 24.991431004874805 27.700964574562377 26.13128046753822 18 21.926500526257477 26.27028861068026 29.781585835364506 22.021625027697763 19 23.609226124529137 27.850099711943276 26.16815311322845 22.372521050299135 20 25.355310353423445 28.948921864613343 25.54980057611345 20.145967205849768 21 23.312946626412586 28.52722343784622 27.46025371150011 20.69957622424108 22 21.522026645247063 26.619193856636386 26.230386522269 25.628392975847554 23 21.53777974739641 27.21547473964104 27.492106137824063 23.75463937513849 24 23.058300326833592 24.825763765787727 28.840467815200533 23.27546809217815 25 20.894845446487924 27.49954991136716 26.534282904941282 25.071321737203633 26 19.371295424329716 28.614384832705518 27.367639319742963 24.646680423221802 27 21.066138793485486 27.289393142034125 26.743314452692225 24.901153611788168 28 17.80464076002659 27.052317610237093 28.459017698869932 26.684023930866385 29 19.46494848216264 24.588947900509638 28.830600487480613 27.115503129847106 30 21.595079492577 24.399824119211168 27.262560935076447 26.742535453135385 31 22.80625069244405 26.14244612785287 24.248438538666075 26.802864641037004 32 22.484264208951917 26.127125803235096 26.41440352869488 24.974206459118104 33 22.706019416131177 25.859755844227788 26.84718106027033 24.58704367937071 34 21.2601096831376 24.294659179038334 29.2767941225349 25.168437015289165 35 19.605601179924662 23.612601789275427 29.887616330600487 26.89418070019942 36 20.963743629514735 27.04885538998449 27.423900398847774 24.563500581653003 37 21.965796726124527 26.284743380234875 28.757201418125415 22.99225847551518 38 20.075943801240857 27.06737826833592 28.153130539552407 24.703547390870817 39 22.944739502548195 24.773917017504985 29.707840543984048 22.573502935962775 40 23.327314840460893 23.091364530245954 29.9198149789497 23.661505650343454 41 19.78797363173056 24.816675437624642 27.48111358852205 27.914237342122757 42 20.500152337691112 24.334647822955905 27.779643529802794 27.38555630955019 43 21.3444147462885 24.896479614447152 27.228371510081985 26.53073412918236 44 20.2384950421006 24.27570352315533 27.544731885663637 27.94106954908043 45 21.240461583204077 23.045922889430535 27.339855002215817 28.373760525149567 46 22.764011605362285 24.263585752271215 28.253967704409483 24.718434937957014 47 20.002717842898292 23.832798997341015 30.362719504764012 25.80176365499668 48 19.75508253933082 22.203478146465766 31.145181281852423 26.896258032350985 49 21.158320407711056 21.634116025925103 32.135635940616 25.071927625747843 50 19.595474185685795 22.080655883004656 31.039583564148014 27.28428636716153 51 19.039874390649235 22.319116302902724 28.354198980722355 30.286810325725682 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 842.0 1 1134.5 2 1427.0 3 1953.5 4 2480.0 5 1945.5 6 1411.0 7 1493.5 8 1576.0 9 1701.0 10 1826.0 11 2112.0 12 2398.0 13 2271.0 14 2144.0 15 2200.0 16 2256.0 17 2318.0 18 2380.0 19 2488.5 20 2597.0 21 2551.0 22 2505.0 23 2998.5 24 3492.0 25 4941.0 26 7645.0 27 8900.0 28 10755.0 29 12610.0 30 13634.0 31 14658.0 32 17245.0 33 19832.0 34 22097.5 35 24363.0 36 27052.0 37 29741.0 38 32059.0 39 34377.0 40 40754.5 41 47132.0 42 56593.0 43 66054.0 44 74614.0 45 83174.0 46 94948.0 47 106722.0 48 119882.5 49 133043.0 50 131276.5 51 129510.0 52 108827.5 53 88145.0 54 77856.0 55 67567.0 56 59504.5 57 51442.0 58 48822.5 59 46203.0 60 46491.0 61 46779.0 62 42622.5 63 38466.0 64 32431.5 65 26397.0 66 22080.0 67 17763.0 68 14236.0 69 10709.0 70 8358.5 71 6008.0 72 5555.0 73 5102.0 74 4294.0 75 2543.0 76 1600.0 77 1302.0 78 1004.0 79 699.0 80 394.0 81 346.5 82 299.0 83 194.0 84 89.0 85 54.0 86 19.0 87 12.0 88 5.0 89 4.5 90 4.0 91 5.0 92 6.0 93 3.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1155328.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.445297328512705 #Duplication Level Percentage of deduplicated Percentage of total 1 66.88595053542358 14.343890963323524 2 12.69521916563563 5.445054993153781 3 5.701028084909942 3.667807270772852 4 3.2996143625351935 2.830448442959926 5 1.957493329153612 2.09895132311397 6 1.2823388660837458 1.6500082955444262 7 0.9103196068188272 1.3665452242543172 8 0.6638257379884555 1.138875226038544 9 0.531264762733984 1.025381771729284 >10 3.8102975439573292 17.90506097797017 >50 1.465555623739747 22.993549761060407 >100 0.7856586788332456 22.400517989672526 >500 0.007350237120061543 1.0350906677844591 >1k 0.003266772053360686 1.139212732420307 >5k 8.166930133401715E-4 0.9596043602015315 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGC 5722 0.49527060713494353 TruSeq Adapter, Index 14 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGC 5236 0.4532046310658099 TruSeq Adapter, Index 14 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGCT 3538 0.3062333813427875 Illumina Paired End PCR Primer 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGC 2141 0.18531533902060715 TruSeq Adapter, Index 14 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTGC 1794 0.155280578329271 No Hit GCCTGTCTCTTATACACATCTGACGCCCCTTGTATCGTATGCCGTCTTCTG 1190 0.1030010525149568 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.4622202526035894E-4 0.0 0.0 0.3257083702636827 0.0 2 3.4622202526035894E-4 0.0 0.0 1.694583702636827 0.0 3 3.4622202526035894E-4 0.0 0.0 2.388152974739641 0.0 4 3.4622202526035894E-4 0.0 0.0 3.239859156880124 0.0 5 3.4622202526035894E-4 0.0 0.0 5.440532904941281 0.0 6 3.4622202526035894E-4 0.0 0.0 6.6117154608907605 0.0 7 3.4622202526035894E-4 0.0 0.0 7.833532988034567 0.0 8 3.4622202526035894E-4 0.0 0.0 9.632242964768446 0.0 9 3.4622202526035894E-4 0.0 0.0 10.220301074673166 0.0 10 3.4622202526035894E-4 0.0 0.0 11.578010746731664 0.0 11 3.4622202526035894E-4 0.0 0.0 13.624961915577222 0.0 12 3.4622202526035894E-4 0.0 0.0 15.198800686904498 0.0 13 3.4622202526035894E-4 0.0 0.0 15.822692776423665 0.0 14 3.4622202526035894E-4 0.0 0.0 16.065221305118545 0.0 15 5.193330378905384E-4 0.0 0.0 16.523619266563262 0.0 16 5.193330378905384E-4 0.0 0.0 17.45582206957678 0.0 17 5.193330378905384E-4 0.0 0.0 18.53127423554177 0.0 18 9.521105694659871E-4 0.0 0.0 19.867345031021493 0.0 19 9.521105694659871E-4 0.0 0.0 20.574157295590517 0.0 20 9.521105694659871E-4 0.0 0.0 21.250675132949258 0.0 21 9.521105694659871E-4 0.0 0.0 22.104891424772877 0.0 22 9.521105694659871E-4 0.0 0.0 22.928640178373588 0.0 23 9.521105694659871E-4 0.0 0.0 23.76554536893419 0.0 24 9.521105694659871E-4 0.0 0.0 24.47893585198316 0.0 25 9.521105694659871E-4 0.0 0.0 25.064224185685795 0.0 26 9.521105694659871E-4 0.0 0.0 25.609610430977177 0.0 27 9.521105694659871E-4 0.0 0.0 26.095446487923777 0.0 28 9.521105694659871E-4 0.0 0.0 26.617289635497453 0.0 29 9.521105694659871E-4 0.0 0.0 27.160165771105696 0.0 30 0.0010386660757810769 0.0 0.0 27.772026645247063 0.0 31 0.0010386660757810769 0.0 0.0 28.341388765787723 0.0 32 0.0011252215820961667 0.0 0.0 28.875522795258142 0.0 33 0.0011252215820961667 0.0 0.0 29.37780439840461 0.0 34 0.0011252215820961667 0.0 0.0 29.906918208508753 0.0 35 0.0011252215820961667 0.0 0.0 30.44970778861068 0.0 36 0.0011252215820961667 0.0 0.0 31.00271091845779 0.0 37 0.0011252215820961667 0.0 0.0 31.51953384666519 0.0 38 0.0011252215820961667 0.0 0.0 32.04700310214935 0.0 39 0.0011252215820961667 0.0 0.0 32.573433691557725 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATCGTC 45 3.8562575E-10 45.000004 25 CATAGTA 45 3.8562575E-10 45.000004 3 CACAACG 90 0.0 45.000004 12 TGCGTTG 90 0.0 45.000004 1 ACAACGT 20 7.033303E-4 45.0 42 AACGTTG 25 3.890819E-5 45.0 1 AACGTTA 20 7.033303E-4 45.0 42 AACGTAC 35 1.211938E-7 45.0 12 TCGTTAG 80 0.0 45.0 1 GTCGAAT 20 7.033303E-4 45.0 31 CACGGTA 25 3.890819E-5 45.0 33 CGTGCTT 20 7.033303E-4 45.0 5 TCCGATT 20 7.033303E-4 45.0 19 GACGTAT 20 7.033303E-4 45.0 14 GACGTAA 20 7.033303E-4 45.0 37 CGCATAT 25 3.890819E-5 45.0 22 TGGCGAT 20 7.033303E-4 45.0 14 ATTCGTT 25 3.890819E-5 45.0 12 ATATGCG 35 1.211938E-7 45.0 1 CACGAAG 25 3.890819E-5 45.0 1 >>END_MODULE