##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935016.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2006381 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39802460250571 33.0 31.0 34.0 31.0 34.0 2 32.56376231632975 34.0 31.0 34.0 31.0 34.0 3 32.568806223743145 34.0 31.0 34.0 31.0 34.0 4 36.067259408856046 37.0 35.0 37.0 35.0 37.0 5 35.99837966966394 37.0 35.0 37.0 35.0 37.0 6 35.933457802879914 37.0 35.0 37.0 35.0 37.0 7 36.17709398165154 37.0 36.0 37.0 35.0 37.0 8 35.95006332296807 37.0 36.0 37.0 35.0 37.0 9 37.68996117885885 39.0 38.0 39.0 35.0 39.0 10 37.49900841365623 39.0 37.0 39.0 35.0 39.0 11 37.41101714978362 39.0 37.0 39.0 35.0 39.0 12 37.1740526849088 39.0 37.0 39.0 34.0 39.0 13 37.053585036939644 39.0 37.0 39.0 33.0 39.0 14 38.09803870750371 40.0 37.0 41.0 33.0 41.0 15 38.2174447425489 40.0 37.0 41.0 33.0 41.0 16 38.30050523803804 40.0 37.0 41.0 34.0 41.0 17 38.3294508869452 40.0 37.0 41.0 34.0 41.0 18 38.34111417522395 40.0 37.0 41.0 34.0 41.0 19 38.3156469284747 40.0 37.0 41.0 34.0 41.0 20 38.26476775846661 40.0 37.0 41.0 34.0 41.0 21 38.19492608831523 40.0 36.0 41.0 34.0 41.0 22 38.16111695635076 40.0 36.0 41.0 34.0 41.0 23 37.97415745065369 40.0 36.0 41.0 34.0 41.0 24 37.76711551794001 40.0 35.0 41.0 33.0 41.0 25 37.72065973511511 40.0 35.0 41.0 33.0 41.0 26 37.85772143974649 40.0 36.0 41.0 34.0 41.0 27 37.88737732265208 40.0 36.0 41.0 34.0 41.0 28 37.84718356084911 40.0 36.0 41.0 34.0 41.0 29 37.85606472549331 40.0 36.0 41.0 34.0 41.0 30 37.749750919690726 40.0 36.0 41.0 33.0 41.0 31 37.65929701288041 40.0 35.0 41.0 33.0 41.0 32 37.56842045453979 40.0 35.0 41.0 33.0 41.0 33 37.49657218643917 40.0 35.0 41.0 33.0 41.0 34 37.36380129197794 40.0 35.0 41.0 33.0 41.0 35 37.27665981685433 40.0 35.0 41.0 33.0 41.0 36 37.208242103568566 39.0 35.0 41.0 33.0 41.0 37 37.157338511479125 39.0 35.0 41.0 32.0 41.0 38 37.07503659574129 39.0 35.0 41.0 32.0 41.0 39 36.98419143721955 39.0 35.0 41.0 32.0 41.0 40 36.893114518129906 39.0 35.0 41.0 32.0 41.0 41 36.82343832003991 39.0 35.0 41.0 32.0 41.0 42 36.816571229492304 39.0 35.0 41.0 32.0 41.0 43 36.73671451234835 39.0 35.0 41.0 32.0 41.0 44 36.59845014481297 39.0 35.0 41.0 31.0 41.0 45 36.536911483910586 39.0 35.0 41.0 31.0 41.0 46 36.41989033987064 38.0 35.0 41.0 31.0 41.0 47 36.364358015750746 38.0 35.0 40.0 31.0 41.0 48 36.304629579327155 38.0 35.0 40.0 31.0 41.0 49 36.23194298590347 38.0 35.0 40.0 31.0 41.0 50 36.137853179431026 38.0 35.0 40.0 31.0 41.0 51 35.05725383165012 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 8.0 9 34.0 10 36.0 11 39.0 12 45.0 13 40.0 14 46.0 15 98.0 16 164.0 17 270.0 18 515.0 19 942.0 20 1521.0 21 2426.0 22 3671.0 23 5277.0 24 7246.0 25 9183.0 26 11354.0 27 13940.0 28 16652.0 29 20427.0 30 25794.0 31 33445.0 32 45384.0 33 68343.0 34 137486.0 35 176408.0 36 145030.0 37 228928.0 38 409065.0 39 642032.0 40 530.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.17533957907297 21.379090013312528 25.602664698280137 10.842905709334369 2 30.952595743281066 24.610231057810054 25.695867335266833 18.74130586364205 3 32.225584273375794 24.57748553240885 25.638151477710363 17.558778716504992 4 27.886228986418832 26.491080208594482 25.98050918544384 19.642181619542846 5 26.14647965665544 29.94326600979575 23.858778566982046 20.051475766566767 6 27.00459184970352 33.889027059167724 23.37347692188074 15.732904169248012 7 82.27151273860748 5.853723694552531 7.334050711205897 4.5407128556341 8 83.30885310417115 4.273714713207511 7.064261473767944 5.353170708853403 9 77.64482418842682 6.674654514770624 9.197455518169281 6.483065778633271 10 44.025387002767665 24.168839318155424 16.183616172601315 15.62215750647559 11 33.543130641687696 23.74803190420962 22.76287504716203 19.945962406940655 12 29.35080625265092 22.23142065240849 27.959295866537808 20.45847722840278 13 25.70817805790625 24.546384759425056 29.89820976175512 19.847227420913573 14 21.424345625282537 26.536236138599794 30.699453393946612 21.339964842171053 15 20.67030140337254 23.315362336465505 34.33914097073288 21.675195289429077 16 24.849766818964095 23.790745626079993 29.558543467068322 21.800944087887594 17 24.607739008692768 23.349154522495976 27.479277365565164 24.563829103246093 18 25.469190547558018 23.473707137378195 28.68607707110464 22.371025243959146 19 25.57874102675414 25.473277508110375 25.79355566066465 23.154425804470836 20 26.22981377913766 27.135025700502545 26.106806234708163 20.52835428565163 21 24.711159047060356 26.731812153324817 28.232673654704666 20.324355144910164 22 24.17452119014285 23.397201229477353 27.77174424997047 24.65653333040933 23 22.463629789157693 25.142183862387053 28.168827356319664 24.225358992135593 24 23.261534075532015 24.56961065719821 29.089240777300024 23.079614489969753 25 22.947286681841582 26.859255545183093 25.788422039483027 24.40503573349229 26 21.94623055142568 26.681921329996644 26.732360404130624 24.639487714447057 27 22.222648639515626 25.86228637531954 27.534202128110262 24.380862857054566 28 20.222729381907026 26.714068763609706 27.623018758650524 25.440183095832747 29 22.204307158012362 26.824964949329168 26.460926414275253 24.50980147838322 30 23.86072236529353 25.955738217217966 26.291965484122905 23.8915739333656 31 24.198095974792423 26.878793210262657 24.911270591178845 24.01184022376607 32 25.69756192866659 26.60940270068347 24.742808070849954 22.950227299799987 33 24.489416516603775 25.97074035290406 24.25830388146618 25.28153924902598 34 21.725484840616012 26.57177275901237 27.355223160506405 24.34751923986521 35 21.739789202549268 26.96915491125564 26.987097664900134 24.30395822129496 36 23.25106746923939 28.316007777186886 24.39551610586424 24.037408647709483 37 22.54197981340533 28.365798918550368 25.177770323781974 23.91445094426233 38 23.199332529564426 27.872672239220762 24.693714703239316 24.234280527975493 39 23.5231992328476 25.435149156615815 24.956875090025274 26.084776520511312 40 24.73099575803399 23.87447847642098 26.774824921089262 24.619700844455764 41 20.491621481662754 24.407876669486008 26.726479168213814 28.374022680637427 42 21.826362988883965 24.424473716607164 27.234109573406045 26.51505372110282 43 22.361555457313443 24.17945544739509 27.130390489144386 26.328598606147086 44 23.02792939127713 24.7028356030086 26.126892150593534 26.142342855120738 45 23.133442750903242 23.781275839434286 25.84813153633333 27.23714987332914 46 23.045024848221747 24.605944733328318 26.900723242494823 25.448307175955115 47 20.251986038544025 25.27705356061486 29.107980986662053 25.36297941417906 48 21.090411043565503 24.35793600517549 28.361412912103933 26.19024003915508 49 22.866594131423692 23.445945710211568 28.4781903337402 25.209269824624535 50 21.301387921835385 23.813473114029687 27.89943684674047 26.985702117394457 51 20.739480686868546 24.564626558963624 25.632818492599363 29.063074261568467 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 725.0 1 1330.0 2 1935.0 3 3090.5 4 4246.0 5 3202.0 6 2158.0 7 2362.5 8 2567.0 9 2625.0 10 2683.0 11 2864.0 12 3045.0 13 3257.5 14 3470.0 15 3614.5 16 3759.0 17 3710.5 18 3662.0 19 3757.5 20 3853.0 21 4068.5 22 4284.0 23 5291.5 24 6299.0 25 7600.0 26 10926.5 27 12952.0 28 15576.5 29 18201.0 30 21483.0 31 24765.0 32 28890.5 33 33016.0 34 37247.5 35 41479.0 36 46509.5 37 51540.0 38 57423.5 39 63307.0 40 70647.5 41 77988.0 42 89911.5 43 101835.0 44 112220.0 45 122605.0 46 141205.0 47 159805.0 48 177960.0 49 196115.0 50 196293.0 51 196471.0 52 176506.0 53 156541.0 54 139999.5 55 123458.0 56 118194.5 57 112931.0 58 107281.5 59 101632.0 60 96756.0 61 91880.0 62 83043.5 63 74207.0 64 66724.5 65 59242.0 66 51846.0 67 44450.0 68 37497.0 69 30544.0 70 26346.5 71 22149.0 72 18528.5 73 14908.0 74 12134.0 75 7844.5 76 6329.0 77 4946.5 78 3564.0 79 2637.0 80 1710.0 81 1308.0 82 906.0 83 673.5 84 441.0 85 401.0 86 361.0 87 208.5 88 56.0 89 39.5 90 23.0 91 19.5 92 16.0 93 11.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2006381.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.00440497100388 #Duplication Level Percentage of deduplicated Percentage of total 1 67.86256062519399 13.57550145115683 2 12.364114070328535 4.946734899410783 3 5.440476381049027 3.2650047828505913 4 2.93263224609971 2.346622523280132 5 1.8021264579252034 1.8025233736648276 6 1.1959537066567578 1.4354605364720976 7 0.8517559246761681 1.192720931757176 8 0.6657202570615507 1.065387009572805 9 0.4788242796576806 0.8620735320199312 >10 3.7623709470328057 16.475738459154773 >50 1.622600139158388 24.037184122040685 >100 1.0104789944346957 26.650950579762466 >500 0.0063329089789902395 0.7773457614783555 >1k 0.003799745387394144 1.2572326168368972 >5k 2.5331635915960956E-4 0.30951942054170767 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTCTTCTGC 6108 0.304428720168303 Illumina PCR Primer Index 8 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTCTTCTGC 4582 0.22837138110857308 RNA PCR Primer, Index 40 (96% over 25bp) CTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTCTTCTGCT 3504 0.17464280213977307 RNA PCR Primer, Index 40 (96% over 26bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.968196469165129E-5 0.0 0.0 0.18530877236177976 0.0 2 9.968196469165129E-5 0.0 0.0 0.939053948377701 0.0 3 9.968196469165129E-5 0.0 0.0 1.3600108852705444 0.0 4 9.968196469165129E-5 0.0 0.0 1.8629063971399251 0.0 5 9.968196469165129E-5 0.0 0.0 3.2663287780336834 0.0 6 9.968196469165129E-5 0.0 0.0 4.073952055965442 0.0 7 9.968196469165129E-5 0.0 0.0 4.890596551701796 0.0 8 9.968196469165129E-5 0.0 0.0 6.180780220705838 0.0 9 9.968196469165129E-5 0.0 0.0 6.649734023597712 0.0 10 9.968196469165129E-5 0.0 0.0 7.740404240271414 0.0 11 9.968196469165129E-5 0.0 0.0 9.305510767895031 0.0 12 9.968196469165129E-5 0.0 0.0 10.511114289858208 0.0 13 9.968196469165129E-5 0.0 0.0 10.981962050079222 0.0 14 9.968196469165129E-5 0.0 0.0 11.172055556746201 0.0 15 9.968196469165129E-5 0.0 0.0 11.531409039459604 0.0 16 9.968196469165129E-5 0.0 0.0 12.260084201355575 0.0 17 9.968196469165129E-5 0.0 0.0 13.128264272837512 9.968196469165129E-5 18 9.968196469165129E-5 0.0 0.0 14.082519720830689 9.968196469165129E-5 19 9.968196469165129E-5 0.0 0.0 14.664064302841783 9.968196469165129E-5 20 9.968196469165129E-5 0.0 0.0 15.23922923911261 9.968196469165129E-5 21 1.4952294703747692E-4 0.0 0.0 15.929975413443408 9.968196469165129E-5 22 1.4952294703747692E-4 0.0 0.0 16.64624017073527 9.968196469165129E-5 23 1.4952294703747692E-4 0.0 0.0 17.34590788090597 9.968196469165129E-5 24 1.4952294703747692E-4 0.0 0.0 17.92615659737607 9.968196469165129E-5 25 1.4952294703747692E-4 0.0 0.0 18.436129528738558 9.968196469165129E-5 26 1.4952294703747692E-4 0.0 0.0 18.91789246409331 9.968196469165129E-5 27 1.9936392938330258E-4 0.0 0.0 19.45901600942194 9.968196469165129E-5 28 1.9936392938330258E-4 0.0 0.0 19.926474582843436 9.968196469165129E-5 29 1.9936392938330258E-4 0.0 0.0 20.46490671512539 9.968196469165129E-5 30 2.492049117291282E-4 0.0 0.0 21.042264654619437 9.968196469165129E-5 31 2.492049117291282E-4 0.0 0.0 21.545210007471162 9.968196469165129E-5 32 2.492049117291282E-4 0.0 0.0 22.044018558788185 9.968196469165129E-5 33 2.492049117291282E-4 0.0 0.0 22.528423066207267 9.968196469165129E-5 34 2.492049117291282E-4 0.0 0.0 23.050058787438676 9.968196469165129E-5 35 2.492049117291282E-4 0.0 0.0 23.59641563591362 9.968196469165129E-5 36 2.492049117291282E-4 0.0 0.0 24.07758047948022 9.968196469165129E-5 37 2.492049117291282E-4 0.0 0.0 24.588550230489624 9.968196469165129E-5 38 2.9904589407495384E-4 0.0 0.0 25.177670641817283 9.968196469165129E-5 39 2.9904589407495384E-4 0.0 0.0 25.961818817064156 9.968196469165129E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTACGC 20 7.034545E-4 45.000004 32 CGTCTAA 20 7.034545E-4 45.000004 45 CGTAGAT 20 7.034545E-4 45.000004 18 CGTACCA 20 7.034545E-4 45.000004 33 CCGTTCG 20 7.034545E-4 45.000004 27 GGCGTAT 25 3.8918493E-5 45.0 8 CGTACGA 25 3.8918493E-5 45.0 38 CGCAATA 25 3.8918493E-5 45.0 3 TCGTTAG 80 0.0 42.187504 1 CGGTCTA 80 0.0 42.187504 31 CCGGTAT 65 0.0 41.538464 42 CGGATGG 245 0.0 39.489796 2 TCGATAG 80 0.0 39.375004 1 ATACGTT 40 3.459936E-7 39.375004 12 TTCGATC 40 3.459936E-7 39.375004 38 TACGTAC 40 3.459936E-7 39.375004 12 ATTAGCG 115 0.0 39.130432 1 TGCTACG 105 0.0 38.57143 1 GTATGCG 130 0.0 38.076927 1 AATAGCG 65 9.094947E-12 38.076927 1 >>END_MODULE