##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935014.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2159709 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.29976816321088 33.0 31.0 34.0 30.0 34.0 2 32.47148296367705 34.0 31.0 34.0 31.0 34.0 3 32.48000818628806 34.0 31.0 34.0 30.0 34.0 4 35.99688985877264 37.0 35.0 37.0 35.0 37.0 5 35.91654107104244 37.0 35.0 37.0 35.0 37.0 6 35.85363213284753 37.0 35.0 37.0 35.0 37.0 7 36.11383941077247 37.0 35.0 37.0 35.0 37.0 8 35.83112308185964 37.0 35.0 37.0 35.0 37.0 9 37.605764943332645 39.0 38.0 39.0 35.0 39.0 10 37.419032378899196 39.0 37.0 39.0 35.0 39.0 11 37.344158865847206 39.0 37.0 39.0 34.0 39.0 12 37.16167826313637 39.0 37.0 39.0 34.0 39.0 13 37.043088675372466 39.0 37.0 39.0 33.0 39.0 14 38.07613757223774 40.0 37.0 41.0 33.0 41.0 15 38.168953317321915 40.0 37.0 41.0 33.0 41.0 16 38.29524857284014 40.0 37.0 41.0 34.0 41.0 17 38.29800449968028 40.0 37.0 41.0 34.0 41.0 18 38.31033254943143 40.0 37.0 41.0 34.0 41.0 19 38.27304187740108 40.0 37.0 41.0 34.0 41.0 20 38.18710622588506 40.0 37.0 41.0 34.0 41.0 21 38.14184735073105 40.0 37.0 41.0 34.0 41.0 22 38.121001486774375 40.0 36.0 41.0 34.0 41.0 23 37.89360649976455 40.0 36.0 41.0 33.0 41.0 24 37.68200067694305 40.0 36.0 41.0 33.0 41.0 25 37.65639954271617 40.0 35.0 41.0 33.0 41.0 26 37.80415463379557 40.0 36.0 41.0 33.0 41.0 27 37.808115352577595 40.0 36.0 41.0 33.0 41.0 28 37.78125293731702 40.0 36.0 41.0 33.0 41.0 29 37.81421848962059 40.0 36.0 41.0 34.0 41.0 30 37.68899282264416 40.0 36.0 41.0 33.0 41.0 31 37.635643042650656 40.0 36.0 41.0 33.0 41.0 32 37.53841373999923 40.0 35.0 41.0 33.0 41.0 33 37.45669347120376 40.0 35.0 41.0 33.0 41.0 34 37.30108269215899 40.0 35.0 41.0 33.0 41.0 35 37.197464565828085 40.0 35.0 41.0 32.0 41.0 36 37.112959662621215 39.0 35.0 41.0 32.0 41.0 37 37.029984132121506 39.0 35.0 41.0 32.0 41.0 38 36.98416082907466 39.0 35.0 41.0 32.0 41.0 39 36.92109862949129 39.0 35.0 41.0 32.0 41.0 40 36.84255239942048 39.0 35.0 41.0 31.0 41.0 41 36.73626030173509 39.0 35.0 41.0 31.0 41.0 42 36.72544495577876 39.0 35.0 41.0 31.0 41.0 43 36.6154329124896 39.0 35.0 41.0 31.0 41.0 44 36.50375166283976 39.0 35.0 41.0 31.0 41.0 45 36.473349881859086 39.0 35.0 41.0 31.0 41.0 46 36.36788011718245 38.0 35.0 41.0 31.0 41.0 47 36.266782700817565 38.0 35.0 40.0 31.0 41.0 48 36.19961207736783 38.0 35.0 40.0 31.0 41.0 49 36.14190291377218 38.0 35.0 40.0 31.0 41.0 50 36.02421854055338 38.0 35.0 40.0 31.0 41.0 51 34.98205962006919 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 20.0 9 36.0 10 39.0 11 27.0 12 32.0 13 43.0 14 75.0 15 85.0 16 172.0 17 365.0 18 589.0 19 1048.0 20 1968.0 21 3280.0 22 4864.0 23 6951.0 24 9176.0 25 11510.0 26 13649.0 27 16333.0 28 19382.0 29 23578.0 30 29325.0 31 38176.0 32 51296.0 33 74489.0 34 144399.0 35 174505.0 36 158115.0 37 246985.0 38 440273.0 39 688338.0 40 583.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.75621900913503 20.579392871910056 24.591831584718125 11.072556534236789 2 30.75020755110989 26.612890903357812 24.803758284102166 17.83314326143013 3 31.117525555526232 26.915940990198216 25.092593492919647 16.873939961355905 4 27.34562850828514 25.497138734894374 28.163933196555647 18.99329956026483 5 26.093700586514203 29.210555681344108 24.356892525798614 20.338851206343076 6 26.440923291054492 34.2621621709221 23.934891228401604 15.362023309621806 7 79.9430849248672 5.566953696076647 9.736450605150972 4.753510773905188 8 80.37129076185727 5.751422992634656 7.964684131056544 5.912602114451531 9 75.03149729894166 6.3547450142588655 9.727838333775523 8.885919353023949 10 42.269490936047404 23.386761827635112 17.424291883767673 16.91945535254981 11 32.00162614500379 22.889565214572887 23.808439007292186 21.30036963313113 12 27.329931949165378 21.477013801396392 29.227131988615135 21.9659222608231 13 24.82468702959519 23.942670054160075 32.001996565278006 19.230646350966726 14 20.9310606197409 26.720173875276714 30.51786143410987 21.83090407087251 15 18.40553519015756 23.53914346793943 35.85473783736605 22.20058350453695 16 22.598924206918618 24.83959644563226 29.182542648106757 23.378936699342365 17 23.1941895875787 23.48608076365844 28.277096590327677 25.042633058435186 18 24.34957672538291 22.87359084024746 30.026267427695117 22.75056500667451 19 23.95554215868897 25.541403957662816 26.408187399320926 24.094866484327287 20 24.88626940018308 26.831855587951896 27.372206162959916 20.90966884890511 21 22.964204899826782 27.46694114808986 29.314504870795094 20.254349081288268 22 22.52678485851566 23.10524241923333 28.53870590899052 25.82926681326049 23 21.401864788265456 26.361977470112873 28.47027076332969 23.765886978291984 24 22.414686423031995 24.454637175656536 28.6505728318028 24.48010356950867 25 22.308977737278493 27.202090652027657 26.40953017281495 24.0794014378789 26 21.09381402772318 25.41161795408548 27.878153955000418 25.616414063190923 27 21.97754419692653 25.653594998215034 28.39382527923901 23.975035525619422 28 18.966860813192888 24.970493710032233 29.071370263308623 26.99127521346626 29 23.331106181434627 23.646796860132547 28.060447032447428 24.961649925985398 30 23.06921904756613 23.91502744119694 29.625750506202458 23.390003005034472 31 24.105006739333863 24.477186509849243 25.88144976939023 25.536356981426668 32 24.58919234026436 24.4147243911101 28.035999294349377 22.960083974276163 33 23.91789819832209 22.65981203949236 26.77407002517469 26.648219737010866 34 22.162615426430136 22.611518496241857 30.619819614586962 24.606046462741045 35 22.18275702884046 23.81881077497015 30.558376151601905 23.440056044587486 36 25.64387146601695 24.151401878679028 27.313448246962903 22.891278408341122 37 21.352830404466527 24.6126677251426 30.889346666611107 23.14515520377977 38 21.607448040453598 24.839827958303644 27.85231714087407 25.70040686036869 39 23.319252732659816 22.248877047787456 29.065443538921215 25.36642668063151 40 23.665132663706082 21.053484520368254 31.706540094058965 23.574842721866695 41 22.52391410139051 22.47724114683969 29.295243016536027 25.70360173523377 42 23.68745048522741 21.77043296110726 31.377190167749454 23.16492638591588 43 24.413983550561674 21.426914459309103 29.4932326531028 24.665869337026425 44 22.40213843624303 21.891838205980527 29.06294320207028 26.643080155706162 45 21.582768789684163 21.768812372407577 28.64617409104653 28.00224474686173 46 23.694858890711664 22.570540753407055 28.985201247019855 24.749399108861425 47 20.17947788336299 23.713565114559415 32.75862627789207 23.348330724185526 48 21.898968796259126 23.636425092454587 29.360761102537424 25.103845008748866 49 23.36916686461 20.723625266181696 31.67621193410779 24.230995935100516 50 21.788490949475136 21.917952835312533 30.441693765224855 25.851862449987472 51 21.46122463720807 21.326854682737352 28.116334191319293 29.095586488735286 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 973.0 1 1690.0 2 2407.0 3 3550.5 4 4694.0 5 3685.0 6 2676.0 7 2732.0 8 2788.0 9 2985.5 10 3183.0 11 3568.5 12 3954.0 13 4196.0 14 4438.0 15 4025.0 16 3612.0 17 3613.5 18 3615.0 19 4067.5 20 4520.0 21 4977.5 22 5435.0 23 5938.0 24 6441.0 25 7764.0 26 11458.5 27 13830.0 28 15830.5 29 17831.0 30 22308.5 31 26786.0 32 30784.0 33 34782.0 34 39873.0 35 44964.0 36 51517.0 37 58070.0 38 62084.0 39 66098.0 40 75599.0 41 85100.0 42 95285.0 43 105470.0 44 119640.0 45 133810.0 46 174701.5 47 215593.0 48 222656.0 49 229719.0 50 226611.5 51 223504.0 52 197142.0 53 170780.0 54 153536.5 55 136293.0 56 124269.5 57 112246.0 58 104756.0 59 97266.0 60 89798.0 61 82330.0 62 74360.5 63 66391.0 64 60404.0 65 54417.0 66 46415.0 67 38413.0 68 34746.0 69 31079.0 70 26291.0 71 21503.0 72 17807.0 73 14111.0 74 11754.0 75 7462.5 76 5528.0 77 4498.0 78 3468.0 79 2436.0 80 1404.0 81 1126.0 82 848.0 83 695.0 84 542.0 85 374.5 86 207.0 87 124.5 88 42.0 89 32.5 90 23.0 91 26.5 92 30.0 93 19.0 94 8.0 95 4.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2159709.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.943316397056574 #Duplication Level Percentage of deduplicated Percentage of total 1 66.90548068033856 13.343171699051476 2 12.543028881873482 5.002991871372433 3 5.628981355798947 3.3678166851549265 4 3.145516315073895 2.509281084144887 5 2.000798470873665 1.995127847569024 6 1.3554580542327974 1.6219397303102006 7 0.9504468934049836 1.3268544179642563 8 0.6918743399350182 1.1038615094662994 9 0.5365015750099115 0.9629658592147659 >10 3.856937774175664 15.99938823464063 >50 1.353620076131322 20.20010543998816 >100 1.0146296281202285 27.29593266650111 >500 0.0110721110771739 1.4443155054775385 >1k 0.004475959797155407 1.5876570775031702 >5k 4.7115366285846384E-4 0.6791693756809347 >10k+ 7.067304942876958E-4 1.5594209959602647 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTC 11371 0.526506117259316 TruSeq Adapter, Index 23 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGC 11347 0.5253948564366774 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCG 10474 0.4849727440131981 No Hit GCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTGC 8090 0.3745875022977632 TruSeq Adapter, Index 23 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTGC 6366 0.29476193320489014 TruSeq Adapter, Index 23 (95% over 24bp) CTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTGCT 4408 0.20410157109129057 TruSeq Adapter, Index 20 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTGC 2517 0.11654347877422375 TruSeq Adapter, Index 23 (95% over 24bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTCTCTTGT 2461 0.11395053685473366 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCT 2388 0.11057045185254123 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3890760282982568E-4 0.0 0.0 0.21502896918057016 0.0 2 1.3890760282982568E-4 0.0 0.0 1.1300596515549086 0.0 3 1.3890760282982568E-4 0.0 0.0 1.605771888712785 0.0 4 1.3890760282982568E-4 0.0 0.0 2.252664595091283 0.0 5 1.3890760282982568E-4 0.0 0.0 4.3477616660392675 0.0 6 1.3890760282982568E-4 0.0 0.0 5.3234023657816865 0.0 7 1.3890760282982568E-4 0.0 0.0 6.381924601879235 0.0 8 1.8521013710643425E-4 0.0 0.0 7.868837885103965 0.0 9 1.8521013710643425E-4 0.0 0.0 8.419097202447182 0.0 10 1.8521013710643425E-4 0.0 0.0 10.170166443719964 0.0 11 1.8521013710643425E-4 0.0 0.0 11.96939032064042 0.0 12 3.2411773993625996E-4 0.0 0.0 13.904882555936934 0.0 13 3.2411773993625996E-4 0.0 0.0 14.460698177393343 0.0 14 3.2411773993625996E-4 0.0 0.0 14.68410790527798 0.0 15 3.2411773993625996E-4 0.0 0.0 15.152458039485875 0.0 16 3.704202742128685E-4 0.0 0.0 15.998405340719513 0.0 17 3.704202742128685E-4 0.0 0.0 16.957377128122353 0.0 18 3.704202742128685E-4 0.0 0.0 18.050487357324528 0.0 19 3.704202742128685E-4 0.0 0.0 18.809941524529464 0.0 20 3.704202742128685E-4 0.0 0.0 19.42965464328759 0.0 21 3.704202742128685E-4 0.0 0.0 20.174755024866776 0.0 22 3.704202742128685E-4 0.0 0.0 20.976576010934807 0.0 23 3.704202742128685E-4 0.0 0.0 21.750013543491274 0.0 24 4.1672280848947704E-4 0.0 0.0 22.37852414376196 0.0 25 4.1672280848947704E-4 0.0 0.0 22.929246486447944 0.0 26 4.1672280848947704E-4 0.0 0.0 23.463716639602836 0.0 27 4.1672280848947704E-4 0.0 0.0 24.04648033600823 0.0 28 4.1672280848947704E-4 0.0 0.0 24.54742745434686 0.0 29 4.1672280848947704E-4 0.0 0.0 25.119124845060146 0.0 30 4.1672280848947704E-4 0.0 0.0 25.769212426303728 0.0 31 4.1672280848947704E-4 0.0 0.0 26.299793166579388 0.0 32 4.1672280848947704E-4 0.0 0.0 26.846718701454687 0.0 33 4.1672280848947704E-4 0.0 0.0 27.351647837741105 0.0 34 4.1672280848947704E-4 0.0 0.0 27.878709585411737 0.0 35 4.6302534276608564E-4 0.0 0.0 28.46207521476273 0.0 36 4.6302534276608564E-4 0.0 0.0 28.947881404392906 0.0 37 4.6302534276608564E-4 0.0 0.0 29.455496087667367 0.0 38 5.093278770426942E-4 0.0 0.0 30.013210113029118 0.0 39 5.093278770426942E-4 0.0 0.0 30.817901856222296 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGAT 20 7.034664E-4 45.000004 27 TAGCGTC 30 2.1663927E-6 45.000004 31 CGCATAT 20 7.034664E-4 45.000004 20 CGCGATC 20 7.034664E-4 45.000004 44 ATATCCG 45 3.8562575E-10 45.000004 1 TACGATA 20 7.034664E-4 45.000004 17 TTACGTA 20 7.034664E-4 45.000004 1 GTATACG 50 2.1827873E-11 45.000004 1 TCGCACT 35 1.2125929E-7 45.0 1 ACGGGTA 165 0.0 40.90909 5 TATCGAG 45 1.929584E-8 40.000004 1 GTTATCG 90 0.0 40.000004 1 TACCGGT 80 0.0 39.375004 40 AAATCGA 35 6.2508407E-6 38.571426 1 CAAACGC 35 6.2508407E-6 38.571426 15 ATTACGA 35 6.2508407E-6 38.571426 21 GCCGAAT 35 6.2508407E-6 38.571426 29 TCGCTAC 35 6.2508407E-6 38.571426 27 TTACGCG 35 6.2508407E-6 38.571426 1 CTAGCGT 35 6.2508407E-6 38.571426 30 >>END_MODULE