##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935013.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1742652 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.20531637986242 33.0 31.0 34.0 30.0 34.0 2 32.37772486991092 34.0 31.0 34.0 30.0 34.0 3 32.40363882174984 34.0 31.0 34.0 30.0 34.0 4 35.94378625221788 37.0 35.0 37.0 35.0 37.0 5 35.83604242269828 37.0 35.0 37.0 35.0 37.0 6 35.73528392358314 37.0 35.0 37.0 35.0 37.0 7 35.957864220739424 37.0 35.0 37.0 35.0 37.0 8 35.409727243305035 37.0 35.0 37.0 33.0 37.0 9 37.351560150850545 39.0 37.0 39.0 34.0 39.0 10 37.28997700057154 39.0 37.0 39.0 34.0 39.0 11 37.21031049228417 39.0 37.0 39.0 34.0 39.0 12 36.93023736236495 39.0 35.0 39.0 33.0 39.0 13 36.70653062114524 39.0 35.0 39.0 33.0 39.0 14 37.651739991690825 40.0 36.0 41.0 32.0 41.0 15 37.67424018105738 40.0 36.0 41.0 32.0 41.0 16 37.98257999876051 40.0 36.0 41.0 33.0 41.0 17 37.8699792041096 40.0 36.0 41.0 33.0 41.0 18 37.94166936370543 40.0 36.0 41.0 33.0 41.0 19 37.90878327973686 40.0 36.0 41.0 33.0 41.0 20 37.63250149771727 40.0 35.0 41.0 32.0 41.0 21 37.78919141630113 40.0 36.0 41.0 33.0 41.0 22 37.77049405159492 40.0 35.0 41.0 33.0 41.0 23 37.4506637010717 39.0 35.0 41.0 33.0 41.0 24 37.2784531851454 39.0 35.0 41.0 32.0 41.0 25 37.31440069503263 39.0 35.0 41.0 32.0 41.0 26 37.405857853432586 39.0 35.0 41.0 33.0 41.0 27 37.359398204575555 39.0 35.0 41.0 33.0 41.0 28 37.34038465511186 39.0 35.0 41.0 33.0 41.0 29 37.32525139844329 39.0 35.0 41.0 33.0 41.0 30 37.272585117395785 39.0 35.0 41.0 32.0 41.0 31 37.28354771922334 39.0 35.0 41.0 32.0 41.0 32 37.03220608589667 39.0 35.0 41.0 32.0 41.0 33 36.88217326236104 39.0 35.0 41.0 31.0 41.0 34 36.698732736082704 39.0 35.0 41.0 31.0 41.0 35 36.655228926945824 39.0 35.0 41.0 31.0 41.0 36 36.5998036326243 39.0 35.0 41.0 31.0 41.0 37 36.504917218125016 39.0 35.0 41.0 31.0 41.0 38 36.42514053293486 39.0 35.0 41.0 30.0 41.0 39 36.32986448240957 39.0 35.0 41.0 30.0 41.0 40 36.16221827421654 39.0 35.0 41.0 30.0 41.0 41 36.10976029637587 38.0 35.0 41.0 30.0 41.0 42 36.14544039773862 39.0 35.0 41.0 30.0 41.0 43 36.06457743714752 38.0 35.0 40.0 30.0 41.0 44 36.08484941342276 38.0 35.0 40.0 30.0 41.0 45 36.08291959610984 38.0 35.0 40.0 30.0 41.0 46 35.98058419007352 38.0 35.0 40.0 30.0 41.0 47 35.6903673252032 38.0 35.0 40.0 29.0 41.0 48 35.681872226927695 38.0 35.0 40.0 29.0 41.0 49 35.72166445165185 38.0 35.0 40.0 29.0 41.0 50 35.60044403587176 37.0 35.0 40.0 29.0 41.0 51 34.519205785205536 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 17.0 10 27.0 11 18.0 12 16.0 13 31.0 14 25.0 15 64.0 16 130.0 17 247.0 18 509.0 19 1061.0 20 2247.0 21 4676.0 22 8124.0 23 10638.0 24 12132.0 25 13155.0 26 14088.0 27 14913.0 28 16715.0 29 20199.0 30 26182.0 31 35022.0 32 48564.0 33 70945.0 34 130609.0 35 149602.0 36 131102.0 37 199063.0 38 335950.0 39 496171.0 40 401.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.804608148959176 18.044337021964225 22.46254559143191 9.688509237644693 2 27.08251561413294 34.55692817613614 22.63354932596984 15.72700688376107 3 27.695259868292695 34.61632041279613 23.047343933269524 14.641075785641656 4 24.50351533180463 22.036241314961337 36.08333735019958 17.376906003034456 5 33.27089975508593 25.826039851903882 21.97042209230529 18.9326383007049 6 23.897771901676297 39.435527001374915 22.59579078324301 14.07091031370578 7 72.53077493383647 5.324470978715199 17.48306603957646 4.661688047871864 8 71.98207100442315 12.491076818550118 9.101874614093921 6.424977562932817 9 67.67139968278232 5.8051751009381105 9.134927684930783 17.388497531348772 10 46.70559583898564 19.72671537403911 17.325260579851857 16.242428207123396 11 36.68512129788392 19.943683535209555 23.087914282369628 20.2832808845369 12 28.706649405618563 18.267617401523655 28.513323371505038 24.512409821352744 13 26.459499659140207 21.116895398507562 35.14786658495213 17.2757383574001 14 21.274987777249844 28.71870000436117 28.732644268620472 21.273667949768512 15 17.037767724135396 21.152071670075266 39.40970428978361 22.40045631600572 16 21.276824058963008 22.809717602826037 26.984389310086005 28.92906902812495 17 22.52388887741213 24.091270087200428 29.280315289570147 24.104525745817295 18 22.609735047502312 22.49261470448489 29.31313882519287 25.584511422819933 19 22.88603806152921 24.60910153031127 26.404066904924218 26.1007935032353 20 24.13356195040662 26.52537626559979 30.770113596977485 18.57094818701611 21 21.2826772069237 30.374509655398786 29.649235762504507 18.693577375173014 22 20.720832386500575 20.84202697956907 31.697780164944007 26.73936046898635 23 20.563371229597188 27.972767942193848 29.37350658651297 22.09035424169599 24 22.60611986787953 24.99041690480945 26.130920000091812 26.272543227219202 25 20.312374472929765 32.779464861601745 24.2079887435931 22.700171921875395 26 19.98017963425859 23.699568244262192 28.979968461861578 27.340283659617644 27 23.97403497657593 25.449315181688597 25.985968512359324 24.590681329376146 28 17.818646522656273 25.720797956218455 29.991243231580373 26.4693122895449 29 23.38143243745739 25.028519750357503 26.61845279493554 24.97159501724957 30 24.49708834580857 26.871457984726728 27.68860334708249 20.94285032238221 31 24.840071339544558 22.6181130828186 22.81132434932505 29.730491228311788 32 30.612595056270557 26.058329488618497 23.014577781450342 20.314497673660608 33 24.84701477977244 21.955617070992947 24.982899626546207 28.214468522688406 34 23.39772943766168 24.6891519362443 25.595184810277672 26.317933815816353 35 24.615872819128544 24.279948033227516 27.149941583288 23.954237564355935 36 23.0237018062126 29.936154780185603 23.19063129069946 23.849512122902336 37 26.76518318057765 23.46205668142578 27.483456249440508 22.289303888556063 38 21.945460137767036 23.94534307480782 26.222160247714406 27.887036539710742 39 25.939315480084378 23.47858321684421 24.459961024920638 26.122140278150773 40 22.454913545561592 20.622820850060712 33.06667079830052 23.855594806077175 41 20.59510447295272 25.75270335098459 24.18509260598215 29.467099570080546 42 21.10145915535632 21.635817133885595 33.599594181741395 23.663129529016693 43 22.91788607249181 25.638222662929834 26.08277498892493 25.36111627565343 44 24.364589143443443 20.42203492148748 28.519119135662198 26.69425679940688 45 20.739826425471065 19.918664196867763 27.821848538893594 31.519660838767578 46 27.44627154474904 24.00944078335778 25.350901958623982 23.1933857132692 47 18.45331138976686 22.655183019903 36.10290522720543 22.788600363124708 48 21.967839821146164 24.81539630402398 26.31833550244111 26.89842837238875 49 22.112561773664506 19.86495295675786 34.17343221710359 23.849053052474044 50 22.52371672600152 21.986604324902505 28.438437507890274 27.051241441205704 51 21.528337269862256 21.991481948203084 25.33167838443935 31.14850239749531 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 512.0 1 1138.0 2 1764.0 3 2932.5 4 4101.0 5 2989.0 6 1877.0 7 1952.5 8 2028.0 9 2206.0 10 2384.0 11 2675.5 12 2967.0 13 2904.0 14 2841.0 15 2643.0 16 2445.0 17 2647.0 18 2849.0 19 2742.5 20 2636.0 21 3034.5 22 3433.0 23 3765.0 24 4097.0 25 5501.5 26 7944.0 27 8982.0 28 11190.5 29 13399.0 30 16301.5 31 19204.0 32 22484.0 33 25764.0 34 27877.5 35 29991.0 36 33455.5 37 36920.0 38 41427.0 39 45934.0 40 52585.5 41 59237.0 42 66446.5 43 73656.0 44 84317.0 45 94978.0 46 184446.5 47 273915.0 48 227703.0 49 181491.0 50 173554.5 51 165618.0 52 147128.0 53 128638.0 54 117605.0 55 106572.0 56 102319.5 57 98067.0 58 89196.0 59 80325.0 60 73571.0 61 66817.0 62 60482.0 63 54147.0 64 47895.0 65 41643.0 66 36907.5 67 32172.0 68 26259.0 69 20346.0 70 19159.0 71 17972.0 72 14383.5 73 10795.0 74 9189.5 75 5667.0 76 3750.0 77 2937.5 78 2125.0 79 1568.0 80 1011.0 81 716.5 82 422.0 83 299.5 84 177.0 85 151.0 86 125.0 87 70.5 88 16.0 89 16.0 90 16.0 91 9.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1742652.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.307615496655487 #Duplication Level Percentage of deduplicated Percentage of total 1 69.1851002913022 14.049844148133129 2 12.017461432392839 4.88091972029841 3 5.302119439944749 3.2302020871122092 4 2.7661363521596143 2.2469453380391466 5 1.6644976087189602 1.690098871648358 6 1.109500491165819 1.3518785620767517 7 0.7987749098167345 1.1354849615853737 8 0.6140290883556927 0.9975573304071444 9 0.4520630045494589 0.826228950898791 >10 3.829096255014407 17.41377716237314 >50 1.7245524398690406 25.609815815458433 >100 0.5241016711747344 13.84522199798634 >500 0.005426665799474467 0.7551781079732663 >1k 0.004284209841690369 1.7751325648634269 >5k 0.0017136839366761476 2.4390744851376187 >10k+ 0.0011424559577840985 7.752639896008502 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGC 44352 2.5450864544384078 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCG 41017 2.3537114696451154 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTC 37878 2.1735837103449227 No Hit GCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGC 10416 0.5977096976332624 TruSeq Adapter, Index 16 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCGTCTAT 9968 0.572001753649036 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCT 8800 0.5049774711187316 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCGTCTATCGTA 6280 0.36037028620745853 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTC 6006 0.34464712403853437 No Hit GAACTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCT 5850 0.33569525068688416 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGC 5148 0.29541182060445803 No Hit CCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGC 4059 0.232920858553515 TruSeq Adapter, Index 16 (95% over 21bp) GAATGATCCCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCG 4030 0.2312567282509646 No Hit CTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGCT 3385 0.19424417497010305 TruSeq Adapter, Index 13 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2024 0.11614481835730828 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATG 1958 0.1123574873239178 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTT 1946 0.11166888168148317 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAGCGTCTA 1866 0.1070781773985856 No Hit TCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGC 1789 0.1026596245262967 TruSeq Adapter, Index 16 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7215141060865854E-4 0.0 0.0 0.20331081592882572 0.0 2 1.7215141060865854E-4 0.0 0.0 1.2649111813488867 0.0 3 2.2953521414487805E-4 0.0 0.0 1.6618923342124532 0.0 4 2.2953521414487805E-4 0.0 0.0 2.4469601503914724 0.0 5 2.2953521414487805E-4 0.0 0.0 5.865255943240532 0.0 6 2.2953521414487805E-4 0.0 0.0 6.630182044378338 0.0 7 2.2953521414487805E-4 0.0 0.0 7.874262905043577 0.0 8 2.2953521414487805E-4 0.0 0.0 9.223183974769489 0.0 9 2.2953521414487805E-4 0.0 0.0 9.622690014988649 0.0 10 2.2953521414487805E-4 0.0 0.0 13.143415897149861 0.0 11 2.2953521414487805E-4 0.0 0.0 14.537440636455242 0.0 12 2.2953521414487805E-4 0.0 0.0 18.556200549507302 0.0 13 2.8691901768109753E-4 0.0 0.0 19.131760098975583 0.0 14 2.8691901768109753E-4 0.0 0.0 19.41764620819303 0.0 15 2.8691901768109753E-4 0.0 0.0 20.151929358242494 0.0 16 2.8691901768109753E-4 0.0 0.0 20.897517117588595 0.0 17 2.8691901768109753E-4 0.0 0.0 21.68510982112321 0.0 18 2.8691901768109753E-4 0.0 0.0 22.514076247007434 0.0 19 2.8691901768109753E-4 0.0 0.0 23.770265090218818 0.0 20 2.8691901768109753E-4 0.0 0.0 24.422661552622095 0.0 21 2.8691901768109753E-4 0.0 0.0 25.061228518373145 0.0 22 2.8691901768109753E-4 0.0 0.0 25.788568228194727 0.0 23 3.443028212173171E-4 0.0 0.0 26.424897225607868 0.0 24 4.0168662475353656E-4 0.0 0.0 26.93785104541813 0.0 25 4.0168662475353656E-4 0.0 0.0 27.398183917385687 0.0 26 4.0168662475353656E-4 0.0 0.0 27.857024810461297 0.0 27 4.0168662475353656E-4 0.0 0.0 28.472753022404934 0.0 28 4.590704282897561E-4 0.0 0.0 28.914895228651503 0.0 29 4.590704282897561E-4 0.0 0.0 29.42543892871325 0.0 30 4.590704282897561E-4 0.0 0.0 29.982578277246404 0.0 31 4.590704282897561E-4 0.0 0.0 30.419383789764108 0.0 32 4.590704282897561E-4 0.0 0.0 30.840810442934103 0.0 33 4.590704282897561E-4 0.0 0.0 31.26217971230056 0.0 34 4.590704282897561E-4 0.0 0.0 31.733472890743535 0.0 35 4.590704282897561E-4 0.0 0.0 32.23988495695067 0.0 36 4.590704282897561E-4 0.0 0.0 32.67364912788096 0.0 37 5.164542318259756E-4 0.0 0.0 33.14907394017853 0.0 38 5.164542318259756E-4 0.0 0.0 33.70604113730108 0.0 39 5.164542318259756E-4 0.0 0.0 34.60180231050146 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAGTCG 30 2.166149E-6 45.000004 1 AACGGTA 20 7.0342893E-4 45.000004 44 CGTAGTC 25 3.8916372E-5 45.000004 18 CGCTAGC 20 7.0342893E-4 45.000004 21 CGATCGC 25 3.8916372E-5 45.000004 34 TGTCGAT 35 1.212411E-7 45.000004 18 GCGTAAA 20 7.0342893E-4 45.000004 1 TCGCGGA 20 7.0342893E-4 45.000004 41 GTCGGTA 20 7.0342893E-4 45.000004 45 TTAACGG 125 0.0 44.999996 2 AACGTAG 105 0.0 42.857143 1 CGATGAA 2860 0.0 42.482517 19 TGATCCG 1210 0.0 42.210747 4 GATGAAT 3000 0.0 42.149998 20 GATCCGG 1225 0.0 41.877552 5 AATGATC 2505 0.0 41.766468 2 ATCGAAT 415 0.0 41.746986 43 CCGATGA 2915 0.0 41.29503 18 TTTACGG 180 0.0 41.250004 2 TGAATGA 2980 0.0 41.22483 22 >>END_MODULE