SRR2935008.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935008.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	696114
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	7910	1.136308133437914	No Hit
GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	6802	0.9771388019778369	No Hit
CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT	5200	0.747004082664621	No Hit
TCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	2944	0.4229192344932008	No Hit
ACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	2443	0.3509482642210902	No Hit
CGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	1553	0.22309564238041468	No Hit
ACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	1413	0.2029839940009826	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1399	0.2009728291630394	No Hit
AAAACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC	1332	0.19134796886716832	No Hit
GCCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	1087	0.15615258420316214	No Hit
AGACATAGACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCC	1047	0.1504063989518958	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCC	1028	0.1476769609575443	No Hit
AGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	981	0.1409251932873064	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC	959	0.13776479139910994	No Hit
GGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG	923	0.13259322467297024	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	768	0.11032675682431327	No Hit
GGCCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT	701	0.10070189652844218	No Hit

Adapter graph

$Kmer graph$

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTGA	35	1.2110104E-7	45.000004	24
CGGCCTA	35	1.2110104E-7	45.000004	19
AACCACG	45	3.8380676E-10	45.000004	1
CGCGCCA	35	1.2110104E-7	45.000004	15
CAATTGC	45	3.8380676E-10	45.000004	24
TACGGGT	35	1.2110104E-7	45.000004	4
CATTCGA	35	1.2110104E-7	45.000004	10
TACATTC	35	1.2110104E-7	45.000004	14
CTTGGGT	35	1.2110104E-7	45.000004	4
CTGCGGC	35	1.2110104E-7	45.000004	21
ACGATTC	35	1.2110104E-7	45.000004	42
AGACGAC	35	1.2110104E-7	45.000004	10
GCATTCG	35	1.2110104E-7	45.000004	9
GTTCGGA	35	1.2110104E-7	45.000004	29
TTCTTCG	45	3.8380676E-10	45.000004	1
TACGATT	35	1.2110104E-7	45.000004	41
CTTGCGC	35	1.2110104E-7	45.000004	11
GCTTAGC	35	1.2110104E-7	45.000004	12
GGTATCG	35	1.2110104E-7	45.000004	8
GGTGCGA	35	1.2110104E-7	45.000004	8