##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935008.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 696114 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.18512628678636 33.0 31.0 34.0 30.0 34.0 2 32.370684974012875 34.0 31.0 34.0 30.0 34.0 3 32.36502354499407 34.0 31.0 34.0 30.0 34.0 4 35.90860261393967 37.0 35.0 37.0 35.0 37.0 5 35.83293397345837 37.0 35.0 37.0 35.0 37.0 6 35.77595049086788 37.0 35.0 37.0 35.0 37.0 7 36.052856285033776 37.0 35.0 37.0 35.0 37.0 8 35.77838112722916 37.0 35.0 37.0 35.0 37.0 9 37.50963347957375 39.0 37.0 39.0 35.0 39.0 10 37.41982204064277 39.0 37.0 39.0 34.0 39.0 11 37.342241357019105 39.0 37.0 39.0 35.0 39.0 12 37.03680144344173 39.0 35.0 39.0 34.0 39.0 13 36.81395432357344 39.0 35.0 39.0 33.0 39.0 14 37.82550702902111 40.0 36.0 41.0 33.0 41.0 15 37.96818911844899 40.0 36.0 41.0 33.0 41.0 16 38.05942561132228 40.0 36.0 41.0 34.0 41.0 17 38.095991461168715 40.0 36.0 41.0 34.0 41.0 18 38.11209945497433 40.0 36.0 41.0 34.0 41.0 19 38.058481800394766 40.0 36.0 41.0 34.0 41.0 20 38.01172796409784 40.0 36.0 41.0 34.0 41.0 21 37.92933915996518 40.0 35.0 41.0 34.0 41.0 22 37.855729090350145 39.0 35.0 41.0 34.0 41.0 23 37.63662561017305 39.0 35.0 41.0 33.0 41.0 24 37.42308012768024 39.0 35.0 41.0 33.0 41.0 25 37.380634493775446 39.0 35.0 41.0 33.0 41.0 26 37.56683531720379 39.0 35.0 41.0 33.0 41.0 27 37.58729604633724 39.0 35.0 41.0 33.0 41.0 28 37.63637996075355 39.0 35.0 41.0 33.0 41.0 29 37.705611437207125 39.0 36.0 41.0 34.0 41.0 30 37.61360782860279 39.0 36.0 41.0 34.0 41.0 31 37.525872199093826 39.0 35.0 41.0 33.0 41.0 32 37.41258184722617 39.0 35.0 41.0 33.0 41.0 33 37.2693294489121 39.0 35.0 41.0 33.0 41.0 34 37.22309851547304 39.0 35.0 41.0 33.0 41.0 35 37.168156365193056 39.0 35.0 41.0 33.0 41.0 36 37.04922182286235 39.0 35.0 41.0 33.0 41.0 37 36.99290058812206 39.0 35.0 41.0 33.0 41.0 38 36.91080914907616 39.0 35.0 41.0 32.0 41.0 39 36.88376329164476 39.0 35.0 41.0 32.0 41.0 40 36.829789373579615 39.0 35.0 41.0 32.0 41.0 41 36.8079423772543 39.0 35.0 41.0 32.0 41.0 42 36.783995150219646 39.0 35.0 41.0 32.0 41.0 43 36.670558270628085 39.0 35.0 41.0 32.0 41.0 44 36.529999396650545 39.0 35.0 41.0 31.0 41.0 45 36.565214892962935 39.0 35.0 41.0 31.0 41.0 46 36.454909684333316 39.0 35.0 41.0 31.0 41.0 47 36.400056599924724 39.0 35.0 40.0 31.0 41.0 48 36.37675581873084 39.0 35.0 40.0 31.0 41.0 49 36.3384632402164 39.0 35.0 40.0 31.0 41.0 50 36.26609147352301 39.0 35.0 40.0 31.0 41.0 51 35.30018071752615 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 13.0 11 9.0 12 7.0 13 10.0 14 21.0 15 25.0 16 48.0 17 89.0 18 193.0 19 392.0 20 683.0 21 1132.0 22 1740.0 23 2644.0 24 3443.0 25 4005.0 26 4567.0 27 5030.0 28 5642.0 29 6715.0 30 8618.0 31 11247.0 32 15160.0 33 22736.0 34 48633.0 35 77681.0 36 47117.0 37 73279.0 38 143070.0 39 212021.0 40 133.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.40577836388867 23.85270228726904 25.893890943150115 11.84762840569217 2 31.083270843568727 24.163714563993828 26.39495829706054 18.358056295376908 3 29.917800819980634 25.619079633508306 27.60883993139055 16.85427961512051 4 28.733224730432084 26.343386284430427 26.1023338131398 18.82105517199769 5 23.59627877043128 30.667103376745764 25.550700029018238 20.185917823804722 6 25.258075545097498 31.885438304645504 25.853093027866127 17.00339312239087 7 74.27964385143812 7.486992073137445 11.528284160353046 6.705079915071383 8 73.09320025168292 5.865993213755218 11.498547651677743 9.542258882884125 9 67.59855425979077 8.414282718060548 14.343483969579696 9.643679052568977 10 39.21311739169159 26.415644563965095 20.661558307978293 13.709679736365022 11 32.76244982862003 23.040191692739985 25.16110866898238 19.036249809657612 12 29.05414917671531 21.63553670806793 30.965617700549046 18.344696414667713 13 22.46815895097642 29.897976480863765 29.453221742415753 18.18064282574406 14 15.832751532076642 34.07545315853438 28.326107505379866 21.76568780400911 15 12.914695006852325 27.713564157594877 40.42470055192109 18.947040283631704 16 14.241632836001001 27.783523963029044 35.07026148015986 22.904581720810096 17 15.322346627132912 26.661293983456737 27.161930373473307 30.854429015937047 18 17.532042165507374 26.898898743596593 32.833558871104444 22.735500219791586 19 20.465469736278827 27.455273130550456 27.787115328811083 24.29214180435963 20 22.80416713354422 28.220234042125288 28.38529321346791 20.59030561086259 21 19.7921604794617 29.94006728782929 30.274064305559143 19.993707927149863 22 16.781590371691994 28.36546887435104 26.046595816202515 28.806344937754446 23 17.000232720502677 28.557535116374616 28.471773301499464 25.970458861623243 24 21.144381523715943 24.802115745409516 29.498185642006913 24.55531708886763 25 16.439548694610366 28.727191235918255 28.152429056160344 26.68083101331104 26 15.633502558488981 31.313261908250663 30.06016255958076 22.9930729736796 27 18.83125465081869 32.96054956515743 28.408277954472975 19.799917829550907 28 15.494732184670902 26.939840313511866 33.88985137491848 23.675576126898758 29 18.675963994403215 23.808743970096852 33.65382681572271 23.86146521977722 30 19.693469747771196 28.711676535739837 27.717299178008197 23.877554538480766 31 20.577951312572367 27.79401075111261 29.44862479421474 22.179413142100287 32 24.001241176014272 26.867725688608473 25.190845177657685 23.94018795771957 33 21.258012337059736 29.498185642006913 24.02278937070652 25.221012650226832 34 17.383072312868293 24.40275587044651 33.15132291549947 25.062848901185724 35 18.417816621990077 24.460792341484296 28.457264183740023 28.66412685278561 36 20.484001183714163 28.016819084230455 29.700738672114053 21.798441059941332 37 19.365362569923892 27.187788207104006 33.683706979029296 19.763142243942802 38 19.560732868466946 27.467483774209395 26.339938573279664 26.631844784043995 39 21.860068896761163 24.93499627934505 29.538121629503213 23.666813194390574 40 21.11205923167757 21.463294805161222 32.33249151719402 25.092154445967186 41 15.849271814674031 25.134819871457836 28.722450633085963 30.293457680782172 42 20.022582508037477 24.05798475537053 29.804600970530686 26.114831766061307 43 23.182409777708823 24.36253257368764 29.017517245738482 23.437540402865046 44 19.636151549889817 24.1889977790994 29.78736241477689 26.387488256233894 45 20.438175356335314 23.169337206262192 26.808252671257872 29.584234766144625 46 21.94223934585427 23.33037404792893 29.661089993880314 25.066296612336487 47 17.02565959023953 23.052833300292768 34.198277868280194 25.723229241187507 48 18.574974788612213 20.82704844321476 31.923794091197706 28.674182676975324 49 20.52551737215456 19.504276598373256 35.72963623774267 24.240569791729516 50 19.40932088709608 19.68844183567634 32.57095820512158 28.331279072106007 51 17.249473505776354 20.723473454060684 28.01279675455457 34.01425628560839 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1633.0 1 1529.5 2 1426.0 3 1821.0 4 2216.0 5 1817.0 6 1418.0 7 1508.5 8 1599.0 9 1867.5 10 2136.0 11 2131.5 12 2127.0 13 2206.5 14 2286.0 15 2390.5 16 2495.0 17 2416.0 18 2337.0 19 2470.5 20 2604.0 21 2327.5 22 2051.0 23 2352.0 24 2653.0 25 2884.5 26 3417.0 27 3718.0 28 4714.0 29 5710.0 30 6558.0 31 7406.0 32 8497.0 33 9588.0 34 11419.5 35 13251.0 36 14213.0 37 15175.0 38 18272.0 39 21369.0 40 26981.0 41 32593.0 42 43228.0 43 53863.0 44 68755.0 45 83647.0 46 96570.0 47 109493.0 48 104212.0 49 98931.0 50 78873.5 51 58816.0 52 48080.0 53 37344.0 54 32635.5 55 27927.0 56 24218.5 57 20510.0 58 18302.5 59 16095.0 60 15475.5 61 14856.0 62 13368.0 63 11880.0 64 11060.5 65 10241.0 66 8035.0 67 5829.0 68 4508.0 69 3187.0 70 2636.0 71 2085.0 72 1609.0 73 1133.0 74 837.0 75 404.0 76 267.0 77 298.5 78 330.0 79 185.0 80 40.0 81 63.5 82 87.0 83 91.0 84 95.0 85 48.5 86 2.0 87 2.5 88 3.0 89 3.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 696114.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.653065623016595 #Duplication Level Percentage of deduplicated Percentage of total 1 63.492985240326426 13.748177760100122 2 12.699873282735693 5.499823791901423 3 6.319316163620117 4.1049770275036765 4 3.81887042529332 3.307610076986942 5 2.6124640049255876 2.828392726821125 6 1.7794122462933457 2.311783808363351 7 1.3319766434731195 2.0188964368614184 8 1.0072545868584597 1.744811973466456 9 0.7373182662856022 1.436868072443787 >10 4.458154586423197 18.660721685605044 >50 1.0399337747875856 16.40330676406661 >100 0.684360797059184 21.477703712904578 >500 0.010044434399107396 1.5041801853657475 >1k 0.006026660639464438 2.065601592512092 >5k 0.0020088868798214792 2.887144385097625 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 7910 1.136308133437914 No Hit GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 6802 0.9771388019778369 No Hit CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 5200 0.747004082664621 No Hit TCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 2944 0.4229192344932008 No Hit ACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 2443 0.3509482642210902 No Hit CGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG 1553 0.22309564238041468 No Hit ACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG 1413 0.2029839940009826 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1399 0.2009728291630394 No Hit AAAACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC 1332 0.19134796886716832 No Hit GCCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG 1087 0.15615258420316214 No Hit AGACATAGACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCC 1047 0.1504063989518958 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCC 1028 0.1476769609575443 No Hit AGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG 981 0.1409251932873064 No Hit CGTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC 959 0.13776479139910994 No Hit GGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG 923 0.13259322467297024 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 768 0.11032675682431327 No Hit GGCCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT 701 0.10070189652844218 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7682649680943064 0.0 2 0.0 0.0 0.0 3.757861499696889 0.0 3 0.0 0.0 0.0 5.098877482711165 0.0 4 1.436546312816579E-4 0.0 0.0 6.507267487796539 0.0 5 1.436546312816579E-4 0.0 0.0 10.231801113036083 0.0 6 1.436546312816579E-4 0.0 0.0 11.97303889880106 0.0 7 1.436546312816579E-4 0.0 0.0 13.897579994081429 0.0 8 1.436546312816579E-4 0.0 0.0 16.694248355872745 0.0 9 1.436546312816579E-4 0.0 0.0 17.591802492120543 0.0 10 1.436546312816579E-4 0.0 0.0 19.65540127048156 0.0 11 1.436546312816579E-4 0.0 0.0 23.059585067963006 0.0 12 2.873092625633158E-4 0.0 0.0 25.62640601970367 0.0 13 2.873092625633158E-4 0.0 0.0 26.574670240793893 0.0 14 2.873092625633158E-4 0.0 0.0 26.95320019422106 0.0 15 2.873092625633158E-4 0.0 0.0 27.642455115110454 0.0 16 2.873092625633158E-4 0.0 0.0 29.073686206569615 0.0 17 2.873092625633158E-4 0.0 0.0 30.75789310371577 0.0 18 2.873092625633158E-4 0.0 0.0 32.83643196373008 0.0 19 2.873092625633158E-4 0.0 0.0 33.876922458103124 0.0 20 2.873092625633158E-4 0.0 0.0 34.90922463849312 0.0 21 2.873092625633158E-4 0.0 0.0 36.06952309535507 0.0 22 2.873092625633158E-4 0.0 0.0 37.20382006395504 0.0 23 2.873092625633158E-4 0.0 0.0 38.27289782995314 0.0 24 2.873092625633158E-4 0.0 0.0 39.04575974624846 0.0 25 2.873092625633158E-4 0.0 0.0 39.76647503138854 0.0 26 2.873092625633158E-4 0.0 0.0 40.405881795223195 0.0 27 2.873092625633158E-4 0.0 0.0 41.05103474430912 0.0 28 7.182731564082895E-4 0.0 0.0 41.697767894339144 0.0 29 7.182731564082895E-4 0.0 0.0 42.350821848145564 0.0 30 7.182731564082895E-4 0.0 0.0 43.15284565459106 0.0 31 8.619277876899473E-4 0.0 0.0 43.88692082044033 0.0 32 8.619277876899473E-4 0.0 0.0 44.492856055186365 0.0 33 8.619277876899473E-4 0.0 0.0 45.05468931812893 0.0 34 8.619277876899473E-4 0.0 0.0 45.637783466501176 0.0 35 8.619277876899473E-4 0.0 0.0 46.30204248154756 0.0 36 8.619277876899473E-4 0.0 0.0 46.889877232752106 0.0 37 8.619277876899473E-4 0.0 0.0 47.50960331210118 0.0 38 8.619277876899473E-4 0.0 0.0 48.01957725315106 0.0 39 8.619277876899473E-4 0.0 0.0 48.58658208281977 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTGA 35 1.2110104E-7 45.000004 24 CGGCCTA 35 1.2110104E-7 45.000004 19 AACCACG 45 3.8380676E-10 45.000004 1 CGCGCCA 35 1.2110104E-7 45.000004 15 CAATTGC 45 3.8380676E-10 45.000004 24 TACGGGT 35 1.2110104E-7 45.000004 4 CATTCGA 35 1.2110104E-7 45.000004 10 TACATTC 35 1.2110104E-7 45.000004 14 CTTGGGT 35 1.2110104E-7 45.000004 4 CTGCGGC 35 1.2110104E-7 45.000004 21 ACGATTC 35 1.2110104E-7 45.000004 42 AGACGAC 35 1.2110104E-7 45.000004 10 GCATTCG 35 1.2110104E-7 45.000004 9 GTTCGGA 35 1.2110104E-7 45.000004 29 TTCTTCG 45 3.8380676E-10 45.000004 1 TACGATT 35 1.2110104E-7 45.000004 41 CTTGCGC 35 1.2110104E-7 45.000004 11 GCTTAGC 35 1.2110104E-7 45.000004 12 GGTATCG 35 1.2110104E-7 45.000004 8 GGTGCGA 35 1.2110104E-7 45.000004 8 >>END_MODULE