##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935006.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1651458 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27764436031676 33.0 31.0 34.0 30.0 34.0 2 32.44111566870002 34.0 31.0 34.0 31.0 34.0 3 32.443693390930925 34.0 31.0 34.0 30.0 34.0 4 35.97420218982257 37.0 35.0 37.0 35.0 37.0 5 35.89829048029075 37.0 35.0 37.0 35.0 37.0 6 35.83059877998714 37.0 35.0 37.0 35.0 37.0 7 36.115157030938725 37.0 35.0 37.0 35.0 37.0 8 35.84657920455743 37.0 35.0 37.0 35.0 37.0 9 37.584090543023194 39.0 38.0 39.0 35.0 39.0 10 37.37712978471145 39.0 37.0 39.0 34.0 39.0 11 37.33749995458558 39.0 37.0 39.0 34.0 39.0 12 37.179158053065834 39.0 37.0 39.0 34.0 39.0 13 37.121145678545865 39.0 37.0 39.0 33.0 39.0 14 38.244113383446624 40.0 37.0 41.0 33.0 41.0 15 38.31036817163985 40.0 37.0 41.0 34.0 41.0 16 38.366305410128504 40.0 37.0 41.0 34.0 41.0 17 38.388147321942185 40.0 37.0 41.0 34.0 41.0 18 38.39467185965371 40.0 37.0 41.0 34.0 41.0 19 38.35089236299076 40.0 37.0 41.0 34.0 41.0 20 38.33393643677284 40.0 37.0 41.0 34.0 41.0 21 38.2788233185464 40.0 37.0 41.0 34.0 41.0 22 38.22497695975314 40.0 37.0 41.0 34.0 41.0 23 38.003541718893246 40.0 36.0 41.0 34.0 41.0 24 37.79399415546747 40.0 36.0 41.0 33.0 41.0 25 37.762193165069895 40.0 36.0 41.0 33.0 41.0 26 37.93046507994754 40.0 36.0 41.0 34.0 41.0 27 37.977739670037025 40.0 36.0 41.0 34.0 41.0 28 37.94261010573687 40.0 36.0 41.0 34.0 41.0 29 37.952200419265886 40.0 36.0 41.0 34.0 41.0 30 37.87080264832651 40.0 36.0 41.0 34.0 41.0 31 37.73900819760478 40.0 36.0 41.0 33.0 41.0 32 37.625134275288865 40.0 36.0 41.0 33.0 41.0 33 37.5665218249571 40.0 36.0 41.0 33.0 41.0 34 37.4466295842825 40.0 36.0 41.0 33.0 41.0 35 37.35923226627622 40.0 35.0 41.0 33.0 41.0 36 37.34749597022752 40.0 35.0 41.0 33.0 41.0 37 37.26196609299177 39.0 35.0 41.0 33.0 41.0 38 37.192155658817846 39.0 35.0 41.0 32.0 41.0 39 37.12246148554792 39.0 35.0 41.0 32.0 41.0 40 37.08173504866609 39.0 35.0 41.0 32.0 41.0 41 37.04582011773839 39.0 35.0 41.0 32.0 41.0 42 37.07692596481412 39.0 35.0 41.0 32.0 41.0 43 37.003872335839 39.0 35.0 41.0 32.0 41.0 44 36.86898728275257 39.0 35.0 41.0 32.0 41.0 45 36.82625958395551 39.0 35.0 41.0 31.0 41.0 46 36.72429816562092 39.0 35.0 41.0 31.0 41.0 47 36.652716569237604 39.0 35.0 41.0 31.0 41.0 48 36.60606748703267 39.0 35.0 41.0 31.0 41.0 49 36.546801069115894 39.0 35.0 41.0 31.0 41.0 50 36.45010469536616 39.0 35.0 40.0 31.0 41.0 51 35.3849216873817 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 11.0 9 16.0 10 28.0 11 15.0 12 21.0 13 21.0 14 28.0 15 47.0 16 74.0 17 176.0 18 370.0 19 649.0 20 1101.0 21 1770.0 22 2685.0 23 3992.0 24 5498.0 25 7489.0 26 9109.0 27 11056.0 28 13440.0 29 16606.0 30 20946.0 31 27403.0 32 37071.0 33 53024.0 34 100555.0 35 137449.0 36 118520.0 37 190769.0 38 357794.0 39 533299.0 40 423.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.396657983430394 21.634700973321756 25.045505244456717 10.923135798791128 2 32.0291524216783 24.244334400269338 25.539856296678447 18.186656881373914 3 31.519602678360574 23.947747989957964 26.561196227818083 17.971453103863375 4 28.903429575562928 26.50669892906753 25.581334796283038 19.008536699086502 5 25.185866065016487 29.694124827879364 24.9298498659972 20.19015924110695 6 25.835776628893985 34.35733757685633 24.743771867041122 15.063113927208564 7 79.82001358799316 6.570799862909017 8.178288518387994 5.430898030709833 8 79.19274967937423 5.224656031216052 8.655684855442887 6.926909433966834 9 73.85152998138615 7.745216650983555 11.207853908485713 7.195399459144586 10 38.97701303938702 26.66534662098582 18.85327995020158 15.504360389425587 11 31.395288284655138 25.570738099303767 23.12816916930373 19.905804446737367 12 28.62991368838929 22.655980351907225 28.98105795000539 19.7330480096981 13 25.05210547286095 24.579190024814437 30.940175287533805 19.42852921479081 14 20.4001554989591 28.711417426298457 29.103192451760805 21.78523462298163 15 19.17560119603405 26.84452162876682 34.67614677454709 19.30373040065203 16 21.397637723756826 26.639006259923047 30.861820282441332 21.10153573387879 17 21.2973626940558 26.173417670930775 28.204410890255758 24.32480874475766 18 21.820355104398658 26.816788558958205 30.007726505911748 21.35512983073139 19 22.76545936984168 28.052363426741707 27.519622055177912 21.662555148238706 20 24.28696339840311 28.32303334386948 27.116826464857112 20.273176792870302 21 22.990775423898153 28.34247071375718 28.473990861408527 20.192763000936143 22 20.98884743057347 26.917366351430072 27.13656659751565 24.95721962048081 23 20.701162245724685 27.577631402070168 27.897833308506787 23.823373043698357 24 22.643264315532093 25.439399609314922 28.487372975879495 23.42996309927349 25 20.580844320594288 26.88569736560058 27.49394777221098 25.039510541594158 26 20.86114209383466 27.866588190556467 27.89686446764011 23.375405247968764 27 23.429660336502653 26.734194875074024 27.382470519989006 22.453674268434316 28 20.58496189427766 28.16668664900954 27.77684930528055 23.47150215143225 29 21.665340565730403 26.460012909804547 26.72250823211974 25.15213829234531 30 25.86793003515681 26.506517271405027 25.454234985085904 22.171317708352255 31 24.42708200874621 27.754626517901155 25.343968783947275 22.474322689405362 32 23.84474809531941 28.6956132096608 25.065245377115254 22.394393317904544 33 26.101178473809206 27.523255208427948 24.99451999384786 21.38104632391499 34 22.96697827011041 25.52429429025746 28.580502804188786 22.928224635443346 35 22.03580109212587 26.140961501897113 27.53585013969474 24.28738726628228 36 24.689819541278073 27.49461385030682 26.241539294368977 21.574027314046134 37 23.86018899663207 28.117517975025702 28.368750522265778 19.653542506076448 38 22.62618849525692 29.04930067855192 26.165848601659867 22.15866222453129 39 24.034762010296358 26.354530360445132 27.864832166485616 21.745875462772897 40 23.287967359751203 24.101006504555368 30.666962163131 21.94406397256243 41 20.4653100472431 25.820275175027156 29.18063916854077 24.53377560918897 42 22.453008190338476 25.897116366265443 28.557492833605213 23.092382609790864 43 23.961856735078943 25.476942192898637 27.203477169870503 23.357723902151918 44 23.118056892757792 25.80283603942698 26.07871347621314 25.000393591602087 45 22.885595637309578 23.774446579931187 26.960358664888844 26.379599117870388 46 23.848139038352777 24.368769899083112 28.560702118976078 23.22238894358803 47 20.434549349726122 25.242967123596237 31.049048779926586 23.273434746751054 48 21.677329971455524 24.004061865333544 29.620311264349443 24.69829689886149 49 22.562608313381265 22.682502370632495 31.08804462481032 23.666844691175918 50 21.35797580077725 22.65071227969467 30.368438071086278 25.622873848441802 51 20.263488384203534 22.734940882541366 28.00125707102451 29.000313662230585 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 823.0 1 1301.5 2 1780.0 3 2523.5 4 3267.0 5 2569.5 6 1872.0 7 2016.0 8 2160.0 9 2335.5 10 2511.0 11 2606.5 12 2702.0 13 2809.0 14 2916.0 15 2953.0 16 2990.0 17 3575.5 18 4161.0 19 4001.5 20 3842.0 21 4118.5 22 4395.0 23 5251.5 24 6108.0 25 7231.0 26 10852.5 27 13351.0 28 14838.5 29 16326.0 30 19953.5 31 23581.0 32 28462.0 33 33343.0 34 37248.5 35 41154.0 36 44321.0 37 47488.0 38 50283.0 39 53078.0 40 61106.5 41 69135.0 42 81126.5 43 93118.0 44 104771.5 45 116425.0 46 134251.5 47 152078.0 48 173549.0 49 195020.0 50 192315.5 51 189611.0 52 161849.5 53 134088.0 54 116809.0 55 99530.0 56 89340.5 57 79151.0 58 72980.5 59 66810.0 60 62804.0 61 58798.0 62 51689.5 63 44581.0 64 36740.5 65 28900.0 66 22638.5 67 16377.0 68 13622.0 69 10867.0 70 9287.0 71 7707.0 72 6401.5 73 5096.0 74 4407.5 75 2954.0 76 2189.0 77 1616.5 78 1044.0 79 826.0 80 608.0 81 431.0 82 254.0 83 174.0 84 94.0 85 57.5 86 21.0 87 22.0 88 23.0 89 14.5 90 6.0 91 5.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1651458.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.51335830432671 #Duplication Level Percentage of deduplicated Percentage of total 1 65.32706626947937 14.054045836258055 2 13.002163707404849 5.59440413137827 3 6.007084512926094 3.87697684472853 4 3.3724341480600972 2.9020953673985472 5 2.152066408037403 2.3149087865407014 6 1.4868814346024801 1.919268783519269 7 1.03672633287246 1.5612425543831143 8 0.7951366910973136 1.3684848429194603 9 0.6036841818129987 1.1688546695397615 >10 4.152946346933235 18.996279322891688 >50 1.2970830708428562 20.19551399190937 >100 0.7544797724381216 22.558634789109906 >500 0.008259687937090525 1.1733906687204834 >1k 0.0031329850795860613 1.0555614125351314 >5k 8.54450476250744E-4 1.2603379981677088 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTGC 8307 0.5030100674676559 TruSeq Adapter, Index 22 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTGC 7102 0.43004423969607464 TruSeq Adapter, Index 22 (95% over 22bp) CTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTGCT 5160 0.3124511795032026 Illumina Paired End PCR Primer 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTGC 3093 0.1872890500394197 TruSeq Adapter, Index 22 (95% over 22bp) ACTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTGC 2364 0.14314623805146723 No Hit GCCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTG 1658 0.10039613480936238 TruSeq Adapter, Index 22 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.81657662501862E-4 0.0 0.0 0.3258332939741731 0.0 2 1.81657662501862E-4 0.0 0.0 1.65496185794613 0.0 3 1.81657662501862E-4 0.0 0.0 2.3168012749945803 0.0 4 1.81657662501862E-4 0.0 0.0 3.134624071577963 0.0 5 1.81657662501862E-4 0.0 0.0 5.2585654615497335 0.0 6 1.81657662501862E-4 0.0 0.0 6.411607198003219 0.0 7 1.81657662501862E-4 0.0 0.0 7.5398829398022835 0.0 8 1.81657662501862E-4 0.0 0.0 9.30117508286617 0.0 9 1.81657662501862E-4 0.0 0.0 9.928257333822598 0.0 10 1.81657662501862E-4 0.0 0.0 11.446733734675663 0.0 11 1.81657662501862E-4 0.0 0.0 13.634860832064758 0.0 12 1.81657662501862E-4 0.0 0.0 15.252340658981337 0.0 13 1.81657662501862E-4 0.0 0.0 15.898618069608794 0.0 14 2.422102166691493E-4 0.0 0.0 16.156148082482268 0.0 15 2.422102166691493E-4 0.0 0.0 16.63372607719966 0.0 16 2.422102166691493E-4 0.0 0.0 17.662271762285204 0.0 17 2.422102166691493E-4 0.0 0.0 18.843530988980646 0.0 18 2.422102166691493E-4 0.0 0.0 20.186465535302744 0.0 19 2.422102166691493E-4 0.0 0.0 20.973345976706643 0.0 20 2.422102166691493E-4 0.0 0.0 21.746299330652068 0.0 21 2.422102166691493E-4 0.0 0.0 22.683895079378342 0.0 22 2.422102166691493E-4 0.0 0.0 23.666965796284252 0.0 23 2.422102166691493E-4 0.0 0.0 24.62841925135244 0.0 24 2.422102166691493E-4 0.0 0.0 25.34384767883894 0.0 25 2.422102166691493E-4 0.0 0.0 26.008109198054083 0.0 26 2.422102166691493E-4 0.0 0.0 26.58941371806004 0.0 27 2.422102166691493E-4 0.0 0.0 27.17538078473688 0.0 28 2.422102166691493E-4 0.0 0.0 27.777939251255557 0.0 29 3.0276277083643666E-4 0.0 0.0 28.387582366611806 0.0 30 3.0276277083643666E-4 0.0 0.0 29.07836590455222 0.0 31 3.63315325003724E-4 0.0 0.0 29.723190053879662 0.0 32 4.238678791710113E-4 0.0 0.0 30.394536221932377 0.0 33 4.238678791710113E-4 0.0 0.0 31.028703121726377 0.0 34 4.238678791710113E-4 0.0 0.0 31.604981779736452 0.0 35 4.238678791710113E-4 0.0 0.0 32.227401484021996 0.0 36 4.238678791710113E-4 0.0 0.0 32.831110449069854 0.0 37 4.238678791710113E-4 0.0 0.0 33.43179178640934 0.0 38 4.238678791710113E-4 0.0 0.0 34.0095842582736 0.0 39 4.238678791710113E-4 0.0 0.0 34.6306112538133 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTCGC 20 7.0341816E-4 45.000004 20 CGTTGTC 20 7.0341816E-4 45.000004 22 CGGCATA 60 0.0 45.000004 23 CGTTCGC 20 7.0341816E-4 45.000004 28 TAACACG 20 7.0341816E-4 45.000004 1 GTCGTTA 40 6.8175723E-9 45.000004 31 TTACGCG 20 7.0341816E-4 45.000004 1 CGTCGAA 20 7.0341816E-4 45.000004 42 CACGTAA 20 7.0341816E-4 45.000004 29 GCTCGTC 30 2.1660799E-6 45.000004 9 ATCGCCT 20 7.0341816E-4 45.000004 31 ATCGCCC 20 7.0341816E-4 45.000004 16 TAGTCGT 20 7.0341816E-4 45.000004 15 CCGCAAT 20 7.0341816E-4 45.000004 26 CTTACGA 20 7.0341816E-4 45.000004 29 TATCCCG 20 7.0341816E-4 45.000004 10 CTGTCGT 35 1.2123564E-7 45.0 37 GATCGCG 25 3.8915496E-5 45.0 1 CCTACGG 25 3.8915496E-5 45.0 2 TTACTCG 25 3.8915496E-5 45.0 35 >>END_MODULE