##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935005.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 582059 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08946515731223 33.0 31.0 34.0 30.0 34.0 2 32.29373139149124 34.0 31.0 34.0 30.0 34.0 3 32.26592493200861 34.0 31.0 34.0 30.0 34.0 4 35.869303627295515 37.0 35.0 37.0 35.0 37.0 5 35.76946151506978 37.0 35.0 37.0 35.0 37.0 6 35.72114682532183 37.0 35.0 37.0 35.0 37.0 7 36.002374329750076 37.0 35.0 37.0 35.0 37.0 8 35.68498726074161 37.0 35.0 37.0 35.0 37.0 9 37.37757856162348 39.0 37.0 39.0 34.0 39.0 10 37.37106891225804 39.0 37.0 39.0 34.0 39.0 11 37.29300294300062 39.0 37.0 39.0 34.0 39.0 12 37.06599159191766 39.0 35.0 39.0 34.0 39.0 13 36.862828338707935 39.0 35.0 39.0 33.0 39.0 14 37.84411717712466 40.0 36.0 41.0 33.0 41.0 15 37.98002092571372 40.0 36.0 41.0 33.0 41.0 16 38.07127799759131 40.0 36.0 41.0 34.0 41.0 17 38.10729668298231 40.0 36.0 41.0 34.0 41.0 18 38.107042413226154 40.0 36.0 41.0 34.0 41.0 19 38.0450297993846 40.0 36.0 41.0 34.0 41.0 20 38.00738928527864 40.0 36.0 41.0 34.0 41.0 21 37.931223467036844 40.0 36.0 41.0 34.0 41.0 22 37.84440408961978 39.0 35.0 41.0 34.0 41.0 23 37.63079172386305 39.0 35.0 41.0 33.0 41.0 24 37.42473013904089 39.0 35.0 41.0 33.0 41.0 25 37.379696903578505 39.0 35.0 41.0 33.0 41.0 26 37.56655253161621 39.0 35.0 41.0 33.0 41.0 27 37.65321213141623 39.0 35.0 41.0 33.0 41.0 28 37.67674239209427 39.0 35.0 41.0 33.0 41.0 29 37.70781140743464 39.0 36.0 41.0 34.0 41.0 30 37.49726745914074 39.0 36.0 41.0 33.0 41.0 31 37.35069812510416 39.0 35.0 41.0 33.0 41.0 32 37.26870128285964 39.0 35.0 41.0 33.0 41.0 33 37.07272974045586 39.0 35.0 41.0 33.0 41.0 34 36.99851217831869 39.0 35.0 41.0 33.0 41.0 35 36.9537005698735 39.0 35.0 41.0 32.0 41.0 36 36.816376003119956 39.0 35.0 41.0 32.0 41.0 37 36.773184505350834 39.0 35.0 41.0 32.0 41.0 38 36.697687004238404 39.0 35.0 41.0 32.0 41.0 39 36.5805476764383 39.0 35.0 40.0 31.0 41.0 40 36.52725410997854 39.0 35.0 40.0 31.0 41.0 41 36.56895950410525 39.0 35.0 40.0 31.0 41.0 42 36.62701032025963 39.0 35.0 41.0 32.0 41.0 43 36.57289037709236 39.0 35.0 41.0 31.0 41.0 44 36.376367344203935 39.0 35.0 40.0 31.0 41.0 45 36.406838482009555 39.0 35.0 40.0 31.0 41.0 46 36.26911189415506 39.0 35.0 40.0 31.0 41.0 47 36.22219053394931 38.0 35.0 40.0 31.0 41.0 48 36.23818032192613 39.0 35.0 40.0 31.0 41.0 49 36.22995263366772 39.0 35.0 40.0 31.0 41.0 50 36.16686109140139 39.0 35.0 40.0 31.0 41.0 51 35.15736205436219 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 4.0 10 9.0 11 11.0 12 8.0 13 17.0 14 18.0 15 16.0 16 37.0 17 84.0 18 180.0 19 317.0 20 570.0 21 917.0 22 1554.0 23 2293.0 24 3164.0 25 3738.0 26 4028.0 27 4379.0 28 4881.0 29 5848.0 30 7343.0 31 9591.0 32 13653.0 33 19665.0 34 39590.0 35 61224.0 36 42991.0 37 67782.0 38 131829.0 39 156231.0 40 82.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.2163303032854 25.504974581614583 25.418729029187766 11.859966085912253 2 32.249479863725156 24.916374456884956 23.910462685054267 18.923682994335625 3 28.985205967092682 24.87651595456818 29.199101809266757 16.93917626907238 4 28.85085532566286 28.084094567732826 25.770239786688293 17.294810319916024 5 23.33646589091484 29.095504064021 25.843771851307167 21.72425819375699 6 22.623995162002476 31.2222644096217 27.581911799319315 18.571828629056505 7 72.33854299993642 7.823605510781554 12.386201398827266 7.451650090454748 8 69.34434481727797 6.896208116359339 12.30923325642246 11.45021380994023 9 62.519950726644545 9.42567677847091 17.530525256030746 10.523847238853794 10 37.57643125525076 23.70859311513094 23.44848202673612 15.26649360288218 11 29.62517545472194 24.06577340097825 25.669562707560573 20.63948843673923 12 26.394059708723688 21.697972198694636 32.83137963677222 19.076588455809464 13 21.321206269467528 29.370905698563206 32.7741689416365 16.533719090332767 14 14.598691885186895 34.21508816116579 30.020152596214473 21.166067357432837 15 11.982977670648507 27.427975514509694 41.249254800630176 19.339792014211618 16 13.117570555562235 27.17198771945799 36.2353300954027 23.475111629577068 17 13.709091346409899 26.981800814006828 28.150239065111954 31.158868774471316 18 15.228696747236963 26.405055157638657 35.3601610833266 23.006087011797774 19 18.385593213059156 27.891674211720808 29.91432140040786 23.808411174812175 20 20.80785624824975 28.73746475872721 28.897585983551494 21.557093009471547 21 18.237154652707027 29.64854078366626 31.81498782769444 20.29931673593227 22 15.17767099211592 29.53927351007372 26.256960205065123 29.026095292745236 23 15.502723950664796 29.009945727151372 27.99303850640571 27.494291815778126 24 20.38762393503064 24.864317878428132 30.148146493740324 24.5999116928009 25 15.641541493216323 28.481476963675505 28.166904042373712 27.71007750073446 26 14.820490706268608 30.253118670100456 32.18024289633869 22.74614772729225 27 18.85100994916323 29.37794965802436 31.368297715523685 20.402742677288728 28 18.44606818209151 25.634858321922692 31.960677525817832 23.958395970167974 29 19.61433462930734 22.97825478173175 33.63043952588999 23.776971063070924 30 20.920215991849624 25.053130352764924 33.345588677436474 20.68106497794897 31 23.405874662190605 30.43265373441524 24.739416450909616 21.422055152484543 32 23.933140798441396 26.807763474149525 25.904246820339523 23.35484890706956 33 22.156173171448255 28.17961753018165 27.814706069315996 21.849503229054097 34 19.972202130711835 26.242185070585627 30.31118838468265 23.474424414019886 35 18.69380939045698 22.72879553447331 30.245559298971408 28.331835776098302 36 21.82923037011712 26.490441690618994 32.58174858562448 19.09857935363941 37 22.336051843541636 27.231603669043857 31.727883255821144 18.70446123159336 38 22.84184249363037 26.970977168981154 25.837586911292497 24.349593426095982 39 22.166309600916744 25.88002247194872 30.91988956445996 21.033778362674575 40 22.083156518497265 23.998941688041935 32.197766893046925 21.720134900413875 41 16.092870310398087 25.826247854598932 27.695989581812153 30.384892253190827 42 21.37858876849254 23.927299466205316 29.53978892174161 25.154322843560532 43 25.424913969202436 22.06941220735355 30.553260064701345 21.95241375874267 44 22.137446547514944 22.310968475704353 29.899889873706957 25.651695103073745 45 22.74717855062803 21.078275570002354 27.831199242688452 28.34334663668116 46 23.411715994426682 21.57925571119079 32.28916656215263 22.719861732229894 47 18.155032393623326 23.99292855191656 34.414380672749665 23.437658381710445 48 18.24866551328989 19.477063321759477 33.31260233069156 28.96166883425907 49 21.333404345607576 18.308796874543646 36.61621931797292 23.741579461875858 50 20.913343836277765 18.448473436541658 33.53594738677694 27.102235340403634 51 16.99501253309372 18.996527843397317 28.416706897410744 35.591752726098214 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1774.0 1 1648.0 2 1522.0 3 1720.5 4 1919.0 5 1569.5 6 1220.0 7 1318.0 8 1416.0 9 1653.0 10 1890.0 11 1967.5 12 2045.0 13 2036.5 14 2028.0 15 2101.0 16 2174.0 17 2211.0 18 2248.0 19 2079.0 20 1910.0 21 1799.0 22 1688.0 23 1911.0 24 2134.0 25 2051.0 26 2712.0 27 3456.0 28 3478.0 29 3500.0 30 4421.0 31 5342.0 32 6308.5 33 7275.0 34 8680.0 35 10085.0 36 10119.0 37 10153.0 38 12525.5 39 14898.0 40 21956.0 41 29014.0 42 38742.0 43 48470.0 44 63006.5 45 77543.0 46 89403.5 47 101264.0 48 96712.0 49 92160.0 50 70285.5 51 48411.0 52 39187.0 53 29963.0 54 25181.0 55 20399.0 56 16889.0 57 13379.0 58 11756.0 59 10133.0 60 10525.5 61 10918.0 62 9419.5 63 7921.0 64 6186.0 65 4451.0 66 3757.0 67 3063.0 68 2480.5 69 1898.0 70 1489.5 71 1081.0 72 786.5 73 492.0 74 481.5 75 297.0 76 123.0 77 100.5 78 78.0 79 95.0 80 112.0 81 86.0 82 60.0 83 32.5 84 5.0 85 2.5 86 0.0 87 2.0 88 4.0 89 2.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 582059.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.403677668682015 #Duplication Level Percentage of deduplicated Percentage of total 1 64.57998127840399 15.11409065689286 2 12.309186951683863 5.761604875615111 3 6.15455261866074 4.321174970462362 4 3.739453561245799 3.5006786321760694 5 2.554675215014713 2.9894397640187633 6 1.6998964618145735 2.3870297317464777 7 1.2528340174931905 2.0524646462439384 8 0.9381177072862127 1.7564323549287604 9 0.754012955692312 1.588200855572977 >10 4.622445957748562 21.429319972855367 >50 0.9872448166311674 16.659735888130523 >100 0.3861847712027678 13.829051429684439 >500 0.00959923905475331 1.5283622314100842 >1k 0.00959923905475331 3.663299703915758 >5k 0.0022152090126353794 3.419114286346508 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 7667 1.3172204192358508 No Hit GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 6968 1.197129500617635 No Hit CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT 5150 0.8847900298766963 No Hit TCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 2841 0.48809484949120274 No Hit ACTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 2690 0.4621524622074395 No Hit AGTACCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTT 2017 0.34652844471093136 No Hit AGTACTGAATCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCC 1907 0.32763001688832233 No Hit AGTACTGAATGATACCTGTCTCTTATACACATCTGACGCTTGGTACATCGT 1673 0.28742790679295394 No Hit CGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG 1547 0.2657806167416018 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1409 0.24207168001869225 No Hit AAAACTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC 1377 0.23657395556120597 No Hit AGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG 1341 0.23038901554653393 No Hit GCCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG 1195 0.20530564770925283 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCC 1141 0.19602823768724476 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC 1045 0.17953506431478597 No Hit AGACATAGACCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCC 1015 0.1743809476358926 No Hit ACCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG 964 0.16561894928177384 No Hit GGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG 936 0.16080844038147335 No Hit AGTACTGAATGATACGGCTGTCTCTTATACACATCTGACGCTTGGTACATC 724 0.12438601585062684 No Hit AGCCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCT 716 0.12301158473625527 No Hit AAAAACTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTT 690 0.11854468361454766 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 690 0.11854468361454766 No Hit GGCCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCT 689 0.11837287972525122 No Hit GAAACTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC 660 0.11339056693565427 No Hit TGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG 612 0.1051439802494249 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.914340298835685 0.0 2 0.0 0.0 0.0 4.496451390666582 0.0 3 0.0 0.0 0.0 6.062615645492983 0.0 4 0.0 0.0 0.0 7.7651921884207615 0.0 5 0.0 0.0 0.0 12.107879098167023 0.0 6 0.0 0.0 0.0 14.73046546827727 0.0 7 0.0 0.0 0.0 17.12146019561591 0.0 8 0.0 0.0 0.0 20.64034745618571 0.0 9 0.0 0.0 0.0 21.906542120300518 0.0 10 0.0 0.0 0.0 24.43463635129772 0.0 11 0.0 0.0 0.0 28.794160042195035 0.0 12 0.0 0.0 0.0 31.879242482291314 0.0 13 0.0 0.0 0.0 33.051975830628855 0.0 14 0.0 0.0 0.0 33.50674072559654 0.0 15 0.0 0.0 0.0 34.27710936520181 0.0 16 0.0 0.0 0.0 36.32466811783685 0.0 17 0.0 0.0 0.0 38.307972215875026 0.0 18 0.0 0.0 0.0 40.94017960378587 0.0 19 0.0 0.0 0.0 42.106899815998034 0.0 20 0.0 0.0 0.0 43.16847604796077 0.0 21 0.0 0.0 0.0 44.496691916111594 0.0 22 0.0 0.0 0.0 45.61616605876724 0.0 23 0.0 0.0 0.0 46.796286974344525 0.0 24 0.0 0.0 0.0 47.63778242411852 0.0 25 0.0 0.0 0.0 48.404886789827145 0.0 26 0.0 0.0 0.0 49.08608921088756 0.0 27 0.0 0.0 0.0 49.728292149077674 0.0 28 0.0 0.0 0.0 50.343006464980355 0.0 29 0.0 0.0 0.0 50.951879448646956 0.0 30 0.0 0.0 0.0 51.735305183838754 0.0 31 0.0 0.0 0.0 52.468048771688096 0.0 32 0.0 0.0 0.0 53.065754502550426 0.0 33 0.0 0.0 0.0 53.59559769714067 0.0 34 0.0 0.0 0.0 54.14708818178226 0.0 35 0.0 0.0 0.0 54.80801774390569 0.0 36 0.0 0.0 0.0 55.40005394642124 0.0 37 0.0 0.0 0.0 55.943469648265896 0.0 38 0.0 0.0 0.0 56.44444978945433 0.0 39 0.0 0.0 0.0 56.999719959660446 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGT 25 3.8884238E-5 45.000004 9 TGATCGC 35 1.2105374E-7 45.000004 14 GTTTGCG 35 1.2105374E-7 45.000004 1 TATCACT 25 3.8884238E-5 45.000004 8 TCTGACA 25 3.8884238E-5 45.000004 44 CTGTCCA 35 1.2105374E-7 45.000004 11 TCTTGCG 25 3.8884238E-5 45.000004 1 ACTGCGT 25 3.8884238E-5 45.000004 26 GATCGTC 25 3.8884238E-5 45.000004 28 CACGGTG 25 3.8884238E-5 45.000004 10 ATAGGCG 25 3.8884238E-5 45.000004 4 CCTAGTA 35 1.2105374E-7 45.000004 27 TTAGCTA 25 3.8884238E-5 45.000004 42 CGAAACG 25 3.8884238E-5 45.000004 40 CCCTATT 25 3.8884238E-5 45.000004 34 CGTGCGG 25 3.8884238E-5 45.000004 2 TTAGCCG 25 3.8884238E-5 45.000004 1 TAGACCG 25 3.8884238E-5 45.000004 1 GACGTTG 25 3.8884238E-5 45.000004 36 CATTGCC 25 3.8884238E-5 45.000004 34 >>END_MODULE