##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935004.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 601454 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.98070675396622 33.0 31.0 34.0 30.0 34.0 2 32.150791249206094 33.0 31.0 34.0 30.0 34.0 3 32.174483834175184 34.0 31.0 34.0 30.0 34.0 4 35.782851223867496 37.0 35.0 37.0 35.0 37.0 5 35.674716603431015 37.0 35.0 37.0 33.0 37.0 6 35.592161661573456 37.0 35.0 37.0 33.0 37.0 7 35.89934558586359 37.0 35.0 37.0 35.0 37.0 8 35.557469066628535 37.0 35.0 37.0 35.0 37.0 9 37.32737333195889 39.0 37.0 39.0 34.0 39.0 10 37.25293538657986 39.0 37.0 39.0 34.0 39.0 11 37.14447655182275 39.0 37.0 39.0 34.0 39.0 12 36.95188326954347 39.0 35.0 39.0 33.0 39.0 13 36.698570464241655 39.0 35.0 39.0 33.0 39.0 14 37.686178826643435 39.0 36.0 41.0 33.0 41.0 15 37.78283293485453 39.0 36.0 41.0 33.0 41.0 16 37.9283868758043 40.0 36.0 41.0 33.0 41.0 17 37.94644977005723 39.0 36.0 41.0 34.0 41.0 18 37.979245295567075 39.0 36.0 41.0 34.0 41.0 19 37.932197641049854 39.0 36.0 41.0 34.0 41.0 20 37.85710627911694 39.0 36.0 41.0 34.0 41.0 21 37.79308642057414 39.0 35.0 41.0 34.0 41.0 22 37.67682981574651 39.0 35.0 41.0 33.0 41.0 23 37.44285681032964 39.0 35.0 41.0 33.0 41.0 24 37.2080757630675 39.0 35.0 41.0 32.0 41.0 25 37.188307002696796 39.0 35.0 41.0 32.0 41.0 26 37.40017856727198 39.0 35.0 41.0 33.0 41.0 27 37.372079992817405 39.0 35.0 41.0 33.0 41.0 28 37.40155190588141 39.0 35.0 41.0 33.0 41.0 29 37.43607823707216 39.0 35.0 41.0 33.0 41.0 30 37.30027400266687 39.0 35.0 41.0 33.0 41.0 31 37.16255274717601 39.0 35.0 41.0 33.0 41.0 32 36.95435228629288 39.0 35.0 41.0 32.0 41.0 33 36.850838135584766 39.0 35.0 41.0 32.0 41.0 34 36.79298333704656 39.0 35.0 41.0 32.0 41.0 35 36.61518586625078 39.0 35.0 40.0 31.0 41.0 36 36.55293172877726 39.0 35.0 40.0 31.0 41.0 37 36.392623542282536 39.0 35.0 40.0 31.0 41.0 38 36.350118213529214 38.0 35.0 40.0 31.0 41.0 39 36.34984387833484 39.0 35.0 40.0 31.0 41.0 40 36.261128864385306 38.0 35.0 40.0 31.0 41.0 41 36.172972496649784 38.0 35.0 40.0 30.0 41.0 42 36.186428222274685 38.0 35.0 40.0 31.0 41.0 43 36.061125206582716 38.0 35.0 40.0 30.0 41.0 44 35.93276460045157 38.0 35.0 40.0 30.0 41.0 45 35.96018149351405 38.0 35.0 40.0 30.0 41.0 46 35.81707994293828 38.0 35.0 40.0 29.0 41.0 47 35.684750620995125 38.0 35.0 40.0 29.0 41.0 48 35.677350221297054 38.0 35.0 40.0 29.0 41.0 49 35.68306969444047 38.0 35.0 40.0 29.0 41.0 50 35.58393659365471 38.0 35.0 40.0 29.0 41.0 51 34.50644272047405 36.0 33.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 3.0 10 11.0 11 9.0 12 9.0 13 8.0 14 14.0 15 26.0 16 50.0 17 86.0 18 187.0 19 392.0 20 718.0 21 1169.0 22 1800.0 23 2596.0 24 3456.0 25 4099.0 26 4431.0 27 5012.0 28 5892.0 29 7347.0 30 9162.0 31 11781.0 32 16010.0 33 23296.0 34 43272.0 35 64211.0 36 48845.0 37 76823.0 38 135259.0 39 135398.0 40 79.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.92789473509196 22.251909539216634 22.993612146564825 12.826583579126583 2 27.602775939639606 27.791319036867325 24.975143568751726 19.630761454741343 3 26.97363389386387 28.43459350174743 26.93472817538831 17.65704442900039 4 26.866560036178992 25.726156946333383 28.716244301309825 18.691038716177797 5 24.99243499918531 30.160078742513974 24.55898539206656 20.28850086623416 6 23.21474293960968 33.50114888254131 26.439927242981177 16.844180934867836 7 70.58245518360506 8.388671452845935 13.649090371000941 7.379782992548059 8 67.63509761345007 7.581128398846794 13.187209661919283 11.59656432578385 9 62.6383730094072 8.255327922002348 16.753733452599867 12.352565615990581 10 37.63912119630096 23.26379074708955 22.199536456653377 16.897551599956106 11 28.724058697755773 23.04282621779887 26.1802232589691 22.052891825476262 12 25.006234890781343 20.445786377678093 32.881151343244866 21.666827388295697 13 20.311944055572 29.42336404779085 34.01440509166121 16.250286804975943 14 15.688149052130337 33.15748170267385 28.115699621251167 23.038669623944642 15 12.421066282708237 26.33468228659216 41.20032454684814 20.04392688385147 16 12.808627093676325 27.263764144888885 34.01706531172791 25.910543449706875 17 13.168089330189838 26.71609133865599 28.536679446807238 31.579139884346937 18 14.937634465811184 26.275159862599633 34.870497161877715 23.916708509711466 19 16.80078609502971 27.973876638944954 29.391940198252904 25.833397067772427 20 19.497417923897757 28.565276812524313 31.040279057084994 20.89702620649293 21 18.758541800370434 30.160245006268145 31.30729864628051 19.773914547080906 22 14.976706448040913 28.69828781585957 26.649253309480024 29.67575242661949 23 14.051614919844244 29.63601538937309 27.95475630721552 28.357613383567156 24 19.399488572692174 24.4647138434527 29.439990423207764 26.695807160647366 25 14.270085492822393 30.195825449660322 27.06757291496939 28.466516142547892 26 18.001376663884518 28.792559364473426 28.40483228975117 24.801231681890883 27 20.31809581447625 31.676570444290004 25.786843216605092 22.21849052462865 28 14.287543187010145 28.20764347730666 29.91749992518131 27.587313410501885 29 19.60648694663266 26.50144483202373 26.202502602027756 27.689565619315857 30 19.57423177832386 31.451948112407603 22.862596308279603 26.111223800988938 31 19.739165422459575 34.00592564019858 18.34404626122696 27.910862676114885 32 20.713969813152794 37.49098019133633 17.673837068171462 24.121212927339414 33 17.19699262121459 35.04025245488433 19.089074143658536 28.673680780242545 34 18.03329930468498 31.066881257752048 23.48109747378852 27.418721963774452 35 17.613317061653923 33.73707714970721 20.000864571521678 28.648741217117184 36 21.226727231010184 32.95015080122503 21.026711934744803 24.79641003301998 37 15.699454987413834 35.24858093885817 26.864398607374795 22.187565466353202 38 14.543755632184672 35.91247210925524 20.506306384195632 29.037465874364454 39 18.703175970232138 32.18400742201399 25.10582687952861 24.006989728225268 40 20.321753617067973 28.943360589504767 25.755585630821308 24.979300162605952 41 17.213618996631496 33.15299258131129 21.473296378442907 28.16009204361431 42 20.935433133705985 28.503094168465086 26.39802877693057 24.163443920898356 43 22.723101018531757 27.460287902316722 26.16276556478135 23.653845514370175 44 18.51446660925025 25.722332879987498 25.903892899540114 29.859307611222135 45 19.28726053862806 24.94920642310135 24.373767569922222 31.38976546834837 46 24.197195462994674 26.335347341608834 26.321713713766968 23.14574348162952 47 15.650407179933959 26.89382729186272 32.28160424571123 25.174161282492097 48 17.641249372354327 25.22038260615109 27.708852214799467 29.42951580669511 49 20.16912349074077 21.074762159699663 33.95455014016034 24.801564209399224 50 20.618035626997244 20.65760640048948 30.28810183322415 28.436256139289124 51 17.443894296155648 20.351681092818403 24.86757091980434 37.336853691221606 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1384.0 1 1363.5 2 1343.0 3 1460.5 4 1578.0 5 1297.5 6 1017.0 7 1154.5 8 1292.0 9 1449.5 10 1607.0 11 1794.5 12 1982.0 13 2039.5 14 2097.0 15 2158.0 16 2219.0 17 2212.0 18 2205.0 19 2140.0 20 2075.0 21 1965.0 22 1855.0 23 1759.5 24 1664.0 25 1500.5 26 2240.0 27 3143.0 28 2597.5 29 2052.0 30 3440.5 31 4829.0 32 5635.0 33 6441.0 34 7427.0 35 8413.0 36 8752.5 37 9092.0 38 11340.0 39 13588.0 40 18798.0 41 24008.0 42 34720.0 43 45432.0 44 66447.0 45 87462.0 46 96771.0 47 106080.0 48 103987.5 49 101895.0 50 78707.5 51 55520.0 52 44780.5 53 34041.0 54 28660.5 55 23280.0 56 19340.0 57 15400.0 58 12988.5 59 10577.0 60 9529.0 61 8481.0 62 6875.0 63 5269.0 64 4666.0 65 4063.0 66 3632.5 67 3202.0 68 2570.0 69 1938.0 70 1677.0 71 1416.0 72 1235.5 73 1055.0 74 775.0 75 358.5 76 222.0 77 245.0 78 268.0 79 151.0 80 34.0 81 63.5 82 93.0 83 50.0 84 7.0 85 4.5 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 601454.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.469749709464935 #Duplication Level Percentage of deduplicated Percentage of total 1 65.47302209265192 15.366354412368086 2 11.943024504542509 5.605995917912383 3 5.96900584694177 4.202732197261684 4 3.6435703413691045 3.4205473584305044 5 2.401376660350204 2.817985458828504 6 1.6368849167995791 2.3050367580290674 7 1.2274924352342584 2.016625815764675 8 0.9363157426899202 1.758007690397136 9 0.7767423735607354 1.6406954186585558 >10 4.622204327944767 20.976901195879183 >50 0.9464053984351847 15.96526221567974 >100 0.39897482483051905 13.93486694014171 >500 0.012847132105454996 1.988685150663105 >1k 0.00999221385979833 4.370015010992174 >5k 0.002141188684242499 3.6302884589934985 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 8718 1.4494874088458967 No Hit GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 7775 1.2927006886644699 No Hit CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT 5179 0.8610799828415805 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGC 3985 0.6625610603637186 No Hit GAATCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTC 3878 0.6447708386676289 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCG 3528 0.5865785247084565 No Hit TCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 2402 0.3993655375140908 No Hit ACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 1904 0.31656618793789715 No Hit CGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG 1510 0.2510582687952861 No Hit GCCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG 1274 0.2118200228113871 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1193 0.1983526587236929 No Hit CGTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTC 1136 0.1888756247360563 No Hit ACCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG 1121 0.18638166842352033 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCC 1111 0.1847190308818297 No Hit GGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG 1031 0.17141793054830462 No Hit AGACATAGACCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCC 1009 0.1677601279565852 No Hit AAAACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTC 1006 0.16726133669407803 No Hit AGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG 961 0.15977946775647017 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCT 909 0.15113375253967887 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACACAAAT 903 0.15013617001466445 No Hit GGCCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT 773 0.12852188197268619 No Hit AGGTACAGGAGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGC 722 0.12004243051006394 No Hit GACCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT 660 0.109734077751582 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTC 658 0.10940155024324388 No Hit GAAACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTC 657 0.1092352864890748 No Hit GAACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT 645 0.10724012143904604 No Hit AGCCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT 603 0.10025704376394537 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.9046410864338752 0.0 2 0.0 0.0 0.0 4.554629281707329 0.0 3 0.0 0.0 0.0 6.034044166303658 0.0 4 0.0 0.0 0.0 7.725279073711373 0.0 5 0.0 0.0 0.0 12.499043983413529 0.0 6 0.0 0.0 0.0 14.590974538368686 0.0 7 0.0 0.0 0.0 17.09041755479222 0.0 8 0.0 0.0 0.0 20.981820721119156 0.0 9 0.0 0.0 0.0 22.349672626668042 0.0 10 0.0 0.0 0.0 25.806296075842873 0.0 11 0.0 0.0 0.0 30.03272070682047 0.0 12 0.0 0.0 0.0 33.99046311106086 0.0 13 1.6626375416906364E-4 0.0 0.0 35.208345110349256 0.0 14 1.6626375416906364E-4 0.0 0.0 35.67587878707266 0.0 15 1.6626375416906364E-4 0.0 0.0 36.619259328227926 0.0 16 1.6626375416906364E-4 0.0 0.0 38.299853355368825 0.0 17 1.6626375416906364E-4 0.0 0.0 40.31812906722708 0.0 18 1.6626375416906364E-4 0.0 0.0 42.92630857887719 0.0 19 1.6626375416906364E-4 0.0 0.0 44.30214114462619 0.0 20 1.6626375416906364E-4 0.0 0.0 45.364234006258165 0.0 21 1.6626375416906364E-4 0.0 0.0 46.634156560601475 0.0 22 3.325275083381273E-4 0.0 0.0 47.770403056592855 0.0 23 3.325275083381273E-4 0.0 0.0 48.957027470097465 0.0 24 3.325275083381273E-4 0.0 0.0 49.89874537371104 0.0 25 3.325275083381273E-4 0.0 0.0 50.64327446488011 0.0 26 3.325275083381273E-4 0.0 0.0 51.357876080298745 0.0 27 3.325275083381273E-4 0.0 0.0 51.98219647720358 0.0 28 3.325275083381273E-4 0.0 0.0 52.58373873978725 0.0 29 3.325275083381273E-4 0.0 0.0 53.25627562540111 0.0 30 3.325275083381273E-4 0.0 0.0 54.09557505644654 0.0 31 6.650550166762546E-4 0.0 0.0 54.84642217027404 0.0 32 6.650550166762546E-4 0.0 0.0 55.42635014481573 0.0 33 6.650550166762546E-4 0.0 0.0 56.03437669381199 0.0 34 6.650550166762546E-4 0.0 0.0 56.58321334632407 0.0 35 6.650550166762546E-4 0.0 0.0 57.203210885620514 0.0 36 6.650550166762546E-4 0.0 0.0 57.815726555979346 0.0 37 6.650550166762546E-4 0.0 0.0 58.34178507417026 0.0 38 6.650550166762546E-4 0.0 0.0 58.86667974608199 0.0 39 6.650550166762546E-4 0.0 0.0 59.337372434134615 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGC 30 2.1637698E-6 45.000004 19 TCCGGAC 25 3.8885795E-5 45.000004 32 ATCCTTA 25 3.8885795E-5 45.000004 29 ACAACGA 25 3.8885795E-5 45.000004 13 TTGATCG 25 3.8885795E-5 45.000004 1 CTTCGCT 30 2.1637698E-6 45.000004 24 AGGTATC 25 3.8885795E-5 45.000004 19 CGTGGCA 25 3.8885795E-5 45.000004 10 TCGTTCT 45 3.8380676E-10 45.000004 29 CTCACGA 30 2.1637698E-6 45.000004 24 GCCTTCG 30 2.1637698E-6 45.000004 22 TCGCAAC 25 3.8885795E-5 45.000004 33 CGAACCT 30 2.1637698E-6 45.000004 36 GTTCTAT 25 3.8885795E-5 45.000004 40 GCGACGA 25 3.8885795E-5 45.000004 21 CGTATAA 25 3.8885795E-5 45.000004 28 CTACTAC 30 2.1637698E-6 45.000004 35 GATCGAA 25 3.8885795E-5 45.000004 9 CGAAAAG 25 3.8885795E-5 45.000004 2 CGCGGAT 30 2.1637698E-6 45.000004 3 >>END_MODULE