##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934999.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1283443 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0900110094488 33.0 31.0 34.0 30.0 34.0 2 32.267226514928986 34.0 31.0 34.0 30.0 34.0 3 32.27773886335427 34.0 31.0 34.0 30.0 34.0 4 35.864840900608755 37.0 35.0 37.0 35.0 37.0 5 35.765803389788246 37.0 35.0 37.0 35.0 37.0 6 35.69378850482647 37.0 35.0 37.0 33.0 37.0 7 36.00322803583798 37.0 35.0 37.0 35.0 37.0 8 35.670533089510016 37.0 35.0 37.0 35.0 37.0 9 37.43658035456191 39.0 37.0 39.0 35.0 39.0 10 37.269348930961485 39.0 37.0 39.0 34.0 39.0 11 37.24455546526024 39.0 37.0 39.0 34.0 39.0 12 37.164015854229596 39.0 37.0 39.0 34.0 39.0 13 37.04882413944367 39.0 37.0 39.0 33.0 39.0 14 38.13472199388676 40.0 37.0 41.0 33.0 41.0 15 38.16758749706843 40.0 37.0 41.0 33.0 41.0 16 38.276256912071666 40.0 37.0 41.0 34.0 41.0 17 38.26500280885088 40.0 37.0 41.0 34.0 41.0 18 38.268857284663206 40.0 37.0 41.0 34.0 41.0 19 38.27082932393569 40.0 37.0 41.0 34.0 41.0 20 38.21298803297069 40.0 37.0 41.0 34.0 41.0 21 38.17990124999708 40.0 37.0 41.0 34.0 41.0 22 38.10857903311639 40.0 37.0 41.0 34.0 41.0 23 37.84495376888572 40.0 36.0 41.0 33.0 41.0 24 37.588962657476806 39.0 36.0 41.0 33.0 41.0 25 37.559187279840245 39.0 36.0 41.0 33.0 41.0 26 37.73229898016507 39.0 36.0 41.0 33.0 41.0 27 37.783060096942364 40.0 36.0 41.0 33.0 41.0 28 37.80317240422831 40.0 36.0 41.0 33.0 41.0 29 37.846241710773285 40.0 36.0 41.0 33.0 41.0 30 37.79234216089067 40.0 36.0 41.0 33.0 41.0 31 37.68213235804005 40.0 36.0 41.0 33.0 41.0 32 37.55688643749664 40.0 36.0 41.0 33.0 41.0 33 37.499507184970426 40.0 36.0 41.0 33.0 41.0 34 37.34872526477608 39.0 36.0 41.0 33.0 41.0 35 37.26233576403471 39.0 36.0 41.0 32.0 41.0 36 37.211940070575785 39.0 35.0 41.0 32.0 41.0 37 37.19130572997788 39.0 35.0 41.0 32.0 41.0 38 37.13817988021283 39.0 35.0 41.0 32.0 41.0 39 37.08579500608909 39.0 35.0 41.0 32.0 41.0 40 36.97462061034265 39.0 35.0 41.0 31.0 41.0 41 36.8596127759472 39.0 35.0 41.0 31.0 41.0 42 36.92490044357248 39.0 35.0 41.0 31.0 41.0 43 36.89611459176606 39.0 35.0 41.0 31.0 41.0 44 36.839179457132104 39.0 35.0 41.0 31.0 41.0 45 36.86269822656713 39.0 35.0 41.0 31.0 41.0 46 36.72451990466269 39.0 35.0 41.0 31.0 41.0 47 36.5569729236125 39.0 35.0 40.0 31.0 41.0 48 36.57511630824275 39.0 35.0 40.0 31.0 41.0 49 36.57909544872659 39.0 35.0 40.0 31.0 41.0 50 36.51631665761549 39.0 35.0 40.0 31.0 41.0 51 35.47551858555464 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 6.0 10 11.0 11 13.0 12 16.0 13 15.0 14 16.0 15 30.0 16 65.0 17 132.0 18 250.0 19 460.0 20 849.0 21 1533.0 22 2383.0 23 3594.0 24 4927.0 25 6169.0 26 7312.0 27 8657.0 28 10615.0 29 13488.0 30 17230.0 31 23061.0 32 31096.0 33 43430.0 34 75256.0 35 104776.0 36 98477.0 37 157906.0 38 294434.0 39 376952.0 40 279.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.141456223611016 22.1085003385425 23.36675645120196 11.383286986644519 2 30.394103984360815 26.83726507527019 24.83016386391916 17.93846707644983 3 29.37512612558563 27.591797999599514 26.553107539641417 16.479968335173435 4 28.254702390367157 24.433496462250368 28.46608692400052 18.845714223381947 5 25.508183846107695 28.92251545257561 24.765416150152365 20.803884551164327 6 24.487024355581042 33.62050359852366 26.023983924490608 15.868488121404688 7 74.78571311698299 5.793868523962498 13.195755479596679 6.224662879457833 8 73.00776115495586 6.94545842705909 11.32516208355182 8.72161833443324 9 66.77452757933153 7.4864251860035855 13.278423739893396 12.460623494771486 10 35.95687537350704 29.594613862867302 20.250451325068585 14.198059438557067 11 27.32143149325681 23.765060076684357 27.304445931763233 21.6090624982956 12 24.39017548889978 20.631613558218014 33.41776767647648 21.56044327640573 13 22.195687693181544 25.030562323375484 34.377373985443846 18.396375997999133 14 17.56969339503196 30.196198818334747 29.486155598651443 22.747952187981856 15 14.921504110427966 25.975208871761346 38.406458253307704 20.696828764502982 16 16.58975116152412 27.16139322120266 30.842117647608813 25.406737969664412 17 17.21525615083802 26.832200572989994 29.060659491695382 26.8918837844766 18 17.781623336603182 26.82744773238858 32.755019116548226 22.63590981446001 19 18.30848740458283 27.41913742955472 29.250149792394364 25.02222537346809 20 20.96750693252447 28.18372144302474 30.660263058039977 20.188508566410817 21 20.158043637309955 29.203400540577185 30.588580871920296 20.049974950192567 22 18.189354727868707 25.43143715770782 28.86197517147236 27.517232942951107 23 17.662646490728452 27.695269676954876 30.050341152665133 24.59174267965153 24 21.374926662111214 24.24369449987261 28.80353860670088 25.577840231315296 25 16.938656410919688 30.69205254927566 26.533472853878198 25.835818185926453 26 17.216970290071316 29.117459832653264 27.95340346240542 25.71216641487 27 19.788958294213298 27.65958441473443 27.561956393856214 24.989500897196056 28 14.681446702346735 26.298090370978688 29.943285366003785 29.07717756067079 29 17.668723893464687 25.677571968525285 27.212116159424298 29.441587978585726 30 20.197624670515168 26.02686679501933 26.258976830291648 27.51653170417385 31 19.634374101537816 26.628451750486775 24.7996210193986 28.937553128576806 32 19.63149123100909 30.578841444458384 22.843943985046472 26.945723339486054 33 21.44863464914297 26.32208832024484 23.069353294224985 29.1599237363872 34 18.288930634239307 25.98775325433229 28.626982265671323 27.096333845757076 35 16.922138341944283 29.084189948443367 24.91664997978095 29.077021729831397 36 20.052156581944036 30.028992327668625 24.39710996125266 25.52174112913468 37 17.391500830188797 25.380402557807397 29.98613884683621 27.2419577651676 38 19.017907300908572 27.882422515063 23.289386439444527 29.810283744583906 39 22.117538527227154 24.85587595241861 28.17990358745967 24.846681932894565 40 21.892129218048638 25.35515796182612 30.3927015068063 22.36001131331894 41 17.15549502393172 29.62320882189548 26.52451258061324 26.696783573559557 42 18.848597093910676 27.366077028742218 27.537179290393105 26.248146586953997 43 21.9542278075458 25.27786586548838 25.538103367270693 27.22980295969513 44 19.785919592845183 22.596250865835103 27.379634311769202 30.238195229550513 45 20.277643806542244 21.71043045931919 26.785217574913727 31.226708159224835 46 24.356048535073235 23.839079725394896 27.21157075148643 24.59330098804544 47 16.270375856193066 24.744145240575545 33.84303003717345 25.142448866057936 48 18.09803785598581 23.97091261551935 28.987574828021188 28.943474700473647 49 19.65104800135261 20.954962549953525 33.737922136004485 25.656067312689384 50 19.674734288939984 20.79289847698729 31.18377676297272 28.348590471100003 51 18.536078345512813 20.17440587544597 26.998472078619773 34.29104370042144 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1384.0 1 1457.0 2 1530.0 3 2156.5 4 2783.0 5 2138.5 6 1494.0 7 1558.5 8 1623.0 9 1840.5 10 2058.0 11 2217.5 12 2377.0 13 2503.5 14 2630.0 15 2640.0 16 2650.0 17 2700.5 18 2751.0 19 3083.5 20 3416.0 21 3374.5 22 3333.0 23 3847.5 24 4362.0 25 5133.0 26 7630.5 27 9357.0 28 10770.0 29 12183.0 30 13989.5 31 15796.0 32 17936.5 33 20077.0 34 23615.0 35 27153.0 36 28000.5 37 28848.0 38 33034.0 39 37220.0 40 43337.0 41 49454.0 42 60002.0 43 70550.0 44 84479.0 45 98408.0 46 135962.5 47 173517.0 48 180418.5 49 187320.0 50 181110.5 51 174901.0 52 140106.5 53 105312.0 54 86030.5 55 66749.0 56 55761.0 57 44773.0 58 40025.0 59 35277.0 60 31683.5 61 28090.0 62 24684.0 63 21278.0 64 17933.0 65 14588.0 66 11570.0 67 8552.0 68 7320.5 69 6089.0 70 4687.0 71 3285.0 72 3179.5 73 3074.0 74 2430.5 75 1293.5 76 800.0 77 537.5 78 275.0 79 255.5 80 236.0 81 191.5 82 147.0 83 85.0 84 23.0 85 17.5 86 12.0 87 10.0 88 8.0 89 6.0 90 4.0 91 3.0 92 2.0 93 2.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1283443.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.85690560317822 #Duplication Level Percentage of deduplicated Percentage of total 1 62.27870779830709 12.36662421838903 2 12.689141350673323 5.03934163971411 3 6.3443867744317926 3.7793966786983337 4 3.975513809507748 3.1576560975810715 5 2.64215558093056 2.6232516979724316 6 1.8641791768149303 2.2210097964854727 7 1.410626795501072 1.9607478183705 8 1.036830140783985 1.6470590585662062 9 0.811460617659254 1.4501787197000853 >10 5.017414247661186 19.39511193715073 >50 1.2147174157601708 17.644615599120915 >100 0.6890803269423321 19.186295785425127 >500 0.015074871861719111 1.9813965146072203 >1k 0.008330850239371088 2.9236882932313035 >5k 0.0011901214627672984 1.9694229023056935 >10k+ 0.0011901214627672984 2.6542032426818145 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC 12185 0.9493993889872787 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGC 11329 0.8827037897280985 No Hit GAATCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTC 10180 0.7931789724981942 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCG 9526 0.7422222880174656 No Hit CCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC 9119 0.7105107122014769 No Hit CTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGCT 6356 0.49523040758335196 No Hit TCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC 4111 0.32031029036739456 No Hit ACTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC 3202 0.2494851738643633 No Hit GAATGACTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCT 2471 0.19252900206709608 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACCCGTAAT 2414 0.18808782314446376 No Hit AGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTG 2091 0.16292114258288057 No Hit GCCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTG 2011 0.15668790900725627 No Hit ACCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTG 1846 0.14383186475753112 No Hit GAACTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCT 1665 0.1297291737926811 No Hit CGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTG 1655 0.12895001959572805 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACCCGTAATCGTA 1617 0.1259892336473065 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTC 1602 0.12482050235187694 No Hit GGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTG 1584 0.12341802479736148 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCC 1524 0.11874309961564322 No Hit CGTTCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTC 1293 0.10074463766602802 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.518059625554076 0.0 2 0.0 0.0 0.0 2.8626904350251627 0.0 3 0.0 0.0 0.0 3.95779165884266 0.0 4 0.0 0.0 0.0 5.353880148943117 0.0 5 0.0 0.0 0.0 9.451374155299456 0.0 6 0.0 0.0 0.0 10.944467342920566 0.0 7 0.0 0.0 0.0 12.725769667994605 0.0 8 0.0 0.0 0.0 15.202467113849233 0.0 9 0.0 0.0 0.0 16.042784915263084 0.0 10 0.0 0.0 0.0 18.718088765921042 0.0 11 0.0 0.0 0.0 21.630878815810284 0.0 12 0.0 0.0 0.0 24.972749081961567 0.0 13 7.791541969530396E-5 0.0 0.0 25.918876023321644 0.0 14 7.791541969530396E-5 0.0 0.0 26.29551916212874 0.0 15 7.791541969530396E-5 0.0 0.0 27.12866874493063 0.0 16 7.791541969530396E-5 0.0 0.0 28.489617380748502 0.0 17 7.791541969530396E-5 0.0 0.0 30.10036285210952 0.0 18 7.791541969530396E-5 0.0 0.0 31.772349843351048 0.0 19 3.895770984765198E-4 0.0 0.0 32.97863637107375 0.0 20 3.895770984765198E-4 0.0 0.0 33.97790162866602 0.0 21 3.895770984765198E-4 0.0 0.0 35.16541054024214 0.0 22 3.895770984765198E-4 0.0 0.0 36.33079147262481 0.0 23 3.895770984765198E-4 0.0 0.0 37.4791089280942 0.0 24 3.895770984765198E-4 0.0 0.0 38.39562800997006 0.0 25 3.895770984765198E-4 0.0 0.0 39.15732915291135 0.0 26 3.895770984765198E-4 0.0 0.0 39.90290180397571 0.0 27 3.895770984765198E-4 0.0 0.0 40.605309312528874 0.0 28 3.895770984765198E-4 0.0 0.0 41.288939204935474 0.0 29 3.895770984765198E-4 0.0 0.0 42.00217695682629 0.0 30 3.895770984765198E-4 0.0 0.0 42.826677928041995 0.0 31 5.454079378671277E-4 0.0 0.0 43.507580780759255 0.0 32 5.454079378671277E-4 0.0 0.0 44.164875261308836 0.0 33 5.454079378671277E-4 0.0 0.0 44.80658665791936 0.0 34 5.454079378671277E-4 0.0 0.0 45.452349656354045 0.0 35 5.454079378671277E-4 0.0 0.0 46.17361269647347 0.0 36 5.454079378671277E-4 0.0 0.0 46.77636638323634 0.0 37 6.233233575624317E-4 0.0 0.0 47.40202720338963 0.0 38 6.233233575624317E-4 0.0 0.0 47.98787324407862 0.0 39 6.233233575624317E-4 0.0 0.0 48.618286904833326 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 35 1.2120836E-7 45.000004 1 TTTCGAT 35 1.2120836E-7 45.000004 16 TACGGGT 70 0.0 45.000004 4 TCGATAG 35 1.2120836E-7 45.000004 1 CGTACAC 35 1.2120836E-7 45.000004 21 CCTATAG 35 1.2120836E-7 45.000004 2 TTACCGG 35 1.2120836E-7 45.000004 2 AATCGGC 35 1.2120836E-7 45.000004 19 AACCGCA 20 7.0335955E-4 45.0 13 CGAACGT 20 7.0335955E-4 45.0 37 ACGTTCG 20 7.0335955E-4 45.0 40 TTAGCGA 25 3.8910617E-5 45.0 2 GCGCGCA 20 7.0335955E-4 45.0 36 CGCATAT 20 7.0335955E-4 45.0 45 CGCATAC 20 7.0335955E-4 45.0 11 TAGCGAA 45 3.8562575E-10 45.0 1 CACGCAT 20 7.0335955E-4 45.0 9 CGTTCTA 20 7.0335955E-4 45.0 40 CGCGACA 20 7.0335955E-4 45.0 38 ATCACCG 25 3.8910617E-5 45.0 38 >>END_MODULE