##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934997.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1334127 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.125497797436076 33.0 31.0 34.0 30.0 34.0 2 32.299270609169895 34.0 31.0 34.0 30.0 34.0 3 32.32455231023733 34.0 31.0 34.0 30.0 34.0 4 35.88437532558744 37.0 35.0 37.0 35.0 37.0 5 35.79598718862597 37.0 35.0 37.0 35.0 37.0 6 35.70973528007453 37.0 35.0 37.0 33.0 37.0 7 36.017966055705344 37.0 35.0 37.0 35.0 37.0 8 35.60560876138479 37.0 35.0 37.0 35.0 37.0 9 37.46874547925347 39.0 37.0 39.0 35.0 39.0 10 37.28418958614885 39.0 37.0 39.0 34.0 39.0 11 37.24503514283123 39.0 37.0 39.0 34.0 39.0 12 37.20514838542358 39.0 37.0 39.0 34.0 39.0 13 37.108611848797004 39.0 37.0 39.0 33.0 39.0 14 38.2271387956319 40.0 37.0 41.0 33.0 41.0 15 38.20967868876051 40.0 37.0 41.0 33.0 41.0 16 38.36125871075242 40.0 38.0 41.0 34.0 41.0 17 38.304114226006966 40.0 37.0 41.0 34.0 41.0 18 38.33096099546745 40.0 37.0 41.0 34.0 41.0 19 38.33220375571441 40.0 37.0 41.0 34.0 41.0 20 38.218508432855344 40.0 37.0 41.0 34.0 41.0 21 38.24682058004973 40.0 37.0 41.0 34.0 41.0 22 38.21317235915321 40.0 37.0 41.0 34.0 41.0 23 37.93770832911709 40.0 37.0 41.0 33.0 41.0 24 37.69802649972604 40.0 36.0 41.0 33.0 41.0 25 37.712306249704866 39.0 36.0 41.0 33.0 41.0 26 37.91791036385592 40.0 37.0 41.0 33.0 41.0 27 37.8821109234728 40.0 37.0 41.0 33.0 41.0 28 37.86872913898002 40.0 37.0 41.0 33.0 41.0 29 37.94290873357634 40.0 37.0 41.0 34.0 41.0 30 37.80812846153327 40.0 36.0 41.0 33.0 41.0 31 37.773486332260724 40.0 37.0 41.0 33.0 41.0 32 37.60690998683034 40.0 36.0 41.0 33.0 41.0 33 37.50051007138001 40.0 36.0 41.0 33.0 41.0 34 37.43624782348307 40.0 36.0 41.0 33.0 41.0 35 37.39827017967555 40.0 36.0 41.0 33.0 41.0 36 37.37356638460956 40.0 36.0 41.0 33.0 41.0 37 37.29168662353734 40.0 36.0 41.0 32.0 41.0 38 37.2137165352324 40.0 36.0 41.0 32.0 41.0 39 37.18176305554119 39.0 36.0 41.0 32.0 41.0 40 37.12516049821344 39.0 36.0 41.0 32.0 41.0 41 37.06346996950065 39.0 35.0 41.0 32.0 41.0 42 37.203162067779154 39.0 36.0 41.0 32.0 41.0 43 37.14405824932709 39.0 36.0 41.0 32.0 41.0 44 37.07672657850414 39.0 35.0 41.0 32.0 41.0 45 37.096409862029624 39.0 35.0 41.0 32.0 41.0 46 36.99704675791735 39.0 35.0 41.0 32.0 41.0 47 36.8513215008766 39.0 35.0 41.0 31.0 41.0 48 36.883400905610934 39.0 35.0 41.0 31.0 41.0 49 36.89737034030493 39.0 35.0 41.0 31.0 41.0 50 36.84062386864219 39.0 35.0 41.0 31.0 41.0 51 35.86784466546288 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 8.0 10 16.0 11 5.0 12 18.0 13 8.0 14 7.0 15 19.0 16 48.0 17 92.0 18 186.0 19 471.0 20 961.0 21 1839.0 22 2929.0 23 4318.0 24 5383.0 25 6297.0 26 7377.0 27 8507.0 28 10196.0 29 12632.0 30 16787.0 31 22796.0 32 31128.0 33 43059.0 34 71199.0 35 101258.0 36 100053.0 37 157488.0 38 297908.0 39 430811.0 40 318.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.07698817279015 20.74899915825105 24.70199613679957 10.472016532159232 2 27.36508593259862 30.741975838881906 24.5815428366265 17.311395391892976 3 28.182399426741235 30.77083366126313 26.116853942690614 14.92991296930502 4 26.55706690592425 23.92860649698267 32.8054975275967 16.70882906949638 5 29.244517201136023 26.974568388166944 23.63013416263969 20.150780248057345 6 23.01894797122013 37.265117938547085 24.158794477587218 15.557139612645573 7 74.36728287486874 5.346567455721981 14.553112259927278 5.733037409482006 8 73.81771000811767 8.98475182647529 9.543544205311788 7.653993960095254 9 68.59541857709198 6.748008248090325 10.866131934965711 13.790441239851978 10 37.05486808976956 31.517464229417442 17.82581418410691 13.601853496706084 11 25.89266239271074 23.1858736087344 30.208818200965876 20.712645797588987 12 22.294204374845872 19.707044381831714 34.76520601112188 23.233545232200534 13 22.040855180953535 22.887176408242993 37.51187105875228 17.56009735205119 14 17.9347993107103 30.44702640753092 29.898952648436016 21.719221633322764 15 14.334842185189267 25.180961032945138 39.871316598794564 20.612880183071027 16 16.815940311529562 27.049223949444094 30.429786669484987 25.705049069541356 17 17.19476481624313 26.796099621700183 31.70147969421202 24.307655867844666 18 17.825214541044442 24.826571983027105 33.545606977446674 23.80260649848178 19 17.83788200073906 27.346272131513714 30.23122986042558 24.584616007321642 20 20.15565234793989 27.902665938100345 32.806996635252865 19.1346850787069 21 19.8857380144469 30.143756928688198 30.51785924428484 19.45264581258006 22 17.643447737734114 24.894556515234306 30.873597491093424 26.588398255938152 23 16.96997362320079 28.91981048281011 30.114674240158546 23.995541653830557 24 19.962042594145835 24.496393521756175 29.41579025085318 26.12577363324481 25 16.259021817263275 31.856712292008183 26.995405984587673 24.88885990614087 26 17.023566721908782 27.071860475052222 29.37269090573836 26.53188189730063 27 20.1593251616975 30.27627804549342 27.178821806319785 22.385574986489292 28 16.346944481297506 27.048174574084776 31.539800933494337 25.06508001112338 29 18.599353734689426 23.151394132642544 28.47884796574839 29.77040416691964 30 18.332362661125963 32.639171533144896 26.91617814495921 22.112287660769926 31 24.1461270178926 28.357195379450385 21.877752267962496 25.618925334694527 32 22.041529779398815 30.887089459998933 22.07136202175655 25.000018738845704 33 19.76805806343774 31.19568077102105 22.793856956646554 26.242404208894655 34 21.488733831186984 27.685520194104456 24.586789713423084 26.238956261285466 35 19.99292421186289 27.78431138864591 24.369194237130348 27.853570162360853 36 21.343695165452765 30.83229707516601 23.66056604805989 24.163441711321337 37 20.03797239693073 30.12839107521248 27.774792055029245 22.05884447282755 38 22.50175582984229 29.13530720838421 23.05470168881973 25.308235272953773 39 20.79217345874868 29.366169787434032 25.539547584300443 24.302109169516843 40 22.13897177704971 27.932723046606505 27.644819421239507 22.283485755104273 41 19.67983557787227 31.94635892984701 22.862516087299035 25.511289404981685 42 22.72729657671271 25.004965794111055 28.498861052958226 23.768876576218005 43 22.667257315083198 26.46014959595301 25.87159993014158 25.00099315882221 44 20.364328133678427 24.513033616739634 27.91233518248263 27.21030306709931 45 20.349187146351134 23.10949407365266 26.419223956939632 30.122094823056578 46 24.943127603294137 26.458350666765607 25.477859304249144 23.12066242569111 47 17.44803905475266 25.469614212140222 33.68982113397001 23.392525599137112 48 19.657124096881333 26.214146029575897 26.995331029204866 27.133398844337908 49 20.604485180196487 21.723868867056883 33.43309894785129 24.238547004895334 50 21.36303365421733 22.197511931023058 29.577319100805244 26.862135313954365 51 19.870746937885222 21.899114552062883 26.10291224148825 32.12722626856363 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 992.0 1 1060.0 2 1128.0 3 1759.0 4 2390.0 5 1826.5 6 1263.0 7 1350.0 8 1437.0 9 1672.0 10 1907.0 11 1944.5 12 1982.0 13 2252.5 14 2523.0 15 2462.0 16 2401.0 17 2523.5 18 2646.0 19 2724.5 20 2803.0 21 3295.5 22 3788.0 23 4337.5 24 4887.0 25 6307.0 26 9439.5 27 11152.0 28 14006.5 29 16861.0 30 19349.5 31 21838.0 32 24792.5 33 27747.0 34 30670.5 35 33594.0 36 35984.0 37 38374.0 38 41124.5 39 43875.0 40 49804.5 41 55734.0 42 65227.5 43 74721.0 44 86807.0 45 98893.0 46 155228.0 47 211563.0 48 199077.0 49 186591.0 50 175146.0 51 163701.0 52 132377.5 53 101054.0 54 82700.5 55 64347.0 56 54538.0 57 44729.0 58 38425.5 59 32122.0 60 28986.0 61 25850.0 62 20570.0 63 15290.0 64 13647.5 65 12005.0 66 9637.0 67 7269.0 68 5219.5 69 3170.0 70 2803.5 71 2437.0 72 2029.0 73 1621.0 74 1290.5 75 668.0 76 376.0 77 282.5 78 189.0 79 171.0 80 153.0 81 85.0 82 17.0 83 13.5 84 10.0 85 6.5 86 3.0 87 2.5 88 2.0 89 2.0 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1334127.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.781582191285572 #Duplication Level Percentage of deduplicated Percentage of total 1 62.90790180204192 12.44417829978414 2 12.988600111526535 5.138701213118061 3 6.270266692537814 3.7210738781915125 4 3.9080198544412768 3.09227263823224 5 2.617468600368502 2.5888835125649368 6 1.776283135278884 2.10826145013082 7 1.3081252509167471 1.8113751017253987 8 1.0025620985191293 1.5865811642979115 9 0.7373223677405271 1.3126862717039267 >10 4.577666571250658 17.972743962352528 >50 1.193079585760266 17.40854425018481 >100 0.6927681553627463 19.191737381460307 >500 0.00958450685338376 1.2473946749790652 >1k 0.007667605482707008 3.174607313632275 >5k 0.0011501408224060513 1.4741523402385133 >10k+ 0.0015335210965414018 5.726806547403584 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGC 24229 1.8160939700643193 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCG 20442 1.5322379353689717 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTC 19398 1.4539845157170195 No Hit GCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGC 11444 0.8577894008591386 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGC 8244 0.617932175872312 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGCT 5689 0.4264211727968927 Illumina Single End Adapter 1 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAGCAAGAT 5505 0.41262938236015007 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCT 4901 0.3673563311438866 No Hit TCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGC 3948 0.2959238513274973 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAGCAAGATCGTA 3565 0.2672159397118865 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTC 3533 0.2648173674620182 No Hit GAACTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCT 2857 0.2141475286835511 No Hit ACTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGC 2682 0.20103033669208403 Illumina Single End Adapter 1 (95% over 21bp) GAATGATCCGGCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGC 2347 0.17592028345127564 No Hit GAATGATCCCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCG 1946 0.14586317494511392 No Hit CGCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTG 1703 0.12764901692267677 No Hit ACCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTG 1693 0.12689946309459293 No Hit TTGGCAGGGAAGGTTTTTTGTACTCAATTCTTTAAGAAATGACAAATTTTG 1609 0.12060321093868874 No Hit GCCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTG 1495 0.11205829729853305 No Hit AGCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTG 1481 0.11100892193921569 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.495538280838332E-5 0.0 0.0 0.4468839923035813 0.0 2 7.495538280838332E-5 0.0 0.0 2.52772037444711 0.0 3 7.495538280838332E-5 0.0 0.0 3.4014003164616264 0.0 4 7.495538280838332E-5 0.0 0.0 4.547468119601807 0.0 5 7.495538280838332E-5 0.0 0.0 8.444773248723697 0.0 6 7.495538280838332E-5 0.0 0.0 9.7117440843338 0.0 7 7.495538280838332E-5 0.0 0.0 11.43601771045785 0.0 8 7.495538280838332E-5 0.0 0.0 13.735723810401858 0.0 9 7.495538280838332E-5 0.0 0.0 14.507764253328206 0.0 10 7.495538280838332E-5 0.0 0.0 17.8337594546846 0.0 11 7.495538280838332E-5 0.0 0.0 20.353234737022788 0.0 12 7.495538280838332E-5 0.0 0.0 24.40389857937063 0.0 13 7.495538280838332E-5 0.0 0.0 25.226983637989488 0.0 14 7.495538280838332E-5 0.0 0.0 25.560909868400834 0.0 15 7.495538280838332E-5 0.0 0.0 26.363831929044235 0.0 16 7.495538280838332E-5 0.0 0.0 27.50367843541132 0.0 17 7.495538280838332E-5 0.0 0.0 28.99671470557151 0.0 18 7.495538280838332E-5 0.0 0.0 30.551888988079845 0.0 19 7.495538280838332E-5 0.0 0.0 32.04559985668531 0.0 20 7.495538280838332E-5 0.0 0.0 33.02204362853012 0.0 21 7.495538280838332E-5 0.0 0.0 34.04218638855222 0.0 22 1.4991076561676663E-4 0.0 0.0 35.189828254731374 0.0 23 1.4991076561676663E-4 0.0 0.0 36.183211943090875 0.0 24 1.4991076561676663E-4 0.0 0.0 37.00367356331144 0.0 25 1.4991076561676663E-4 0.0 0.0 37.69858491732796 0.0 26 2.2486614842514994E-4 0.0 0.0 38.31951530851261 0.0 27 2.2486614842514994E-4 0.0 0.0 38.96240762686011 0.0 28 7.495538280838331E-4 0.0 0.0 39.59495610238006 0.0 29 7.495538280838331E-4 0.0 0.0 40.27457655830367 0.0 30 7.495538280838331E-4 0.0 0.0 41.04841593041742 0.0 31 7.495538280838331E-4 0.0 0.0 41.73215893239549 0.0 32 7.495538280838331E-4 0.0 0.0 42.374526563063334 0.0 33 7.495538280838331E-4 0.0 0.0 42.97551882242095 0.0 34 7.495538280838331E-4 0.0 0.0 43.596674079754024 0.0 35 7.495538280838331E-4 0.0 0.0 44.272846588068454 0.0 36 7.495538280838331E-4 0.0 0.0 44.885531887144175 0.0 37 7.495538280838331E-4 0.0 0.0 45.50653723371163 0.0 38 7.495538280838331E-4 0.0 0.0 46.09298814880442 0.0 39 8.245092108922164E-4 0.0 0.0 46.681387903850236 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGGC 20 7.0336944E-4 45.000004 42 GGTACGA 25 3.891143E-5 45.000004 8 GTCGCAC 20 7.0336944E-4 45.000004 25 TACCCGT 25 3.891143E-5 45.000004 18 TCGCAAT 20 7.0336944E-4 45.000004 30 TGCCCGT 25 3.891143E-5 45.000004 42 GTCGACG 25 3.891143E-5 45.000004 1 CAACGTT 25 3.891143E-5 45.000004 43 ACGCATA 20 7.0336944E-4 45.000004 10 CGACGAT 20 7.0336944E-4 45.000004 31 TCCGATC 25 3.891143E-5 45.000004 34 CGCATTC 20 7.0336944E-4 45.000004 23 CGCGCGA 20 7.0336944E-4 45.000004 45 CGTCTCG 25 3.891143E-5 45.000004 41 GTCTACG 20 7.0336944E-4 45.000004 1 GCGCATC 20 7.0336944E-4 45.000004 43 CGTTACC 20 7.0336944E-4 45.000004 15 ATCCGGC 460 0.0 45.000004 6 CGCCTCG 20 7.0336944E-4 45.000004 40 TCGGATA 20 7.0336944E-4 45.000004 11 >>END_MODULE