##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934992.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1967120 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1954303753711 33.0 31.0 34.0 30.0 34.0 2 32.372093212412054 34.0 31.0 34.0 30.0 34.0 3 32.37764498352922 34.0 31.0 34.0 30.0 34.0 4 35.92259292773191 37.0 35.0 37.0 35.0 37.0 5 35.84510350156574 37.0 35.0 37.0 35.0 37.0 6 35.793526068567246 37.0 35.0 37.0 35.0 37.0 7 36.131343791939486 37.0 35.0 37.0 35.0 37.0 8 35.93630739354996 37.0 35.0 37.0 35.0 37.0 9 37.652616007157675 39.0 38.0 39.0 35.0 39.0 10 37.37462737402904 39.0 37.0 39.0 34.0 39.0 11 37.285295253975356 39.0 37.0 39.0 34.0 39.0 12 37.268004493879374 39.0 37.0 39.0 34.0 39.0 13 37.23569024767173 39.0 37.0 39.0 34.0 39.0 14 38.31547287404937 40.0 38.0 41.0 34.0 41.0 15 38.37304129895482 40.0 38.0 41.0 34.0 41.0 16 38.43295477652609 40.0 38.0 41.0 34.0 41.0 17 38.471673309203304 40.0 38.0 41.0 34.0 41.0 18 38.48771961039489 40.0 38.0 41.0 34.0 41.0 19 38.485009557119035 40.0 38.0 41.0 34.0 41.0 20 38.45588271178169 40.0 38.0 41.0 34.0 41.0 21 38.41175627313026 40.0 38.0 41.0 34.0 41.0 22 38.36544796453699 40.0 37.0 41.0 34.0 41.0 23 38.11707165805848 40.0 37.0 41.0 34.0 41.0 24 37.908144902192035 40.0 37.0 41.0 33.0 41.0 25 37.875216051893126 40.0 37.0 41.0 33.0 41.0 26 38.080038838505025 40.0 37.0 41.0 34.0 41.0 27 38.11578144698849 40.0 37.0 41.0 34.0 41.0 28 38.12651693846842 40.0 37.0 41.0 34.0 41.0 29 38.18657580625483 40.0 37.0 41.0 34.0 41.0 30 38.11069736467526 40.0 37.0 41.0 34.0 41.0 31 38.058569888974745 40.0 37.0 41.0 34.0 41.0 32 38.00098214648827 40.0 37.0 41.0 34.0 41.0 33 37.94152009028427 40.0 37.0 41.0 34.0 41.0 34 37.853450221643826 40.0 37.0 41.0 34.0 41.0 35 37.81113760217983 40.0 37.0 41.0 33.0 41.0 36 37.7509211436008 40.0 37.0 41.0 33.0 41.0 37 37.677693785839196 40.0 37.0 41.0 33.0 41.0 38 37.65188854772459 40.0 37.0 41.0 33.0 41.0 39 37.607765159217536 40.0 36.0 41.0 33.0 41.0 40 37.549078856399206 40.0 36.0 41.0 33.0 41.0 41 37.49946724144943 40.0 36.0 41.0 33.0 41.0 42 37.48922282321363 40.0 36.0 41.0 33.0 41.0 43 37.398981251779254 40.0 36.0 41.0 33.0 41.0 44 37.30035127496035 40.0 36.0 41.0 32.0 41.0 45 37.32056356500875 40.0 36.0 41.0 33.0 41.0 46 37.21099627882386 39.0 35.0 41.0 32.0 41.0 47 37.142873846028714 39.0 35.0 41.0 32.0 41.0 48 37.106188234576436 39.0 35.0 41.0 32.0 41.0 49 37.07630190329009 39.0 35.0 41.0 32.0 41.0 50 37.01095815201919 39.0 35.0 41.0 32.0 41.0 51 36.00283053397861 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 14.0 10 22.0 11 21.0 12 16.0 13 17.0 14 24.0 15 47.0 16 82.0 17 145.0 18 275.0 19 620.0 20 962.0 21 1608.0 22 2550.0 23 3715.0 24 5314.0 25 7154.0 26 9135.0 27 11368.0 28 14149.0 29 18016.0 30 23126.0 31 31151.0 32 41737.0 33 59270.0 34 103558.0 35 138721.0 36 137968.0 37 220325.0 38 433575.0 39 701856.0 40 572.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.86665785513848 23.06137907194274 26.73909065029078 10.332872422628006 2 30.482176989710847 24.293179877180854 26.778132498271585 18.446510634836716 3 30.948086542763026 24.919933710195615 27.419882874456057 16.712096872585303 4 28.858483468217493 24.831886209280572 27.272052543820408 19.037577778681523 5 25.381217210947987 30.111279433893205 24.973514579690107 19.533988775468707 6 26.030084590670626 32.704613851722314 24.825379234617106 16.439922322989954 7 81.53391760543333 4.916883565822116 8.276363414534954 5.272835414209606 8 81.17664402781732 3.6911830493310016 8.345449184594738 6.786723738256945 9 75.59792996868518 7.129559965838384 10.422953353125381 6.849556712351052 10 34.98530847126764 35.77422831347351 16.997387042986702 12.243076172272154 11 23.544572776444753 25.0441762576762 31.135721257472852 20.275529708406197 12 23.0797307739233 23.271534019276913 33.97393143275448 19.674803774045305 13 21.921895969742568 25.553906218227663 34.219773069258615 18.304424742771157 14 17.99483508886087 29.749176461019154 32.02229655537029 20.233691894749683 15 15.780074423522713 28.669730367237385 36.135975436170646 19.41421977306926 16 18.885172231485623 30.117633901338 31.00883525153524 19.98835861564114 17 19.321902070031317 28.56724551628777 28.990808898287852 23.120043515393064 18 19.926745699296433 27.793728903168084 32.441284720810124 19.838240676725366 19 19.870368864126238 28.94012566594819 29.517060474195777 21.672444995729798 20 21.089206555776975 31.166273536947415 29.643946480133394 18.10057342714222 21 20.11321119199642 29.361858961324174 31.79475578510716 18.730174061572246 22 19.36704420675912 26.84686241815446 29.434299890194804 24.35179348489162 23 17.295691162715034 28.21251372564968 31.03115214120135 23.460642970433934 24 19.88922892350238 27.103023709788932 30.717495628126397 22.290251738582292 25 17.575948594900158 29.74617715238521 28.559976005530928 24.1178982471837 26 17.53914351945992 30.213052584489 28.08517019805604 24.16263369799504 27 19.282046850217576 29.997712391719876 28.842876896173088 21.877363861889464 28 15.483295375981129 28.516867298385456 29.833004595550854 26.166832730082557 29 16.858097116596852 26.36875228760828 30.915856683883035 25.85729391191183 30 19.05415022977754 28.120246858351294 29.77922038309813 23.04638252877303 31 18.287801455935583 28.362580828825894 26.459494082719914 26.890123632518602 32 18.36644434503233 28.308949123591848 27.89479035341006 25.42981617796576 33 19.933964374313717 26.871416080361136 28.565008743747207 24.629610801577943 34 17.195087234129083 24.614410915449998 28.887002318109722 29.303499532311193 35 16.951126519988613 25.113414534954654 29.090345276343083 28.84511366871365 36 19.990442880963034 26.978069461954533 27.922292488511125 25.109195168571315 37 17.303164016430113 26.57956809955671 30.112753670340396 26.00451421367278 38 17.63659563219326 26.535137663182724 29.61924031070804 26.20902639391598 39 20.774431656431737 23.682439302126966 31.49609581520192 24.047033226239375 40 19.93198178047094 23.08186587498475 31.19367400056936 25.79247834397495 41 18.610557566391474 25.011082191223714 26.75591728008459 29.622442962300216 42 20.86247915734678 24.441264386514295 28.29085160030908 26.405404855829843 43 21.555929480662083 24.67348204481679 29.418744153889953 24.351844320631177 44 19.296535035991706 24.2764040831266 28.962493391353856 27.464567489527838 45 18.93544877790882 23.46481150107772 29.159685225100656 28.440054495912808 46 21.392441742242465 23.43166659888568 29.59295823335638 25.582933425515474 47 17.339104884297857 24.097513115620806 31.96983407214608 26.59354792793526 48 18.100522591402658 23.850553092846393 30.346293057871403 27.70263125787954 49 20.94361299768189 21.169171174102242 33.50253161983001 24.384684208385863 50 19.29597584285656 21.85850380251332 31.308562771971204 27.53695758265891 51 18.19446703810647 21.733397047460244 28.132244092887067 31.93989182154622 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 812.0 1 1219.5 2 1627.0 3 2513.5 4 3400.0 5 2548.0 6 1696.0 7 1922.5 8 2149.0 9 2470.0 10 2791.0 11 3322.5 12 3854.0 13 4111.5 14 4369.0 15 4796.0 16 5223.0 17 5155.0 18 5087.0 19 5191.5 20 5296.0 21 6329.5 22 7363.0 23 8613.5 24 9864.0 25 11949.0 26 17895.5 27 21757.0 28 26333.5 29 30910.0 30 34549.0 31 38188.0 32 43704.5 33 49221.0 34 55147.5 35 61074.0 36 67443.5 37 73813.0 38 80693.0 39 87573.0 40 91020.5 41 94468.0 42 105682.5 43 116897.0 44 126426.0 45 135955.0 46 147407.5 47 158860.0 48 183502.5 49 208145.0 50 233960.5 51 259776.0 52 244096.0 53 228416.0 54 179278.5 55 130141.0 56 103716.5 57 77292.0 58 63819.0 59 50346.0 60 39873.0 61 29400.0 62 24812.0 63 20224.0 64 15945.0 65 11666.0 66 9187.5 67 6709.0 68 5105.0 69 3501.0 70 2806.0 71 2111.0 72 1653.0 73 1195.0 74 1011.5 75 737.5 76 647.0 77 467.0 78 287.0 79 173.5 80 60.0 81 66.0 82 72.0 83 42.5 84 13.0 85 8.0 86 3.0 87 3.5 88 4.0 89 3.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1967120.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.11614798078539 #Duplication Level Percentage of deduplicated Percentage of total 1 62.38354532254766 12.549166292744008 2 13.548167089707578 5.450738680899283 3 6.554969632800765 3.95582217428924 4 3.887755447630934 3.1282665559059355 5 2.452103314453617 2.4663436568861643 6 1.756756584042946 2.120350524649616 7 1.2200856535136806 1.718039648872011 8 0.9475092496683444 1.5248189023593073 9 0.7160783484182442 1.2964264220356019 >10 4.481579150835975 18.059383702168212 >50 1.1389704277287434 16.82055113833435 >100 0.892253657490887 25.447660189105026 >500 0.01408147675736398 1.9191466022400854 >1k 0.005120537002677811 1.7362603723456982 >5k 7.680805504016716E-4 1.1466570043279731 >10k+ 2.5602685013389055E-4 0.6603681328374628 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 12822 0.6518158526170239 No Hit CCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 9731 0.4946825816421977 No Hit CTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCT 6819 0.3466489080483143 No Hit TCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 5714 0.29047541583634956 No Hit ACTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 3734 0.18982065151083818 No Hit AGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTG 2531 0.12866525682215627 No Hit ACCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTG 2477 0.12592012688600593 No Hit GCCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTG 2253 0.11453292122493798 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCC 2216 0.11265199886127944 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.0501443735003454E-4 0.0 0.0 0.3639838952377079 0.0 2 3.0501443735003454E-4 0.0 0.0 2.0803001342063525 0.0 3 3.0501443735003454E-4 0.0 0.0 2.9756191793078206 0.0 4 3.0501443735003454E-4 0.0 0.0 4.0687909227703445 0.0 5 3.0501443735003454E-4 0.0 0.0 6.870450201309529 0.0 6 3.0501443735003454E-4 0.0 0.0 8.172709341575501 0.0 7 3.5585017690837364E-4 0.0 0.0 9.631085038025134 0.0 8 3.5585017690837364E-4 0.0 0.0 11.82327463499939 0.0 9 3.5585017690837364E-4 0.0 0.0 12.575389401765017 0.0 10 3.5585017690837364E-4 0.0 0.0 14.314785066493148 0.0 11 3.5585017690837364E-4 0.0 0.0 17.096821749562814 0.0 12 3.5585017690837364E-4 0.0 0.0 19.206454105494327 0.0 13 3.5585017690837364E-4 0.0 0.0 19.97031192809793 0.0 14 3.5585017690837364E-4 0.0 0.0 20.24634999389971 0.0 15 3.5585017690837364E-4 0.0 0.0 20.75419903208752 0.0 16 3.5585017690837364E-4 0.0 0.0 21.84259221603156 0.0 17 3.5585017690837364E-4 0.0 0.0 23.341483996909187 0.0 18 3.5585017690837364E-4 0.0 0.0 24.8482044816788 0.0 19 3.5585017690837364E-4 0.0 0.0 25.820438000732036 0.0 20 3.5585017690837364E-4 0.0 0.0 26.684543901744682 0.0 21 3.5585017690837364E-4 0.0 0.0 27.742486477693276 0.0 22 3.5585017690837364E-4 0.0 0.0 28.905150677132053 0.0 23 3.5585017690837364E-4 0.0 0.0 29.94982512505592 0.0 24 3.5585017690837364E-4 0.0 0.0 30.745404449143926 0.0 25 3.5585017690837364E-4 0.0 0.0 31.406014884704543 0.0 26 3.5585017690837364E-4 0.0 0.0 32.04781609662857 0.0 27 3.5585017690837364E-4 0.0 0.0 32.70019114238074 0.0 28 3.5585017690837364E-4 0.0 0.0 33.34407661962666 0.0 29 3.5585017690837364E-4 0.0 0.0 34.049727520435965 0.0 30 3.5585017690837364E-4 0.0 0.0 34.83442799625849 0.0 31 3.5585017690837364E-4 0.0 0.0 35.51496604172598 0.0 32 3.5585017690837364E-4 0.0 0.0 36.14858269958111 0.0 33 4.0668591646671274E-4 0.0 0.0 36.755256415470335 0.0 34 4.0668591646671274E-4 0.0 0.0 37.40000610028875 0.0 35 4.0668591646671274E-4 0.0 0.0 38.07205457724999 0.0 36 4.0668591646671274E-4 0.0 0.0 38.69138639228923 0.0 37 4.5752165602505184E-4 0.0 0.0 39.31986864044898 0.0 38 4.5752165602505184E-4 0.0 0.0 39.970515271056165 0.0 39 4.5752165602505184E-4 0.0 0.0 40.68760421326609 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGAG 35 1.2125201E-7 45.000004 2 ACACGTT 35 1.2125201E-7 45.000004 42 TCCGCTA 25 3.891821E-5 45.000004 45 TAACGCG 35 1.2125201E-7 45.000004 1 CGCTAAG 25 3.891821E-5 45.000004 2 TTGCGTA 25 3.891821E-5 45.000004 13 TTACGGA 50 2.1827873E-11 45.000004 36 ACCGTAC 25 3.891821E-5 45.000004 44 ACGAGTC 35 1.2125201E-7 45.000004 36 TCGCGTG 25 3.891821E-5 45.000004 1 GTACGTT 25 3.891821E-5 45.000004 29 TGCCCCG 40 6.8193913E-9 45.0 33 GTATTCG 20 7.0345134E-4 45.0 33 CGAGTTA 20 7.0345134E-4 45.0 38 TACTTCG 20 7.0345134E-4 45.0 31 CGACCGG 165 0.0 45.0 2 CCTACGC 20 7.0345134E-4 45.0 28 CAATTCG 20 7.0345134E-4 45.0 23 TCGATTA 20 7.0345134E-4 45.0 41 CGTTCCG 20 7.0345134E-4 45.0 19 >>END_MODULE