##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934990.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1352602 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02069049136405 33.0 31.0 34.0 30.0 34.0 2 32.193628280898594 33.0 31.0 34.0 30.0 34.0 3 32.23150860341771 34.0 31.0 34.0 30.0 34.0 4 35.806481877152336 37.0 35.0 37.0 35.0 37.0 5 35.7178578768921 37.0 35.0 37.0 35.0 37.0 6 35.61295192525222 37.0 35.0 37.0 33.0 37.0 7 35.9115061193167 37.0 35.0 37.0 35.0 37.0 8 35.34490190018941 37.0 35.0 37.0 33.0 37.0 9 37.285162967376955 39.0 37.0 39.0 34.0 39.0 10 37.217308565269015 39.0 37.0 39.0 34.0 39.0 11 37.15801100397604 39.0 37.0 39.0 34.0 39.0 12 36.98806744334254 39.0 35.0 39.0 33.0 39.0 13 36.79937187731498 39.0 35.0 39.0 33.0 39.0 14 37.820889663034656 40.0 36.0 41.0 33.0 41.0 15 37.77312616719478 40.0 36.0 41.0 33.0 41.0 16 37.98974421152712 40.0 36.0 41.0 33.0 41.0 17 37.90232159940618 40.0 36.0 41.0 33.0 41.0 18 37.93086066706984 40.0 36.0 41.0 33.0 41.0 19 37.942819099779534 40.0 36.0 41.0 34.0 41.0 20 37.78647894946185 40.0 36.0 41.0 33.0 41.0 21 37.86208359887092 40.0 36.0 41.0 33.0 41.0 22 37.80823479486205 40.0 36.0 41.0 33.0 41.0 23 37.51304005169296 39.0 35.0 41.0 33.0 41.0 24 37.254537550587685 39.0 35.0 41.0 32.0 41.0 25 37.29359338519387 39.0 35.0 41.0 32.0 41.0 26 37.50908101570159 39.0 35.0 41.0 33.0 41.0 27 37.514448448250114 39.0 36.0 41.0 33.0 41.0 28 37.47521887443609 39.0 36.0 41.0 33.0 41.0 29 37.552668856027125 39.0 36.0 41.0 33.0 41.0 30 37.4901249591528 39.0 36.0 41.0 33.0 41.0 31 37.383494923118555 39.0 36.0 41.0 33.0 41.0 32 37.16411405572371 39.0 35.0 41.0 32.0 41.0 33 37.162486082380475 39.0 35.0 41.0 32.0 41.0 34 37.029702750698284 39.0 35.0 41.0 32.0 41.0 35 36.954474413020236 39.0 35.0 41.0 32.0 41.0 36 37.00979445542739 39.0 35.0 41.0 32.0 41.0 37 36.84842178260863 39.0 35.0 41.0 31.0 41.0 38 36.70476829104201 39.0 35.0 41.0 31.0 41.0 39 36.688126292878465 39.0 35.0 41.0 31.0 41.0 40 36.54297864412444 39.0 35.0 40.0 30.0 41.0 41 36.462688211314195 39.0 35.0 40.0 30.0 41.0 42 36.55106454078879 39.0 35.0 40.0 31.0 41.0 43 36.56659386870639 39.0 35.0 40.0 31.0 41.0 44 36.473845965036276 39.0 35.0 40.0 31.0 41.0 45 36.47380086677382 39.0 35.0 40.0 31.0 41.0 46 36.31858151917563 38.0 35.0 40.0 30.0 41.0 47 36.04662421022592 38.0 35.0 40.0 30.0 41.0 48 36.01025504915711 38.0 35.0 40.0 30.0 41.0 49 36.08381401180835 38.0 35.0 40.0 30.0 41.0 50 36.01067645915059 38.0 35.0 40.0 30.0 41.0 51 34.876694696592196 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 9.0 10 18.0 11 15.0 12 16.0 13 14.0 14 28.0 15 43.0 16 69.0 17 151.0 18 345.0 19 669.0 20 1383.0 21 2532.0 22 4001.0 23 5290.0 24 6779.0 25 7676.0 26 8855.0 27 10227.0 28 12710.0 29 16025.0 30 20604.0 31 28213.0 32 37286.0 33 52930.0 34 92372.0 35 122358.0 36 106201.0 37 161557.0 38 290735.0 39 363236.0 40 255.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.75018815586551 19.27462771753997 23.471723389437543 9.503460737156976 2 26.80064054319009 34.65712752162129 21.50203829360004 17.040193641588584 3 27.10457325953976 34.35038540531509 23.42536829015483 15.119673044990323 4 25.63185622969654 22.26382927128601 35.554065423531824 16.55024907548562 5 31.60530592147579 24.999297650010867 22.50432869388039 20.89106773463295 6 22.491316736186995 37.75279054740419 24.49345779468018 15.262434921728637 7 68.77485025158916 5.4179278161646955 19.33902212180671 6.468199810439435 8 65.86039352300233 12.106221933724777 12.684884393191789 9.348500150081103 9 61.03443585030925 6.7153530750361154 13.168322980448055 19.081888094206573 10 40.62185328721974 21.87228763523934 21.0345689271493 16.471290150391617 11 31.043573793325752 21.2929597915721 25.80988346904707 21.853582946055088 12 25.516079378856453 18.36430820004702 31.807804513079237 24.31180790801729 13 22.887072472168455 22.801237910338738 37.073359347391175 17.238330270101628 14 18.565476023250003 30.203932864212828 28.680055182529674 22.550535930007495 15 14.568513132466165 23.32371237067519 41.842759363064665 20.265015133793977 16 15.90807939068551 26.836793084735937 28.346475903480844 28.908651621097707 17 16.18088691277996 26.456193322204168 31.24244973761683 26.120470027399044 18 16.746093825086756 25.673110050110825 32.255460216678664 25.325335908123748 19 16.702326331027162 27.82422323787781 28.79413160708028 26.679318824014754 20 19.648130048602617 27.95279025167788 33.50860046044586 18.890479239273635 21 19.757918441640633 32.256199532456705 29.004984466975504 18.980897558927165 22 16.742692972507804 24.521847520556676 30.143456833569672 28.59200267336585 23 17.346344305272357 29.178723674813433 29.511711501239834 23.963220518674376 24 21.81203339932959 23.898900045985442 27.120838206656504 27.168228348028467 25 16.213047149124428 32.91145510652801 24.84293236295673 26.03256538139083 26 15.898690080304481 24.683388018057048 29.606417852405954 29.811504049232518 27 20.523036340327753 28.031157724149452 27.57381698385778 23.871988951665013 28 13.747724755693099 27.611448156959696 32.018953099285675 26.62187398806153 29 18.082111367571542 24.148123394760617 27.177395863676086 30.592369373991758 30 17.572353138617274 27.953233841144698 33.494479529085424 20.979933491152607 31 21.700248853690887 29.966760362619603 22.27351430797825 26.059476475711257 32 20.691748200875054 34.928456412159676 22.789113131578986 21.590682255386284 33 19.131496182912638 25.0241386601528 27.410132470601106 28.43423268633345 34 23.279797013459984 25.905033409680012 25.087941611797117 25.727227965062895 35 15.961901579326366 27.909096689196083 27.940074020295697 28.188927711181854 36 18.284609959174983 26.301898119328527 26.282601977521843 29.13088994397465 37 17.96182469048545 29.017257108890863 32.924245269488 20.096672931135693 38 16.52947430212287 32.342847341642255 25.946065435360882 25.18161292087399 39 23.791329600281532 26.655882513851083 27.377454713212018 22.17533317265537 40 20.61086705475816 23.852766741436135 33.20732928089711 22.32903692290859 41 21.25163203958001 25.801824927066498 23.9067367932326 29.039806240120893 42 18.08425538332784 25.79420997455275 30.429054518624106 25.692480123495308 43 21.56539765577753 22.202392130131408 26.461442464228206 29.77076774986286 44 20.05674987912187 22.132970378574036 30.053112445493944 27.75716729681015 45 19.19448588720111 22.105541763208986 27.162609548115412 31.53736280147449 46 26.395717291561006 24.6034679824516 26.613963309236567 22.386851416750826 47 15.474248892135305 22.488507336230466 38.096572384189884 23.940671387444347 48 19.714964194936872 23.545433172507508 28.47666941199259 28.262933220563035 49 19.538045929253396 18.99302233768692 36.863393666429594 24.605538066630096 50 21.468473357277308 18.50041623478303 31.676132373011423 28.354978034928237 51 18.803683566932474 18.698478931718274 27.436230317565702 35.06160718378355 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1411.0 1 1484.0 2 1557.0 3 2248.0 4 2939.0 5 2189.0 6 1439.0 7 1612.5 8 1786.0 9 1876.0 10 1966.0 11 2034.0 12 2102.0 13 2252.0 14 2402.0 15 2477.5 16 2553.0 17 2753.5 18 2954.0 19 3539.5 20 4125.0 21 3806.0 22 3487.0 23 4022.0 24 4557.0 25 5605.5 26 7019.0 27 7384.0 28 8800.0 29 10216.0 30 12143.5 31 14071.0 32 16802.5 33 19534.0 34 21235.0 35 22936.0 36 25799.5 37 28663.0 38 32970.5 39 37278.0 40 46221.0 41 55164.0 42 69060.0 43 82956.0 44 168055.0 45 253154.0 46 226938.5 47 200723.0 48 189217.5 49 177712.0 50 140995.0 51 104278.0 52 87529.5 53 70781.0 54 62399.0 55 54017.0 56 48052.0 57 42087.0 58 37165.5 59 32244.0 60 31414.5 61 30585.0 62 27272.0 63 23959.0 64 20684.0 65 17409.0 66 14004.5 67 10600.0 68 8917.5 69 7235.0 70 5422.0 71 3609.0 72 3218.5 73 2828.0 74 2197.0 75 1270.0 76 974.0 77 654.0 78 334.0 79 257.5 80 181.0 81 150.0 82 119.0 83 80.0 84 41.0 85 33.0 86 25.0 87 13.5 88 2.0 89 3.0 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1352602.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.945609871496227 #Duplication Level Percentage of deduplicated Percentage of total 1 63.17507215835298 11.968902707157786 2 12.555937052027263 4.7575976991754585 3 6.308052467490217 3.585297032939963 4 3.834227142101964 2.9056708637186293 5 2.5225874269775277 2.389597862912886 6 1.8228662205303021 2.0721187357257547 7 1.3603307611630724 1.8040607128033754 8 0.9939488460295335 1.506477365527953 9 0.7866149838495533 1.341261054277825 >10 4.813129682692972 17.70738786578296 >50 1.1675084007757635 16.313811388135736 >100 0.6337452394953959 17.081716601611276 >500 0.014170701007349304 1.8062983855526342 >1k 0.0074789810872121325 2.677268157439394 >5k 0.0027554140847623645 3.5623327394029243 >10k+ 0.0015745223341499224 8.52020082783547 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGC 36035 2.664124406144601 No Hit GAATCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTC 31453 2.325369916649539 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCG 30948 2.288034469858835 No Hit GCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGC 15813 1.1690800398047616 TruSeq Adapter, Index 15 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGC 8385 0.6199162798812954 TruSeq Adapter, Index 15 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTAATGACT 8255 0.6103051747668568 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCT 8120 0.6003244117634012 No Hit CTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGCT 6737 0.49807703966133426 TruSeq Adapter, Index 14 (95% over 22bp) GAATGATCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTC 5870 0.4339783617058085 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTAATGACTCGTA 5397 0.39900872540481236 No Hit GAACTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCT 5004 0.3699536153280862 No Hit TCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGC 4095 0.3027498111048187 TruSeq Adapter, Index 15 (95% over 21bp) GAATGATCCGGCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGC 3644 0.2694066695154968 No Hit GAATGATCCCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCG 3027 0.22379088601081473 No Hit ACTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGC 2852 0.21085285989522418 TruSeq Adapter, Index 14 (95% over 21bp) ACCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG 1996 0.14756742929553557 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATG 1754 0.12967598746711895 No Hit GCCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG 1674 0.12376146124284895 No Hit AGCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG 1638 0.12109992444192749 No Hit CGCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG 1635 0.12087812970851737 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCTAATGAC 1577 0.11659009819592163 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCC 1467 0.10845762463755045 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTT 1466 0.10838369305974707 No Hit GGCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG 1465 0.1083097614819437 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCTAATGACTCGTAT 1445 0.1068311299258762 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTAATGACTCGT 1422 0.10513070363639858 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4786315560674906E-4 0.0 0.0 0.5263189023822233 0.0 2 1.4786315560674906E-4 0.0 0.0 2.954675506911863 0.0 3 1.4786315560674906E-4 0.0 0.0 3.9306462654942105 0.0 4 1.4786315560674906E-4 0.0 0.0 5.447426515708242 0.0 5 1.4786315560674906E-4 0.0 0.0 10.767542854439073 0.0 6 2.217947334101236E-4 0.0 0.0 12.314265393663472 0.0 7 2.217947334101236E-4 0.0 0.0 14.452662350048277 0.0 8 2.217947334101236E-4 0.0 0.0 16.99147273181616 0.0 9 2.217947334101236E-4 0.0 0.0 17.78268847746787 0.0 10 2.957263112134981E-4 0.0 0.0 22.014236264621818 0.0 11 2.957263112134981E-4 0.0 0.0 24.766117453619025 0.0 12 2.957263112134981E-4 0.0 0.0 29.942658668255703 0.0 13 2.957263112134981E-4 0.0 0.0 30.88661705364919 0.0 14 3.6965788901687267E-4 0.0 0.0 31.3293932731136 0.0 15 3.6965788901687267E-4 0.0 0.0 32.37996099369955 0.0 16 3.6965788901687267E-4 0.0 0.0 33.67871702097143 0.0 17 3.6965788901687267E-4 0.0 0.0 35.13413406160866 0.0 18 3.6965788901687267E-4 0.0 0.0 36.625260054324926 0.0 19 3.6965788901687267E-4 0.0 0.0 38.3708585378404 0.0 20 3.6965788901687267E-4 0.0 0.0 39.38179893272374 0.0 21 3.6965788901687267E-4 0.0 0.0 40.40471624321123 0.0 22 3.6965788901687267E-4 0.0 0.0 41.56130184636722 0.0 23 3.6965788901687267E-4 0.0 0.0 42.52174697361086 0.0 24 3.6965788901687267E-4 0.0 0.0 43.41136564931887 0.0 25 3.6965788901687267E-4 0.0 0.0 44.11024085429417 0.0 26 3.6965788901687267E-4 0.0 0.0 44.761060533697275 0.0 27 3.6965788901687267E-4 0.0 0.0 45.41735114985783 0.0 28 3.6965788901687267E-4 0.0 0.0 46.00680761968413 0.0 29 3.6965788901687267E-4 0.0 0.0 46.62997688898878 0.0 30 3.6965788901687267E-4 0.0 0.0 47.35849865666323 0.0 31 3.6965788901687267E-4 0.0 0.0 48.035416183030925 0.0 32 3.6965788901687267E-4 0.0 0.0 48.64350341046369 0.0 33 3.6965788901687267E-4 0.0 0.0 49.22741501195473 0.0 34 3.6965788901687267E-4 0.0 0.0 49.79705781892974 0.0 35 3.6965788901687267E-4 0.0 0.0 50.41800914090028 0.0 36 3.6965788901687267E-4 0.0 0.0 50.99770664245654 0.0 37 3.6965788901687267E-4 0.0 0.0 51.56882808098761 0.0 38 3.6965788901687267E-4 0.0 0.0 52.15177857196721 0.0 39 3.6965788901687267E-4 0.0 0.0 52.72267821576487 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTC 40 6.8157533E-9 45.000004 25 CTTAACG 20 7.033729E-4 45.000004 1 AACGTAA 25 3.8911723E-5 45.000004 10 CGAACTT 20 7.033729E-4 45.000004 45 ACGTTCA 40 6.8157533E-9 45.000004 26 GACGTAA 20 7.033729E-4 45.000004 1 CGGCACG 25 3.8911723E-5 45.000004 2 CCGGATT 20 7.033729E-4 45.000004 44 ATAGCGC 25 3.8911723E-5 45.000004 12 ACATTCG 25 3.8911723E-5 45.000004 14 GCCGGAT 20 7.033729E-4 45.000004 45 TTCCGTA 20 7.033729E-4 45.000004 38 CGCGATA 20 7.033729E-4 45.000004 11 ATATGCG 20 7.033729E-4 45.000004 2 TGCGGTA 20 7.033729E-4 45.000004 18 TTATCCG 20 7.033729E-4 45.000004 1 CCGTCCG 20 7.033729E-4 45.000004 23 TCGGCCC 25 3.8911723E-5 45.000004 14 TCGGATC 25 3.8911723E-5 45.000004 29 CTAACGG 40 6.8157533E-9 45.000004 2 >>END_MODULE