##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934985.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1221913 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27093500110073 33.0 31.0 34.0 30.0 34.0 2 32.44692461738274 34.0 31.0 34.0 31.0 34.0 3 32.44559555385695 34.0 31.0 34.0 30.0 34.0 4 35.984536542290655 37.0 35.0 37.0 35.0 37.0 5 35.89950593863884 37.0 35.0 37.0 35.0 37.0 6 35.8426917464664 37.0 35.0 37.0 35.0 37.0 7 36.13057476268769 37.0 35.0 37.0 35.0 37.0 8 35.90273611951096 37.0 35.0 37.0 35.0 37.0 9 37.63546831893924 39.0 38.0 39.0 35.0 39.0 10 37.41029598670282 39.0 37.0 39.0 35.0 39.0 11 37.34773097593691 39.0 37.0 39.0 34.0 39.0 12 37.27625371037054 39.0 37.0 39.0 34.0 39.0 13 37.21579932450182 39.0 37.0 39.0 34.0 39.0 14 38.35106263702899 40.0 38.0 41.0 34.0 41.0 15 38.40756665981948 40.0 38.0 41.0 34.0 41.0 16 38.47617874595 40.0 38.0 41.0 34.0 41.0 17 38.4854265401874 40.0 38.0 41.0 34.0 41.0 18 38.49596084172932 40.0 38.0 41.0 34.0 41.0 19 38.497451127862625 40.0 38.0 41.0 34.0 41.0 20 38.468787057671044 40.0 38.0 41.0 34.0 41.0 21 38.3998893538247 40.0 37.0 41.0 34.0 41.0 22 38.34857882680682 40.0 37.0 41.0 34.0 41.0 23 38.1457583314033 40.0 37.0 41.0 34.0 41.0 24 37.904436731584 40.0 36.0 41.0 33.0 41.0 25 37.880325358679386 40.0 36.0 41.0 33.0 41.0 26 38.06232685960457 40.0 37.0 41.0 34.0 41.0 27 38.11110119951257 40.0 37.0 41.0 34.0 41.0 28 38.087994808141005 40.0 37.0 41.0 34.0 41.0 29 38.12852469856692 40.0 37.0 41.0 34.0 41.0 30 38.04257586260233 40.0 37.0 41.0 34.0 41.0 31 37.93603881782091 40.0 37.0 41.0 34.0 41.0 32 37.87837104605647 40.0 37.0 41.0 34.0 41.0 33 37.82594914695236 40.0 37.0 41.0 33.0 41.0 34 37.715474014925775 40.0 36.0 41.0 33.0 41.0 35 37.66903863040986 40.0 36.0 41.0 33.0 41.0 36 37.646752264686604 40.0 36.0 41.0 33.0 41.0 37 37.5839924773695 40.0 36.0 41.0 33.0 41.0 38 37.505433692906124 40.0 36.0 41.0 33.0 41.0 39 37.48486839897767 40.0 36.0 41.0 33.0 41.0 40 37.43415693261304 40.0 36.0 41.0 33.0 41.0 41 37.37334654758563 40.0 36.0 41.0 33.0 41.0 42 37.38541369148213 40.0 36.0 41.0 33.0 41.0 43 37.30757590761372 39.0 35.0 41.0 33.0 41.0 44 37.193429483113775 39.0 35.0 41.0 33.0 41.0 45 37.202007016866176 39.0 35.0 41.0 33.0 41.0 46 37.085361232755524 39.0 35.0 41.0 32.0 41.0 47 37.032464668106485 39.0 35.0 41.0 32.0 41.0 48 36.99632297880455 39.0 35.0 41.0 32.0 41.0 49 36.9606346769369 39.0 35.0 41.0 32.0 41.0 50 36.89622419926787 39.0 35.0 41.0 32.0 41.0 51 35.90202575797131 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 9.0 10 11.0 11 10.0 12 15.0 13 24.0 14 22.0 15 35.0 16 63.0 17 110.0 18 231.0 19 416.0 20 717.0 21 1213.0 22 1893.0 23 2669.0 24 3715.0 25 4626.0 26 5927.0 27 7174.0 28 8401.0 29 10732.0 30 13878.0 31 18105.0 32 24796.0 33 35465.0 34 67402.0 35 93910.0 36 87369.0 37 138389.0 38 266062.0 39 428215.0 40 301.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.628669962591445 22.876587776707506 25.44968422465429 11.045058036046756 2 31.013828316745958 24.390770865028852 26.598374843380828 17.997025974844362 3 30.634095880803297 23.69906859162641 27.97449572923768 17.692339798332615 4 29.402093275053133 25.164803058810243 26.14686970348953 19.286233962647096 5 24.87779408190272 29.266649916974448 25.495022968083653 20.36053303303918 6 26.101121765624885 32.497239983534016 24.99523288482895 16.406405366012148 7 80.02222744172457 5.559724792190606 8.562393558297522 5.855654207787298 8 79.80363577439637 4.295968698262478 8.773865242451794 7.12653028488935 9 74.18195894470392 6.797619797808846 11.484205503992511 7.536215753494726 10 38.335626186152375 28.45685412954932 18.828018034017152 14.379501650281156 11 26.739383245779365 26.137458231478018 26.22011550740519 20.903043015337424 12 25.370136826435267 22.494236496379038 31.237084800636378 20.898541876549313 13 23.12660557666544 24.6539647258029 32.344283103625216 19.87514659390644 14 18.292709873779884 29.34914351512751 30.325399598825776 22.03274701226683 15 17.14246431619927 27.537803427903622 35.034982032272346 20.28475022362476 16 19.544026456875407 27.704591079724988 30.526968777646204 22.224413685753404 17 19.422577548483403 27.109867887484622 29.027189333446817 24.440365230585158 18 20.207248797582153 27.083515765852397 30.8019474381564 21.907287998409053 19 20.833970994661648 27.00724192311564 28.804587560652845 23.354199521569864 20 22.510031401580964 28.60760135950759 28.252911623004255 20.62945561590719 21 21.634027954527042 27.5957453599397 30.214344229089964 20.555882456443296 22 19.858124105398666 25.989739040340844 28.363885153853012 25.78825170040748 23 19.90632720987501 25.59134733814928 29.516422200271215 24.9859032517045 24 21.33130591130465 24.892688759347024 29.66610552469775 24.109899804650574 25 19.243104869168263 28.103064620803607 27.33165127140803 25.322179238620095 26 18.56736117874186 28.014351267234243 29.299958344006487 24.118329210017407 27 19.670385698490808 27.569638754968643 28.521425011436985 24.238550535103563 28 17.002683497106585 28.04004867777002 29.887479714185872 25.069788110937523 29 18.663194515485145 24.714607341111847 31.70111129024734 24.921086853155668 30 20.93021352584022 25.683825280523244 28.20405380743146 25.181907386205072 31 19.51186377426216 29.28637308875509 26.33395339930093 24.867809737681814 32 20.624217927135565 28.360775276144867 27.424129213781995 23.590877582937576 33 22.50798542940455 26.09522936575681 25.499033073549427 25.897752131289213 34 19.348677033471287 25.88097515944261 28.348090248651094 26.422257558435014 35 18.29860227364796 25.95389360781005 28.269606755963807 27.477897362578187 36 20.489592957927446 26.88612037027186 26.524801683916937 26.099484987883752 37 19.67660545390711 27.134746909149833 28.911550986035834 24.277096650907225 38 19.29916450680204 28.33016753238569 27.65417832529812 24.71648963551415 39 22.43007480892666 23.96193509685223 28.868749248105225 24.739240846115884 40 22.206409130600953 23.803085817075356 29.466173123618454 24.524331928705234 41 18.577100006301595 26.797488855589556 26.050217977875672 28.575193160233177 42 20.02663037384822 24.86003504341144 28.296695427579543 26.8166391551608 43 21.92758404239909 23.781398512005357 28.646147475311253 25.6448699702843 44 20.33393539474578 24.321289649917794 28.39915771417441 26.94561724116201 45 20.818667122782063 23.180864758783972 27.859266576261977 28.14120154217199 46 22.56167173931368 24.27554171205315 28.139319247769684 25.023467300863484 47 17.948741031480964 24.975673390822422 31.03805262731471 26.0375329503819 48 18.62693988851907 23.106964243771856 30.544727816137485 27.721368051571595 49 20.903534048659765 21.298897712030236 32.07544235964426 25.722125879665736 50 20.033914034796258 21.443834381007488 30.914148552311005 27.60810303188525 51 18.895207760290624 21.45815618624239 28.177619846912176 31.469016206554805 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 877.0 1 1086.5 2 1296.0 3 1846.5 4 2397.0 5 1836.5 6 1276.0 7 1357.5 8 1439.0 9 1584.5 10 1730.0 11 1794.5 12 1859.0 13 1883.0 14 1907.0 15 2003.5 16 2100.0 17 2367.0 18 2634.0 19 2670.5 20 2707.0 21 2941.0 22 3175.0 23 3550.5 24 3926.0 25 5187.5 26 7192.5 27 7936.0 28 11074.5 29 14213.0 30 17224.5 31 20236.0 32 22757.5 33 25279.0 34 28190.5 35 31102.0 36 32856.0 37 34610.0 38 39235.5 39 43861.0 40 50662.5 41 57464.0 42 65438.0 43 73412.0 44 82750.5 45 92089.0 46 105739.5 47 119390.0 48 136841.0 49 154292.0 50 152247.0 51 150202.0 52 123264.0 53 96326.0 54 81276.0 55 66226.0 56 56684.5 57 47143.0 58 42876.0 59 38609.0 60 35669.5 61 32730.0 62 29840.0 63 26950.0 64 22973.0 65 18996.0 66 16051.0 67 13106.0 68 10914.0 69 8722.0 70 7715.0 71 6708.0 72 5194.0 73 3680.0 74 3046.5 75 1698.0 76 983.0 77 828.0 78 673.0 79 513.0 80 353.0 81 311.5 82 270.0 83 189.0 84 108.0 85 70.5 86 33.0 87 20.5 88 8.0 89 7.5 90 7.0 91 5.0 92 3.0 93 3.5 94 4.0 95 3.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1221913.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.92793081503154 #Duplication Level Percentage of deduplicated Percentage of total 1 64.33422084411856 14.107163437087916 2 13.440589866723087 5.894486494214357 3 6.26585260464636 4.121915472356116 4 3.529787749384304 3.0960376624097967 5 2.2118513450251425 2.425066163342289 6 1.5160459409420262 1.9946250303231685 7 1.0579228489470565 1.6238641327546481 8 0.7925896033368759 1.3903879989347443 9 0.587001644535072 1.1584558304707318 >10 4.196471136258333 19.984077649103824 >50 1.4853102212976295 23.56247327639658 >100 0.5702866363444397 16.781870537575934 >500 0.006789126623146827 0.9218454036626978 >1k 0.004526084415431219 1.7897662421730471 >5k 7.543474025718698E-4 1.1479646691941725 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 7332 0.6000427198990436 TruSeq Adapter, Index 13 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 6548 0.5358810324466635 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGCT 4976 0.4072303019936771 TruSeq Adapter, Index 16 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 3075 0.25165457769906696 TruSeq Adapter, Index 13 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 2328 0.19052092906778142 TruSeq Adapter, Index 16 (95% over 21bp) ACCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTG 1498 0.1225946528107975 No Hit AGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTG 1395 0.11416524744396696 No Hit GGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTG 1382 0.11310134191223106 No Hit GCCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTG 1335 0.10925491422057053 No Hit CGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTG 1302 0.1065542309477025 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCC 1292 0.10573584207713642 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4238435960661684 0.0 2 0.0 0.0 0.0 2.081326575623633 0.0 3 8.183888705660714E-5 0.0 0.0 2.931632612141781 0.0 4 8.183888705660714E-5 0.0 0.0 3.9216376288655574 0.0 5 8.183888705660714E-5 0.0 0.0 6.4497226889312085 0.0 6 8.183888705660714E-5 0.0 0.0 7.733365632414092 0.0 7 8.183888705660714E-5 0.0 0.0 9.073886602401316 0.0 8 8.183888705660714E-5 0.0 0.0 10.993745053862263 0.0 9 8.183888705660714E-5 0.0 0.0 11.676854244123763 0.0 10 8.183888705660714E-5 0.0 0.0 13.24357789793545 0.0 11 8.183888705660714E-5 0.0 0.0 15.670264576937965 0.0 12 8.183888705660714E-5 0.0 0.0 17.538891885101478 0.0 13 8.183888705660714E-5 0.0 0.0 18.232721969567393 0.0 14 8.183888705660714E-5 0.0 0.0 18.51662106876676 0.0 15 8.183888705660714E-5 0.0 0.0 19.04677337911946 0.0 16 8.183888705660714E-5 0.0 0.0 20.169521070649058 0.0 17 8.183888705660714E-5 0.0 0.0 21.523136262565338 0.0 18 8.183888705660714E-5 0.0 0.0 22.998200362873625 0.0 19 8.183888705660714E-5 0.0 0.0 23.89441801503053 0.0 20 8.183888705660714E-5 0.0 0.0 24.75045277364264 0.0 21 8.183888705660714E-5 0.0 0.0 25.78792434485925 0.0 22 8.183888705660714E-5 0.0 0.0 26.881619231483747 0.0 23 8.183888705660714E-5 0.0 0.0 27.884636631249524 0.0 24 8.183888705660714E-5 0.0 0.0 28.704171246234388 0.0 25 8.183888705660714E-5 0.0 0.0 29.365183936990604 0.0 26 8.183888705660714E-5 0.0 0.0 29.963835395809685 0.0 27 8.183888705660714E-5 0.0 0.0 30.565678571223973 0.0 28 8.183888705660714E-5 0.0 0.0 31.15385465249981 0.0 29 1.6367777411321427E-4 0.0 0.0 31.787369477205004 0.0 30 2.455166611698214E-4 0.0 0.0 32.511725466543034 0.0 31 3.2735554822642854E-4 0.0 0.0 33.168073340737024 0.0 32 3.2735554822642854E-4 0.0 0.0 33.7722080049889 0.0 33 3.2735554822642854E-4 0.0 0.0 34.35236387533319 0.0 34 3.2735554822642854E-4 0.0 0.0 34.924008501423586 0.0 35 4.091944352830357E-4 0.0 0.0 35.5435288764421 0.0 36 4.091944352830357E-4 0.0 0.0 36.132032313266166 0.0 37 4.091944352830357E-4 0.0 0.0 36.71709851683385 0.0 38 4.091944352830357E-4 0.0 0.0 37.28833394848897 0.0 39 4.091944352830357E-4 0.0 0.0 37.85948754125703 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCCG 30 2.1656142E-6 45.000004 37 GTATGCG 30 2.1656142E-6 45.000004 1 TATTCGA 30 2.1656142E-6 45.000004 24 CGGGTCG 35 1.2120108E-7 45.0 6 GTCGACT 25 3.8909508E-5 45.0 30 TAGAACG 35 1.2120108E-7 45.0 14 GACCGAA 25 3.8909508E-5 45.0 9 CGCCTAG 20 7.033462E-4 45.0 37 TACGCTA 20 7.033462E-4 45.0 17 ACTACGC 20 7.033462E-4 45.0 15 ACGTCAA 35 1.2120108E-7 45.0 36 CGTAAGT 20 7.033462E-4 45.0 14 ATGCGAT 20 7.033462E-4 45.0 42 ATACGAC 20 7.033462E-4 45.0 28 ATCGCTA 20 7.033462E-4 45.0 12 TCGAATC 25 3.8909508E-5 45.0 11 ATCGCAA 20 7.033462E-4 45.0 15 ACGACTC 20 7.033462E-4 45.0 12 TGGTACG 75 0.0 45.0 1 CGTAAGG 90 0.0 44.999996 2 >>END_MODULE