##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934984.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1930497 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.339066571976026 33.0 31.0 34.0 30.0 34.0 2 32.510447827683755 34.0 31.0 34.0 31.0 34.0 3 32.51022664111884 34.0 31.0 34.0 31.0 34.0 4 36.0257586517876 37.0 35.0 37.0 35.0 37.0 5 35.95394346637161 37.0 35.0 37.0 35.0 37.0 6 35.893140989082085 37.0 35.0 37.0 35.0 37.0 7 36.18185109844771 37.0 35.0 37.0 35.0 37.0 8 35.95613875597838 37.0 36.0 37.0 35.0 37.0 9 37.729568603318214 39.0 38.0 39.0 35.0 39.0 10 37.47875857874941 39.0 37.0 39.0 35.0 39.0 11 37.40617882338071 39.0 37.0 39.0 35.0 39.0 12 37.37235333699042 39.0 37.0 39.0 35.0 39.0 13 37.334332557885354 39.0 37.0 39.0 34.0 39.0 14 38.53388013552986 40.0 38.0 41.0 34.0 41.0 15 38.55914202404873 40.0 38.0 41.0 34.0 41.0 16 38.61984504508425 40.0 38.0 41.0 35.0 41.0 17 38.63024702965092 40.0 38.0 41.0 35.0 41.0 18 38.63636514327658 40.0 38.0 41.0 35.0 41.0 19 38.616707511070985 40.0 38.0 41.0 35.0 41.0 20 38.5891275666318 40.0 38.0 41.0 35.0 41.0 21 38.54656236192027 40.0 38.0 41.0 34.0 41.0 22 38.49271405239169 40.0 38.0 41.0 34.0 41.0 23 38.292446970909566 40.0 37.0 41.0 34.0 41.0 24 38.09173440828968 40.0 37.0 41.0 34.0 41.0 25 38.06895581811316 40.0 37.0 41.0 34.0 41.0 26 38.24955438936191 40.0 37.0 41.0 34.0 41.0 27 38.26449561952181 40.0 37.0 41.0 34.0 41.0 28 38.2701226678933 40.0 37.0 41.0 34.0 41.0 29 38.33000206682528 40.0 37.0 41.0 34.0 41.0 30 38.22185219661051 40.0 37.0 41.0 34.0 41.0 31 38.1768637817101 40.0 37.0 41.0 34.0 41.0 32 38.07019746728433 40.0 37.0 41.0 34.0 41.0 33 37.98641282529836 40.0 37.0 41.0 34.0 41.0 34 37.94889709748319 40.0 37.0 41.0 34.0 41.0 35 37.851231056044114 40.0 37.0 41.0 34.0 41.0 36 37.7855971804152 40.0 37.0 41.0 33.0 41.0 37 37.76469375502785 40.0 37.0 41.0 33.0 41.0 38 37.68983064982748 40.0 37.0 41.0 33.0 41.0 39 37.67957474163389 40.0 36.0 41.0 33.0 41.0 40 37.64168087285295 40.0 36.0 41.0 33.0 41.0 41 37.57144507347072 40.0 36.0 41.0 33.0 41.0 42 37.56104516090934 40.0 36.0 41.0 33.0 41.0 43 37.515244519934505 40.0 36.0 41.0 33.0 41.0 44 37.45288493066811 40.0 36.0 41.0 33.0 41.0 45 37.44973289261781 40.0 36.0 41.0 33.0 41.0 46 37.34072832022013 39.0 36.0 41.0 33.0 41.0 47 37.26703952401895 39.0 35.0 41.0 33.0 41.0 48 37.222792369011714 39.0 35.0 41.0 33.0 41.0 49 37.19127198850866 39.0 35.0 41.0 33.0 41.0 50 37.13737602285836 39.0 35.0 41.0 33.0 41.0 51 36.10699265525924 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 17.0 10 23.0 11 21.0 12 18.0 13 26.0 14 36.0 15 40.0 16 74.0 17 153.0 18 282.0 19 517.0 20 947.0 21 1608.0 22 2672.0 23 3797.0 24 5166.0 25 6681.0 26 8194.0 27 10154.0 28 12340.0 29 15614.0 30 19935.0 31 26369.0 32 36298.0 33 52268.0 34 97463.0 35 140515.0 36 128263.0 37 211231.0 38 422105.0 39 727019.0 40 643.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.66849106732619 21.49772830519809 26.843916359362378 10.98986426811334 2 30.193053913059693 26.143992971758053 25.96911572512156 17.693837390060693 3 30.620819405572764 25.215320199927792 27.42252383712588 16.741336557373568 4 28.30115768115672 25.379267618649497 27.491625213610792 18.82794948658299 5 25.809312316983657 29.25619672032642 25.55150305853881 19.382987904151108 6 25.61024440856422 34.21688818993244 24.592475409182196 15.580391992321148 7 80.77655650332531 4.992341350439809 9.05072631555501 5.180375830679871 8 81.66472157169889 4.500343693877794 7.73137694593672 6.103557788486592 9 76.35743541689006 6.416223387034531 9.876627624906954 7.3497135711684605 10 37.4849585365841 30.17269646106676 17.781690414437318 14.560654587911817 11 25.13368319142687 26.29250395105509 27.924674319618216 20.649138537899823 12 23.556317362834545 23.216922896021078 31.595076293824853 21.631683447319524 13 22.244530812531696 24.73606537591097 33.13566402848593 19.883739783071405 14 19.109483205620105 28.85091248523049 29.80310251712383 22.236501792025575 15 16.683579409861814 27.881317608885176 34.80870470143181 20.626398279821206 16 19.742532622428318 27.749175471394157 30.299917585989515 22.208374320188014 17 20.069909458548757 26.90861472460201 28.13073524589782 24.89074057095142 18 19.83463325765334 26.539020780659072 31.673087293064945 21.953258668622638 19 19.82033642113922 28.156117310723612 29.515767183269386 22.50777908486778 20 21.71544426124464 28.526177455857223 29.79590229873447 19.962475984163664 21 21.26022469861388 28.306803895577147 30.439674342928274 19.9932970628807 22 20.148438459111826 25.53839762506753 29.312762464795334 25.000401451025304 23 18.23737617825876 27.61672253310935 29.81465394662618 24.33124734200571 24 20.26804496458684 25.844329206416795 30.104061285772527 23.783564543223843 25 18.554082187125907 29.023873126971967 28.376837674443422 24.045207011458707 26 18.717356204127743 28.486135953591223 29.060651220903218 23.73585662137781 27 20.31140167531988 29.002376072068486 28.59885304147067 22.087369211140963 28 16.36107178617734 27.33187360560519 30.539285997336435 25.76776861088103 29 17.770397985596457 25.28794398540894 31.077023170717176 25.86463485827743 30 19.767034085005054 29.183728335242172 28.319961129180726 22.729276450572055 31 20.605315625976107 28.44733765450037 25.70048023902653 25.246866480496994 32 19.682030067904794 28.574973180481507 27.052204691330783 24.69079206028292 33 20.172214719836397 30.393106023992782 25.707732257548187 23.726946998622633 34 20.354447585259134 25.505867141984677 29.122604179131073 25.017081093625116 35 17.48420225465256 27.112707245854306 30.033820306377063 25.369270193116073 36 19.146727500742035 30.58958392579735 28.56647795878471 21.69721061467591 37 19.447634469258436 27.469610157384345 29.822682967132298 23.260072406224925 38 17.81510149976923 28.83112483469283 27.248837993532238 26.10493567200571 39 21.075453626708562 27.474168569026524 27.989269084593243 23.46110871967167 40 21.746731541152357 25.594341767948876 30.842834772600007 21.81609191829876 41 20.243077300819426 26.976213897250297 28.699189897731 24.08151890419928 42 19.184696997716134 26.133788345695436 31.134262316905957 23.547252339682476 43 20.266439160485618 26.382273580326725 29.05117179669277 24.300115462494894 44 19.4547310873832 25.21832460760105 27.744565259619673 27.58237904539608 45 20.14201524270693 24.187657375276935 28.196832214709477 27.473495167306655 46 22.63867801918366 25.683541595765234 28.404395344825712 23.273385040225392 47 18.038878071294594 25.95968810104341 32.32986117046543 23.671572657196567 48 18.290937515054413 24.83660943270049 30.616364594195172 26.25608845804992 49 19.82934964415899 23.500528620350096 32.92903330075105 23.74108843473986 50 20.09384111967022 23.069499719502286 30.823979524443708 26.01267963638379 51 18.854678354848517 22.732695259303693 28.42796440502109 29.9846619808267 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 861.0 1 1220.0 2 1579.0 3 2698.5 4 3818.0 5 2793.5 6 1769.0 7 1899.5 8 2030.0 9 2187.5 10 2345.0 11 2479.0 12 2613.0 13 2758.5 14 2904.0 15 3122.5 16 3341.0 17 3437.0 18 3533.0 19 3680.5 20 3828.0 21 5152.5 22 6477.0 23 6600.0 24 6723.0 25 8459.5 26 13616.0 27 17036.0 28 21578.5 29 26121.0 30 29009.0 31 31897.0 32 35876.0 33 39855.0 34 46130.0 35 52405.0 36 59068.5 37 65732.0 38 71906.0 39 78080.0 40 89377.5 41 100675.0 42 118956.5 43 137238.0 44 175538.5 45 213839.0 46 234277.0 47 254715.0 48 247464.5 49 240214.0 50 204450.0 51 168686.0 52 140813.0 53 112940.0 54 99574.5 55 86209.0 56 78915.0 57 71621.0 58 62567.0 59 53513.0 60 47360.5 61 41208.0 62 35785.0 63 30362.0 64 26406.0 65 22450.0 66 18061.5 67 13673.0 68 10990.5 69 8308.0 70 6500.0 71 4692.0 72 3999.0 73 3306.0 74 2487.5 75 1425.0 76 1181.0 77 788.0 78 395.0 79 307.5 80 220.0 81 181.5 82 143.0 83 88.5 84 34.0 85 31.5 86 29.0 87 24.5 88 20.0 89 15.0 90 10.0 91 5.5 92 1.0 93 1.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1930497.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.8264243036892 #Duplication Level Percentage of deduplicated Percentage of total 1 62.23080320909234 12.338143091828483 2 13.499607625979706 5.352978974519843 3 6.66882393119664 3.9665679859950362 4 3.8456156320875916 3.049792289226741 5 2.455848046656295 2.434534269919701 6 1.6726225021933865 1.989727405703064 7 1.2291718674991623 1.7059058091037502 8 0.9152539781222244 1.4516970972712555 9 0.7141897112491945 1.2743845423700222 >10 4.535176450233322 18.47455872650246 >50 1.4096138954122133 20.59969800081422 >100 0.8060940968572523 21.970902833682644 >500 0.01083601831156523 1.5169240470937353 >1k 0.004757276331906686 1.5364168014382333 >5k 0.0013214656477518573 1.7591162798363948 >10k+ 2.642931295503715E-4 0.5786518446943286 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 11043 0.5720288609617109 TruSeq Adapter, Index 21 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 9418 0.4878536459782118 TruSeq Adapter, Index 21 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGCT 6642 0.34405647872024664 TruSeq Adapter, Index 15 (95% over 24bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGC 6369 0.3299150426030188 No Hit GAATCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTC 5945 0.30795178650886273 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCG 5197 0.26920528755030443 No Hit TCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 3783 0.19595990048158585 TruSeq Adapter, Index 21 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 2441 0.12644412293829 TruSeq Adapter, Index 15 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.36187572423059966 0.0 2 0.0 0.0 0.0 1.8208264503907543 0.0 3 5.180013229753789E-5 0.0 0.0 2.520646237730491 0.0 4 5.180013229753789E-5 0.0 0.0 3.430670961933637 0.0 5 5.180013229753789E-5 0.0 0.0 5.908530290386362 0.0 6 5.180013229753789E-5 0.0 0.0 7.039948780029184 0.0 7 5.180013229753789E-5 0.0 0.0 8.28449875860983 0.0 8 5.180013229753789E-5 0.0 0.0 10.08248135065737 0.0 9 5.180013229753789E-5 0.0 0.0 10.700974930289972 0.0 10 5.180013229753789E-5 0.0 0.0 12.448037992289033 0.0 11 5.180013229753789E-5 0.0 0.0 14.772154528082664 0.0 12 5.180013229753789E-5 0.0 0.0 16.911189191177193 0.0 13 5.180013229753789E-5 0.0 0.0 17.58914932268737 0.0 14 5.180013229753789E-5 0.0 0.0 17.843384372003687 0.0 15 5.180013229753789E-5 0.0 0.0 18.364493702916917 0.0 16 5.180013229753789E-5 0.0 0.0 19.397750941855904 0.0 17 5.180013229753789E-5 0.0 0.0 20.721347922322593 0.0 18 5.180013229753789E-5 0.0 0.0 22.124147305072217 0.0 19 5.180013229753789E-5 0.0 0.0 23.105293610919883 0.0 20 5.180013229753789E-5 0.0 0.0 23.933992127415895 0.0 21 5.180013229753789E-5 0.0 0.0 24.96999477336665 0.0 22 5.180013229753789E-5 0.0 0.0 26.058729953996302 0.0 23 5.180013229753789E-5 0.0 0.0 27.099291011589244 0.0 24 5.180013229753789E-5 0.0 0.0 27.93612214885597 0.0 25 5.180013229753789E-5 0.0 0.0 28.676553239916974 0.0 26 5.180013229753789E-5 0.0 0.0 29.36337119405003 0.0 27 5.180013229753789E-5 0.0 0.0 30.003206428189216 0.0 28 5.180013229753789E-5 0.0 0.0 30.655059293021434 0.0 29 5.180013229753789E-5 0.0 0.0 31.359437492003355 0.0 30 5.180013229753789E-5 0.0 0.0 32.14700670345512 0.0 31 1.0360026459507577E-4 0.0 0.0 32.87583456488148 0.0 32 1.0360026459507577E-4 0.0 0.0 33.52680682746464 0.0 33 1.0360026459507577E-4 0.0 0.0 34.138203788972476 0.0 34 1.0360026459507577E-4 0.0 0.0 34.769647401679464 0.0 35 1.0360026459507577E-4 0.0 0.0 35.44232391969529 0.0 36 1.0360026459507577E-4 0.0 0.0 36.076305738884855 0.0 37 1.0360026459507577E-4 0.0 0.0 36.69226111203488 0.0 38 1.0360026459507577E-4 0.0 0.0 37.316193705558725 0.0 39 1.0360026459507577E-4 0.0 0.0 37.93986729842108 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCGT 30 2.1662709E-6 45.000004 42 CCGTACA 30 2.1662709E-6 45.000004 15 CGGAAAT 25 3.8917948E-5 45.0 32 ACGTTCA 20 7.03448E-4 45.0 15 CGGCATA 25 3.8917948E-5 45.0 6 CACGATA 25 3.8917948E-5 45.0 10 TACGACG 55 1.8189894E-12 45.0 1 GTCGTGC 55 1.8189894E-12 45.0 22 CGTGTCG 20 7.03448E-4 45.0 2 TCGAGTA 25 3.8917948E-5 45.0 21 ACCCGGT 25 3.8917948E-5 45.0 29 CGGTCAA 20 7.03448E-4 45.0 45 TACGTTG 20 7.03448E-4 45.0 1 TAATCGC 25 3.8917948E-5 45.0 30 CGTCATA 70 0.0 41.785713 38 TCGCGTC 65 0.0 41.538464 18 CGCGTCG 60 3.6379788E-12 41.250004 19 CGTAAGG 180 0.0 41.25 2 TCGATAG 115 0.0 41.08696 1 CCGCTCG 55 6.184564E-11 40.909092 19 >>END_MODULE