SRR2934982.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934982.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1599204
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC	5689	0.3557394803914948	No Hit
CCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC	5293	0.33097716113766595	No Hit
CTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGCT	3764	0.2353670951298271	No Hit
TCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC	2260	0.1413203068526592	No Hit
ACTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC	1763	0.11024234556691954	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGAT	20	7.034115E-4	45.000004	4
ATAATCG	30	2.1660362E-6	45.000004	2
TTCGTAA	20	7.034115E-4	45.000004	18
TATCTCG	20	7.034115E-4	45.000004	1
CGTAGAC	20	7.034115E-4	45.000004	33
CATACCG	30	2.1660362E-6	45.000004	28
TCCGTAG	20	7.034115E-4	45.000004	29
TCGTAAG	20	7.034115E-4	45.000004	19
CGTAAGC	20	7.034115E-4	45.000004	20
ATACGTT	20	7.034115E-4	45.000004	26
CGGTACG	30	2.1660362E-6	45.000004	14
TATCGTG	20	7.034115E-4	45.000004	17
CGATACC	30	2.1660362E-6	45.000004	41
CCGTTGA	20	7.034115E-4	45.000004	11
ATCGCAC	20	7.034115E-4	45.000004	11
TAGTACG	60	0.0	45.000004	1
TCTATCG	20	7.034115E-4	45.000004	12
ACGTTGC	25	3.8914928E-5	45.0	37
TAAGTCG	35	1.21232E-7	45.0	1
CGCGACT	25	3.8914928E-5	45.0	16