##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934981.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 965107 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1814182261656 33.0 31.0 34.0 30.0 34.0 2 32.36555117722698 34.0 31.0 34.0 30.0 34.0 3 32.37115262867226 34.0 31.0 34.0 30.0 34.0 4 35.917706534094144 37.0 35.0 37.0 35.0 37.0 5 35.840293356073474 37.0 35.0 37.0 35.0 37.0 6 35.77785675577941 37.0 35.0 37.0 35.0 37.0 7 36.09756949229464 37.0 35.0 37.0 35.0 37.0 8 35.86064343124649 37.0 35.0 37.0 35.0 37.0 9 37.57723858598062 39.0 38.0 39.0 35.0 39.0 10 37.37240533951158 39.0 37.0 39.0 34.0 39.0 11 37.30479832806103 39.0 37.0 39.0 34.0 39.0 12 37.22190285636722 39.0 37.0 39.0 34.0 39.0 13 37.14449796758287 39.0 37.0 39.0 33.0 39.0 14 38.2018014582839 40.0 37.0 41.0 33.0 41.0 15 38.28710806159317 40.0 37.0 41.0 34.0 41.0 16 38.35587349381986 40.0 37.0 41.0 34.0 41.0 17 38.37021594496776 40.0 37.0 41.0 34.0 41.0 18 38.38609294098996 40.0 37.0 41.0 34.0 41.0 19 38.39071004562189 40.0 37.0 41.0 34.0 41.0 20 38.344552469311694 40.0 37.0 41.0 34.0 41.0 21 38.2723480401655 40.0 37.0 41.0 34.0 41.0 22 38.19252165822028 40.0 37.0 41.0 34.0 41.0 23 37.98227243196868 40.0 36.0 41.0 34.0 41.0 24 37.74874288550389 39.0 36.0 41.0 33.0 41.0 25 37.72305765060247 39.0 36.0 41.0 33.0 41.0 26 37.9062653156593 40.0 36.0 41.0 34.0 41.0 27 37.97035665475434 40.0 37.0 41.0 34.0 41.0 28 37.98856603464694 40.0 37.0 41.0 34.0 41.0 29 38.05630878234227 40.0 37.0 41.0 34.0 41.0 30 37.953670422036105 40.0 36.0 41.0 34.0 41.0 31 37.83221238681307 40.0 36.0 41.0 34.0 41.0 32 37.778285723759126 40.0 36.0 41.0 34.0 41.0 33 37.68922927716823 40.0 36.0 41.0 33.0 41.0 34 37.58217689852006 40.0 36.0 41.0 33.0 41.0 35 37.55016179553148 40.0 36.0 41.0 33.0 41.0 36 37.445597223934755 40.0 36.0 41.0 33.0 41.0 37 37.36307994864818 40.0 35.0 41.0 33.0 41.0 38 37.3201458491131 40.0 35.0 41.0 33.0 41.0 39 37.26060944537756 39.0 35.0 41.0 33.0 41.0 40 37.21301472271986 39.0 35.0 41.0 33.0 41.0 41 37.14307636355347 39.0 35.0 41.0 32.0 41.0 42 37.171033885361936 39.0 35.0 41.0 33.0 41.0 43 37.09678512330757 39.0 35.0 41.0 32.0 41.0 44 36.97259889317972 39.0 35.0 41.0 32.0 41.0 45 36.987938124995466 39.0 35.0 41.0 32.0 41.0 46 36.865677070003635 39.0 35.0 41.0 32.0 41.0 47 36.758212301848395 39.0 35.0 41.0 31.0 41.0 48 36.731822481859524 39.0 35.0 41.0 31.0 41.0 49 36.71101857099783 39.0 35.0 41.0 31.0 41.0 50 36.62648079435752 39.0 35.0 41.0 31.0 41.0 51 35.53963861001941 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 9.0 11 14.0 12 10.0 13 8.0 14 17.0 15 28.0 16 44.0 17 88.0 18 182.0 19 372.0 20 639.0 21 1048.0 22 1679.0 23 2491.0 24 3449.0 25 4223.0 26 5214.0 27 6026.0 28 7341.0 29 9383.0 30 11725.0 31 15589.0 32 21059.0 33 29609.0 34 54715.0 35 81342.0 36 69876.0 37 108784.0 38 213953.0 39 315943.0 40 235.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.32507690857076 23.698926647511623 25.519346559500654 12.456649884416962 2 30.578371102893254 25.455312208905333 25.45997490433703 18.50634178386438 3 30.26752474078004 25.141771844987137 27.756922289445622 16.8337811247872 4 28.775462202636596 25.78035388822172 26.839200213033376 18.604983696108306 5 24.248295784819714 28.63454518514527 25.429097499033787 21.688061531001228 6 25.62575963079741 32.36832807139519 24.891644138940034 17.11426815886736 7 78.13485965804828 5.578137968121669 10.136492637603913 6.150509736226139 8 77.05466854970486 4.69647406971455 9.937654581305493 8.311202799275106 9 70.77526118865578 7.372861247509343 13.22703078518755 8.624846778647342 10 35.73261824854653 30.772028386489787 19.475146279117237 14.02020708584644 11 25.103330511539134 23.604118507067092 30.21872186192826 21.073829119465508 12 23.560496400917206 21.03808178782249 35.046373096454595 20.355048714805715 13 22.543199873174686 25.153791237655515 33.705174659390096 18.597834229779703 14 16.827771428453012 30.648518765276805 30.95376989287198 21.569939913398205 15 14.864051343529786 27.379554805840183 37.87300268260411 19.88339116802593 16 16.557335093414512 28.58512061356927 32.816879371924564 22.04066492109165 17 17.31953037331612 27.39789474120486 28.670499747696372 26.612075137782647 18 17.039250570144034 26.23170280601011 33.44385648430692 23.285190139538933 19 18.941526690822883 27.616626964678524 29.962066382276788 23.479779962221805 20 20.92710963654807 28.86519318583328 30.28793698522547 19.919760192393174 21 19.8168700465337 28.5363177347175 31.915528537250275 19.731283681498528 22 18.325947278384678 26.34485088181932 29.238312435823175 26.090889403972824 23 17.00288154577679 26.96623275968364 29.97688339220418 26.054002302335387 24 20.43089522716134 25.117214982380194 30.07666507444252 24.375224716015946 25 17.316421909694988 28.47891477318059 28.58242661176429 25.62223670536013 26 16.547284394372852 28.229615990765787 30.48004003701144 24.74305957784992 27 19.44520141290033 27.45218923912064 29.258206602998428 23.84440274498061 28 17.244512784592796 25.895574273111688 31.276117570383388 25.58379537191213 29 17.829629253543906 22.294833629846224 33.238076192587975 26.637460924021894 30 19.56726041775679 25.89640319674399 29.404304393191637 25.132031992307592 31 21.54807705259624 29.238519666731257 24.92842762512343 24.284975655549072 32 21.825041161239117 26.991411315014812 26.344332804549133 24.83921471919694 33 20.71034610670112 24.420608284884473 29.14992845352899 25.719117154885417 34 19.275893761002667 25.379672927457786 30.78612008823892 24.55831322330063 35 19.99166931749537 22.682666274309483 29.457977198383183 27.86768720981197 36 21.357839078982952 22.741934314019066 32.68404435984818 23.216182247149796 37 20.98679213807381 25.636639253471376 31.16328034093629 22.213288267518525 38 20.36136925750202 25.120427061455363 28.79380213800128 25.724401543041342 39 19.910952878799968 24.46205446649957 32.42365872385135 23.20333393084912 40 21.829600241216777 23.712914733806716 32.879152259801245 21.578332765175258 41 20.067204983488875 24.673844454552707 28.85876902768294 26.400181534275475 42 21.702256848204396 21.256503164934042 32.330508430671415 24.710731556190144 43 23.697372415701057 20.948972497350034 31.065363736870626 24.288291350078282 44 19.89717202341295 22.680283118866612 29.58107235778002 27.841472499940423 45 20.23526924993809 22.371923527650303 28.215524289016656 29.17728293339495 46 23.13028503575251 23.27617559503765 29.83482660471844 23.7587127644914 47 18.1634782464535 22.976623317414546 34.57751316693382 24.28238526919813 48 19.39090691498456 20.704232794912897 32.55359250321467 27.351267786887878 49 21.42933374226899 18.601046308854873 35.7371773285242 24.23244262035194 50 20.22283539545356 19.530787777935505 32.82226737553452 27.42410945107641 51 18.223886056157504 19.860699383591665 29.423058790372465 32.492355769878365 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1100.0 1 1237.0 2 1374.0 3 1728.5 4 2083.0 5 1602.5 6 1122.0 7 1194.5 8 1267.0 9 1532.0 10 1797.0 11 1872.0 12 1947.0 13 2251.0 14 2555.0 15 2480.5 16 2406.0 17 2266.5 18 2127.0 19 2472.5 20 2818.0 21 3285.0 22 3752.0 23 3943.0 24 4134.0 25 5316.5 26 7208.5 27 7918.0 28 9986.5 29 12055.0 30 13445.5 31 14836.0 32 16764.0 33 18692.0 34 20591.0 35 22490.0 36 25077.5 37 27665.0 38 30802.5 39 33940.0 40 38121.5 41 42303.0 42 48567.5 43 54832.0 44 63769.0 45 72706.0 46 91043.0 47 109380.0 48 126253.5 49 143127.0 50 137753.0 51 132379.0 52 104815.5 53 77252.0 54 62610.0 55 47968.0 56 39893.0 57 31818.0 58 28040.0 59 24262.0 60 21156.0 61 18050.0 62 16307.5 63 14565.0 64 12012.0 65 9459.0 66 7205.0 67 4951.0 68 4320.5 69 3690.0 70 2865.5 71 2041.0 72 1978.0 73 1915.0 74 1442.0 75 679.5 76 390.0 77 308.5 78 227.0 79 208.5 80 190.0 81 105.5 82 21.0 83 14.5 84 8.0 85 6.5 86 5.0 87 13.0 88 21.0 89 11.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 965107.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.68822132589392 #Duplication Level Percentage of deduplicated Percentage of total 1 62.3614218252544 13.525083187435492 2 13.01652345505123 5.646104831736809 3 6.655747591608894 4.330539805682974 4 4.040454461338391 3.505210824588101 5 2.6121337705789776 2.832626767457934 6 1.780350687839859 2.3167583853347 7 1.3071786749715266 1.9845266290689854 8 0.9284590014401748 1.6109299452202377 9 0.744905970696264 1.454011700349638 >10 4.700875327777921 20.58259434427946 >50 1.3432779392401506 20.998569861040515 >100 0.4913137903242016 15.301679857352676 >500 0.01012521059549385 1.464194529878918 >1k 0.005785834625996486 2.0516709524513908 >5k 0.0014464586564991214 2.3954983781221433 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTGC 9659 1.0008216705505193 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTGC 7522 0.7793954452718713 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTGCT 5727 0.5934057052741302 Illumina Single End Adapter 1 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTGC 2921 0.3026607412442351 Illumina Single End Adapter 1 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTGC 2097 0.21728160711713831 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTG 1800 0.1865078172679299 No Hit GAATCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTC 1702 0.17635350277223147 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGC 1577 0.16340157101751412 No Hit GCCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTG 1498 0.15521595014853273 No Hit ACCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTG 1487 0.15407618015411761 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCG 1442 0.1494134847224194 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCC 1404 0.1454760974689853 No Hit AGCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTG 1271 0.13169524208196606 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTC 1227 0.12713616210430553 No Hit GGCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTG 1194 0.12371685212106015 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6201384924158668 0.0 2 0.0 0.0 0.0 3.028886952431181 0.0 3 0.0 0.0 0.0 4.1665846377655535 0.0 4 0.0 0.0 0.0 5.411420702574947 0.0 5 0.0 0.0 0.0 8.787730272394667 0.0 6 0.0 0.0 0.0 10.364343021032902 0.0 7 0.0 0.0 0.0 12.02187943927461 0.0 8 0.0 0.0 0.0 14.513831108882227 0.0 9 0.0 0.0 0.0 15.348039129340062 0.0 10 0.0 0.0 0.0 17.402526352000347 0.0 11 0.0 0.0 0.0 20.476900488754097 0.0 12 0.0 0.0 0.0 22.975172701058018 0.0 13 0.0 0.0 0.0 23.860463140356458 0.0 14 0.0 0.0 0.0 24.20446644776175 0.0 15 0.0 0.0 0.0 24.86770896905732 0.0 16 0.0 0.0 0.0 26.20383024887396 0.0 17 0.0 0.0 0.0 27.880639141566686 0.0 18 0.0 0.0 0.0 29.72893161069187 0.0 19 0.0 0.0 0.0 30.895434392248735 0.0 20 0.0 0.0 0.0 31.84797126121767 0.0 21 0.0 0.0 0.0 33.06897577159838 0.0 22 0.0 0.0 0.0 34.304590060998414 0.0 23 0.0 0.0 0.0 35.43928289816569 0.0 24 0.0 0.0 0.0 36.351098893697795 0.0 25 0.0 0.0 0.0 37.08293484556635 0.0 26 1.0361545403773882E-4 0.0 0.0 37.78762354847701 0.0 27 1.0361545403773882E-4 0.0 0.0 38.49324479047401 0.0 28 1.0361545403773882E-4 0.0 0.0 39.18891894888339 0.0 29 1.0361545403773882E-4 0.0 0.0 39.90210411902515 0.0 30 1.0361545403773882E-4 0.0 0.0 40.756309922112266 0.0 31 3.1084636211321646E-4 0.0 0.0 41.485244641267755 0.0 32 3.1084636211321646E-4 0.0 0.0 42.18703211146536 0.0 33 3.1084636211321646E-4 0.0 0.0 42.800850061184924 0.0 34 3.1084636211321646E-4 0.0 0.0 43.503673685922905 0.0 35 3.1084636211321646E-4 0.0 0.0 44.229292710549196 0.0 36 3.1084636211321646E-4 0.0 0.0 44.86497352107072 0.0 37 3.1084636211321646E-4 0.0 0.0 45.48480116712447 0.0 38 3.1084636211321646E-4 0.0 0.0 46.069606789713475 0.0 39 3.1084636211321646E-4 0.0 0.0 46.72694323012889 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAT 20 7.032723E-4 45.000004 20 TCGCCCA 20 7.032723E-4 45.000004 22 CGGGTTA 90 0.0 45.000004 6 TCGCATA 20 7.032723E-4 45.000004 35 TCCGCGA 20 7.032723E-4 45.000004 33 TCCGCAC 20 7.032723E-4 45.000004 23 CGTATCA 20 7.032723E-4 45.000004 30 CGAAACT 35 1.2116652E-7 45.000004 23 GGCACGC 20 7.032723E-4 45.000004 9 CGCATCG 20 7.032723E-4 45.000004 21 CGCATAT 20 7.032723E-4 45.000004 36 GGCCGTA 20 7.032723E-4 45.000004 33 CGGCACG 20 7.032723E-4 45.000004 31 GACCGAC 45 3.8380676E-10 45.000004 9 GTCTCGC 45 3.8380676E-10 45.000004 31 CGCGCAT 30 2.1651376E-6 45.000004 25 TTCGTGC 30 2.1651376E-6 45.000004 42 AAGCGTA 20 7.032723E-4 45.000004 31 CGCGATT 20 7.032723E-4 45.000004 21 TTCCGCG 40 6.8139343E-9 45.000004 1 >>END_MODULE