##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934980.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 948214 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21300255005727 33.0 31.0 34.0 30.0 34.0 2 32.39814746460187 34.0 31.0 34.0 30.0 34.0 3 32.40347853965455 34.0 31.0 34.0 30.0 34.0 4 35.936536478052425 37.0 35.0 37.0 35.0 37.0 5 35.84313456666955 37.0 35.0 37.0 35.0 37.0 6 35.77873771110741 37.0 35.0 37.0 35.0 37.0 7 36.058151429951465 37.0 35.0 37.0 35.0 37.0 8 35.78246682710865 37.0 35.0 37.0 35.0 37.0 9 37.449203449854146 39.0 37.0 39.0 35.0 39.0 10 37.33802706983867 39.0 37.0 39.0 34.0 39.0 11 37.288352629258796 39.0 37.0 39.0 34.0 39.0 12 37.142583847106245 39.0 37.0 39.0 34.0 39.0 13 37.03567127251865 39.0 37.0 39.0 33.0 39.0 14 38.149564338851775 40.0 37.0 41.0 33.0 41.0 15 38.19371049151352 40.0 37.0 41.0 33.0 41.0 16 38.256069832337424 40.0 37.0 41.0 34.0 41.0 17 38.266101323119045 40.0 37.0 41.0 34.0 41.0 18 38.24474327525221 40.0 37.0 41.0 34.0 41.0 19 38.21474266357595 40.0 37.0 41.0 34.0 41.0 20 38.18176276663285 40.0 37.0 41.0 34.0 41.0 21 38.14112004252205 40.0 37.0 41.0 34.0 41.0 22 38.07694149211043 40.0 36.0 41.0 34.0 41.0 23 37.86059897871156 40.0 36.0 41.0 33.0 41.0 24 37.62213171288338 39.0 35.0 41.0 33.0 41.0 25 37.59278074358742 39.0 35.0 41.0 33.0 41.0 26 37.76643563583748 39.0 36.0 41.0 33.0 41.0 27 37.79294969279087 40.0 36.0 41.0 33.0 41.0 28 37.73592986393367 40.0 36.0 41.0 33.0 41.0 29 37.77359224816339 40.0 36.0 41.0 33.0 41.0 30 37.70727388543093 40.0 36.0 41.0 33.0 41.0 31 37.54875059849359 40.0 36.0 41.0 33.0 41.0 32 37.44326491699131 39.0 35.0 41.0 33.0 41.0 33 37.38136116952502 39.0 35.0 41.0 33.0 41.0 34 37.272256051903895 39.0 35.0 41.0 33.0 41.0 35 37.15932690299869 39.0 35.0 41.0 32.0 41.0 36 37.13214316599417 39.0 35.0 41.0 32.0 41.0 37 37.04517862001616 39.0 35.0 41.0 32.0 41.0 38 36.93644050815533 39.0 35.0 41.0 31.0 41.0 39 36.92352992046099 39.0 35.0 41.0 31.0 41.0 40 36.865924780692964 39.0 35.0 41.0 31.0 41.0 41 36.77839917993196 39.0 35.0 41.0 31.0 41.0 42 36.75135570662319 39.0 35.0 41.0 31.0 41.0 43 36.669241331598144 39.0 35.0 41.0 31.0 41.0 44 36.5388530437222 39.0 35.0 41.0 31.0 41.0 45 36.53305161071235 39.0 35.0 41.0 31.0 41.0 46 36.391810287551124 39.0 35.0 41.0 31.0 41.0 47 36.2946908609238 39.0 35.0 40.0 31.0 41.0 48 36.21985859732086 38.0 35.0 40.0 31.0 41.0 49 36.182565328079946 38.0 35.0 40.0 31.0 41.0 50 36.102423081709404 38.0 35.0 40.0 31.0 41.0 51 35.03938984237735 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 8.0 10 11.0 11 17.0 12 9.0 13 11.0 14 19.0 15 26.0 16 58.0 17 106.0 18 258.0 19 455.0 20 762.0 21 1268.0 22 1947.0 23 2847.0 24 3899.0 25 4981.0 26 6276.0 27 7534.0 28 8758.0 29 10550.0 30 13094.0 31 16954.0 32 22066.0 33 31785.0 34 60946.0 35 81533.0 36 70919.0 37 111515.0 38 202920.0 39 286470.0 40 208.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.3329375014501 23.96537068636405 25.586629178645325 14.115062633540528 2 30.472340631967043 28.145228819654633 23.406214209028764 17.976216339349556 3 30.64318814107364 25.57650488180938 25.795020955185223 17.985286021931756 4 29.506103052686417 25.379924784911424 25.965763002866442 19.148209159535718 5 26.051819525971986 28.60577886426482 24.757175068075348 20.585226541687845 6 26.411864832200326 32.94393459704244 24.07273041739523 16.571470153362007 7 77.2367841014792 6.533229840521232 10.130519060043408 6.099466997956158 8 76.03452385221058 5.644084563189322 10.463566241375892 7.857825343224209 9 69.2245632315068 8.838616599206508 12.50371751524445 9.433102654042232 10 37.09848198824316 27.811232485493782 20.03176498132278 15.058520544940276 11 30.409169238167756 24.56787180952823 25.106779693191623 19.916179259112393 12 27.85151874998682 21.376187231996152 30.514103356415323 20.258190661601706 13 24.460933924198546 24.699698591246282 30.989523462003305 19.84984402255187 14 19.272653641477557 28.70153783850481 29.135089758219134 22.8907187617985 15 16.80127059925291 26.346795132744294 36.18318227741839 20.668751990584404 16 19.345316563560548 26.75672369317475 31.64918467772043 22.248775065544276 17 19.486107566435425 25.92990611823913 28.753319398363658 25.830666916961782 18 20.14619062785405 26.571111584515734 31.20835591965527 22.07434186797495 19 21.230439542128675 27.645552586230533 28.282539595492157 22.841468276148632 20 22.613038828787595 28.44642665052404 28.14723258673675 20.793301933951618 21 22.000624331638218 27.77316091093361 29.58435543031425 20.64185932711392 22 19.925248941694594 26.31905877787082 27.973221234868923 25.782471045565664 23 19.15232215512532 27.532392476803757 29.396001324595506 23.919284043475418 24 22.45790507206179 23.87013901925093 29.970238785759335 23.701717122927946 25 19.55729402856317 27.492528058012223 26.85322089739236 26.096957016032245 26 19.044435116967268 28.05579753093711 27.344354755361135 25.555412596734495 27 22.176323066312033 27.373356647339104 28.373869189866426 22.076451096482437 28 18.267606257659136 25.471043456434938 30.39651386712282 25.8648364187831 29 19.432005855218335 24.462515845579162 28.540709164808785 27.564769134393714 30 24.28502426667398 24.441529021929647 27.461522398952138 23.811924312444237 31 22.10903867692314 26.755774540346376 25.762327913319144 25.372858869411335 32 22.312368305045062 26.834765147951835 24.581898179103028 26.27096836790007 33 24.97990959846617 25.050146907765548 25.411035905396883 24.5589075883714 34 20.093987222293702 24.191163598090725 27.940528193002844 27.77432098661273 35 20.62023973491216 25.0214614000637 26.01680633274767 28.34149253227647 36 22.58561885819024 25.21972887976765 28.201017913677713 23.9936343483644 37 21.00633401320799 26.035789389315074 29.459489102670915 23.498387494806025 38 20.390228366170508 27.119932842164324 26.90637345578108 25.583465335884092 39 23.137393035749316 22.98531766035937 28.324302319940436 25.55298698395088 40 24.09055339828351 22.57581094563042 28.186569698401414 25.147065957684656 41 19.609813818399644 25.409032138314767 27.298795419599376 27.682358623686216 42 20.804902690742807 24.12377374727646 29.996076834976073 25.075246727004664 43 22.751931526005734 22.52339661721932 29.75077355955512 24.973898297219826 44 20.953075993393895 22.67251907269878 28.45876563729285 27.915639296614476 45 22.362778866374047 21.92015726407752 26.083879799285814 29.63318407026262 46 23.749596610047945 24.322357611256532 27.01710795242424 24.910937826271283 47 19.57817539078731 23.51441763146294 32.05341832118066 24.853988656569086 48 19.63797201897462 22.496714876599587 31.158050819751658 26.707262284674133 49 21.80952822885973 20.209256560227963 32.94340728991557 25.037807920996734 50 20.33971234341615 21.412571423750336 30.713636373223768 27.53407985960975 51 19.370732767075786 20.538823514523095 27.96225324662998 32.12819047177114 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1208.0 1 1511.5 2 1815.0 3 2328.5 4 2842.0 5 2239.0 6 1636.0 7 1725.0 8 1814.0 9 1991.5 10 2169.0 11 2280.0 12 2391.0 13 2417.0 14 2443.0 15 2532.5 16 2622.0 17 2639.0 18 2656.0 19 2874.5 20 3093.0 21 3149.5 22 3206.0 23 3927.5 24 4649.0 25 6091.0 26 8319.5 27 9106.0 28 9515.5 29 9925.0 30 11382.0 31 12839.0 32 14961.5 33 17084.0 34 19651.0 35 22218.0 36 22506.0 37 22794.0 38 25171.5 39 27549.0 40 30858.5 41 34168.0 42 40192.0 43 46216.0 44 50501.0 45 54786.0 46 60244.5 47 65703.0 48 78922.5 49 92142.0 50 103138.0 51 114134.0 52 112906.0 53 111678.0 54 91696.5 55 71715.0 56 60826.0 57 49937.0 58 43680.0 59 37423.0 60 34810.5 61 32198.0 62 28851.0 63 25504.0 64 21853.0 65 18202.0 66 14518.0 67 10834.0 68 9072.0 69 7310.0 70 6543.5 71 5777.0 72 4865.0 73 3953.0 74 3130.0 75 1807.0 76 1307.0 77 982.5 78 658.0 79 474.5 80 291.0 81 215.5 82 140.0 83 117.0 84 94.0 85 77.0 86 60.0 87 48.0 88 36.0 89 41.5 90 47.0 91 24.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 948214.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.995934494020347 #Duplication Level Percentage of deduplicated Percentage of total 1 65.11677512769013 14.974210952982153 2 12.904744137663688 5.9351330170361445 3 6.098153774311454 4.206982341855873 4 3.5046005400200158 3.2236625778403445 5 2.2686068063304834 2.608436675553225 6 1.5563225032276407 2.147345420147556 7 1.1105437983351645 1.787659470747919 8 0.8143483214714115 1.4981360524697598 9 0.5954121461144839 1.2322852838093468 >10 4.1637433175264755 20.327264632036528 >50 1.3976332893274588 22.889746338207306 >100 0.4556996986310599 14.919565874033266 >500 0.006939589319254719 1.133885729767797 >1k 0.00601431074335409 2.316497267776695 >5k 4.626392879503146E-4 0.7991883657361316 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC 7512 0.7922262274127992 No Hit GCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC 3738 0.3942148080496597 No Hit CTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGCT 3300 0.3480227037356546 No Hit TCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC 1859 0.19605278977108542 No Hit CGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG 1576 0.16620720639011868 No Hit ACTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC 1474 0.15545014100192572 No Hit ATTACGGGGGCAGTTACCAAACATTGTTATGCAAGAAATCATAAAATGAAG 1470 0.15502829530042797 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCC 1395 0.1471186883973449 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGC 1345 0.14184561712862287 No Hit GAATCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTC 1276 0.13456877877778645 No Hit ACCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG 1167 0.12307348341197241 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCG 1134 0.11959325637461585 No Hit CGTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTC 1023 0.10788703815805294 No Hit AGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG 1017 0.10725426960580628 No Hit GGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG 991 0.10451227254607083 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 980 0.10335219686695198 No Hit GCCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG 955 0.10071566123259096 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1092285074888158E-4 0.0 0.0 0.37038052591503606 0.0 2 2.1092285074888158E-4 0.0 0.0 2.00007593222627 0.0 3 2.1092285074888158E-4 0.0 0.0 2.9060950376180905 0.0 4 2.1092285074888158E-4 0.0 0.0 3.9408825433921035 0.0 5 2.1092285074888158E-4 0.0 0.0 6.676657379030472 0.0 6 2.1092285074888158E-4 0.0 0.0 8.04902690742807 0.0 7 2.1092285074888158E-4 0.0 0.0 9.521795712782136 0.0 8 2.1092285074888158E-4 0.0 0.0 11.429487436380395 0.0 9 2.1092285074888158E-4 0.0 0.0 12.126165612403952 0.0 10 2.1092285074888158E-4 0.0 0.0 13.749533333192717 0.0 11 2.1092285074888158E-4 0.0 0.0 16.233993592163795 0.0 12 2.1092285074888158E-4 0.0 0.0 18.277730554495083 0.0 13 2.1092285074888158E-4 0.0 0.0 19.012374843653436 0.0 14 2.1092285074888158E-4 0.0 0.0 19.306506759022753 0.0 15 2.1092285074888158E-4 0.0 0.0 19.92767455447821 0.0 16 2.1092285074888158E-4 0.0 0.0 21.11538112704516 0.0 17 2.1092285074888158E-4 0.0 0.0 22.426372105874833 0.0 18 2.1092285074888158E-4 0.0 0.0 23.85832733960899 0.0 19 2.1092285074888158E-4 0.0 0.0 24.755804069545484 0.0 20 2.1092285074888158E-4 0.0 0.0 25.634825050041446 0.0 21 2.1092285074888158E-4 0.0 0.0 26.693974145076954 0.0 22 2.1092285074888158E-4 0.0 0.0 27.756181621448324 0.0 23 3.1638427612332235E-4 0.0 0.0 28.720626356497583 0.0 24 3.1638427612332235E-4 0.0 0.0 29.480265003469682 0.0 25 3.1638427612332235E-4 0.0 0.0 30.15047236172425 0.0 26 3.1638427612332235E-4 0.0 0.0 30.77670230559768 0.0 27 3.1638427612332235E-4 0.0 0.0 31.40904901214283 0.0 28 4.2184570149776315E-4 0.0 0.0 32.04223941009097 0.0 29 4.2184570149776315E-4 0.0 0.0 32.69789309164387 0.0 30 4.2184570149776315E-4 0.0 0.0 33.4087030986676 0.0 31 4.2184570149776315E-4 0.0 0.0 34.086398218123755 0.0 32 4.2184570149776315E-4 0.0 0.0 34.7439502053334 0.0 33 4.2184570149776315E-4 0.0 0.0 35.34961517125881 0.0 34 4.2184570149776315E-4 0.0 0.0 35.9549637529081 0.0 35 4.2184570149776315E-4 0.0 0.0 36.62031988559544 0.0 36 4.2184570149776315E-4 0.0 0.0 37.22999238568509 0.0 37 4.2184570149776315E-4 0.0 0.0 37.833653584528385 0.0 38 4.2184570149776315E-4 0.0 0.0 38.4479663873345 0.0 39 4.2184570149776315E-4 0.0 0.0 39.04392890212547 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGACAT 25 3.890287E-5 45.0 38 AACCGTA 25 3.890287E-5 45.0 24 GGTAACG 25 3.890287E-5 45.0 29 CGACGGA 20 7.032662E-4 45.0 3 ACGTTAT 20 7.032662E-4 45.0 11 ACGTTAG 35 1.2116288E-7 45.0 1 TTAGCGA 25 3.890287E-5 45.0 21 TAGACCG 45 3.8380676E-10 45.0 1 TTCACGT 20 7.032662E-4 45.0 19 GGTCCAC 35 1.2116288E-7 45.0 35 GAATCGT 25 3.890287E-5 45.0 10 GAATCGG 20 7.032662E-4 45.0 33 GATTTCG 20 7.032662E-4 45.0 22 TACGGTC 20 7.032662E-4 45.0 14 ATCGTAG 25 3.890287E-5 45.0 1 ATATCCG 20 7.032662E-4 45.0 1 TACGATT 25 3.890287E-5 45.0 40 TAACACG 25 3.890287E-5 45.0 1 ACGGATA 35 1.2116288E-7 45.0 32 ACTACGT 35 1.2116288E-7 45.0 17 >>END_MODULE