##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934978.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1429785 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14837335683337 33.0 31.0 34.0 30.0 34.0 2 32.317409260832925 34.0 31.0 34.0 30.0 34.0 3 32.333658557055784 34.0 31.0 34.0 30.0 34.0 4 35.87857614956095 37.0 35.0 37.0 35.0 37.0 5 35.80483289445616 37.0 35.0 37.0 35.0 37.0 6 35.74033928178013 37.0 35.0 37.0 35.0 37.0 7 36.04051378354088 37.0 35.0 37.0 35.0 37.0 8 35.776758044041586 37.0 35.0 37.0 35.0 37.0 9 37.486368929594306 39.0 37.0 39.0 35.0 39.0 10 37.31154614155275 39.0 37.0 39.0 34.0 39.0 11 37.26831236864284 39.0 37.0 39.0 34.0 39.0 12 37.1353930835755 39.0 37.0 39.0 34.0 39.0 13 36.998628465118884 39.0 37.0 39.0 33.0 39.0 14 38.090974517147686 40.0 37.0 41.0 33.0 41.0 15 38.14719975380914 40.0 37.0 41.0 33.0 41.0 16 38.203068992890536 40.0 37.0 41.0 34.0 41.0 17 38.21734176816794 40.0 37.0 41.0 34.0 41.0 18 38.229119762761535 40.0 37.0 41.0 34.0 41.0 19 38.218829404420944 40.0 37.0 41.0 34.0 41.0 20 38.1853054829922 40.0 37.0 41.0 34.0 41.0 21 38.10463810992562 40.0 37.0 41.0 34.0 41.0 22 38.03801830345122 40.0 36.0 41.0 34.0 41.0 23 37.8137104529702 40.0 36.0 41.0 33.0 41.0 24 37.58001517710705 39.0 35.0 41.0 33.0 41.0 25 37.55241102683271 39.0 35.0 41.0 33.0 41.0 26 37.74485604478995 39.0 36.0 41.0 33.0 41.0 27 37.770808897841285 40.0 36.0 41.0 33.0 41.0 28 37.69847214791035 40.0 36.0 41.0 33.0 41.0 29 37.724585164902415 40.0 36.0 41.0 33.0 41.0 30 37.65523068153603 40.0 36.0 41.0 33.0 41.0 31 37.528221375941136 39.0 36.0 41.0 33.0 41.0 32 37.4643411421997 39.0 35.0 41.0 33.0 41.0 33 37.41319638966698 39.0 35.0 41.0 33.0 41.0 34 37.296747413072595 39.0 35.0 41.0 33.0 41.0 35 37.23283780428526 39.0 35.0 41.0 32.0 41.0 36 37.19795843431005 39.0 35.0 41.0 32.0 41.0 37 37.10642439247859 39.0 35.0 41.0 32.0 41.0 38 37.001406505173854 39.0 35.0 41.0 32.0 41.0 39 37.014724591459554 39.0 35.0 41.0 32.0 41.0 40 36.956619351860596 39.0 35.0 41.0 32.0 41.0 41 36.88261102193687 39.0 35.0 41.0 32.0 41.0 42 36.86337596212018 39.0 35.0 41.0 32.0 41.0 43 36.7867189822246 39.0 35.0 41.0 31.0 41.0 44 36.63094451263652 39.0 35.0 41.0 31.0 41.0 45 36.61923645862839 39.0 35.0 41.0 31.0 41.0 46 36.48972817591456 39.0 35.0 41.0 31.0 41.0 47 36.42554370062632 39.0 35.0 40.0 31.0 41.0 48 36.40265844165381 39.0 35.0 40.0 31.0 41.0 49 36.3740527421955 39.0 35.0 40.0 31.0 41.0 50 36.276598929209634 39.0 35.0 40.0 31.0 41.0 51 35.22924495640953 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 15.0 10 33.0 11 15.0 12 27.0 13 24.0 14 30.0 15 45.0 16 108.0 17 202.0 18 341.0 19 634.0 20 1132.0 21 1841.0 22 2961.0 23 4278.0 24 5924.0 25 7295.0 26 8560.0 27 10394.0 28 12466.0 29 15528.0 30 19453.0 31 25413.0 32 33828.0 33 47784.0 34 89275.0 35 124438.0 36 107660.0 37 169924.0 38 315580.0 39 424308.0 40 260.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.43986683312526 22.342939672748 24.760715771951727 11.456477722175013 2 31.61006724787293 24.78680361033302 24.20203037519627 19.401098766597773 3 30.32875572201415 24.525855285934597 26.84095860566449 18.304430386386763 4 28.581150312809267 25.469004081033162 26.026710309591998 19.923135296565565 5 24.683081722077098 28.72340946366062 25.461240676045698 21.132268138216585 6 26.145399483139077 32.23967239829765 25.58706378931098 16.0278643292523 7 77.04871711481097 6.538395632909843 10.180551621397623 6.2323356308815665 8 75.20487345999574 5.1245466975804055 11.162797203775392 8.507782638648468 9 69.08451270645587 7.503995355945124 13.971191472843818 9.44030046475519 10 36.873795710543895 26.05391719734086 20.925733589315875 16.14655350279937 11 28.065898019632325 24.45332689879947 25.46145049780212 22.01932458376609 12 25.61986592389765 22.183405197284905 31.546840958605664 20.64988792021178 13 22.874977706438383 26.276538080900274 32.05929562836371 18.78918858429764 14 18.664274698643503 29.37609500729131 30.133271785618117 21.826358508447075 15 16.51674902170606 26.457614256688945 36.3919050766374 20.6337316449676 16 19.172183230345823 27.385655885325416 30.96514510922971 22.477015775099055 17 18.628605000052456 26.89558220291862 27.791940746335985 26.683872050692937 18 20.711715397769595 25.107341313554137 32.18232111821008 21.998622170466188 19 20.074346842357418 27.594078830033887 28.204730081795514 24.12684424581318 20 22.54499802417846 28.43455484565861 28.499389768391755 20.521057361771174 21 21.013299202327623 27.85894382721878 31.226163374213606 19.901593596239994 22 20.066653377955426 25.47075259566998 27.785506212472505 26.67708781390209 23 18.632032088740615 26.771647485461102 29.144661609962334 25.45165881583595 24 21.17535153886773 24.655315309644457 30.032207639610153 24.13712551187766 25 18.439905300447272 27.596246988183537 27.633175617313093 26.3306720940561 26 18.18462216347213 27.590511860174782 27.50812185048801 26.716744125865077 27 22.153680448459035 26.504054805442777 27.66926495941697 23.672999786681213 28 17.64139363610613 25.910469056536474 30.41065614760261 26.037481159754787 29 18.85863958567197 23.472200365789263 30.43807285710789 27.23108719143088 30 22.50527177163 24.706581758795902 27.766342492053003 25.021803977521095 31 20.98378427525817 26.207856425966142 28.236972691698405 24.57138660707729 32 20.713254090649993 26.445724357158596 27.632406270872895 25.20861528131852 33 20.589878897876254 24.29840850197757 27.086380120087984 28.02533248005819 34 17.747703326024542 22.834132404522357 32.96041013159321 26.45775413785989 35 18.063834772360877 24.893393062593326 28.671653430410863 28.371118734634926 36 21.44811982221103 24.305542441695778 27.926296611028935 26.320041125064257 37 19.83501015887004 24.359396692509712 33.209048912948454 22.596544235671796 38 18.091111600695207 27.143381697248188 28.949667257664615 25.81583944439199 39 20.162262158296524 21.67983298188189 30.95661235780205 27.201292502019538 40 21.39188759149103 22.4896750210696 31.12195190185937 24.99648548558 41 18.5753102739223 25.746248561846713 26.91621467563305 28.762226488597936 42 20.600230104526204 22.862598222809723 29.01023580468392 27.52693586798015 43 22.671660424469415 21.300195483936395 30.1576111093626 25.87053298223159 44 20.449508142832666 21.658221340970847 29.579901873358583 28.31236864283791 45 20.788719982374975 21.06533499791927 28.73669817490042 29.409246844805338 46 22.645922289015484 22.31741135905049 29.25782547725707 25.778840874676963 47 17.345475018971385 23.718531107823903 33.039792696104655 25.896201177100053 48 18.91529145990481 21.514843140751932 31.687771238333035 27.882094161010222 49 21.57995782582696 18.695608080935244 33.734722353360816 25.989711739876974 50 19.50230279377669 20.42530870025913 32.605461660319556 27.466926845644622 51 18.615386229398126 19.893830191252533 28.863640337533266 32.62714324181608 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1480.0 1 1746.0 2 2012.0 3 2669.0 4 3326.0 5 2625.0 6 1924.0 7 2075.0 8 2226.0 9 2366.5 10 2507.0 11 2831.5 12 3156.0 13 3345.0 14 3534.0 15 3527.0 16 3520.0 17 3553.0 18 3586.0 19 3699.5 20 3813.0 21 4017.5 22 4222.0 23 5585.5 24 6949.0 25 6970.0 26 8426.0 27 9861.0 28 11753.0 29 13645.0 30 17207.0 31 20769.0 32 21942.5 33 23116.0 34 25610.0 35 28104.0 36 28640.0 37 29176.0 38 34913.5 39 40651.0 40 47199.5 41 53748.0 42 65160.5 43 76573.0 44 89796.5 45 103020.0 46 127612.0 47 152204.0 48 174774.5 49 197345.0 50 194361.5 51 191378.0 52 157615.0 53 123852.0 54 103604.0 55 83356.0 56 71745.0 57 60134.0 58 52838.0 59 45542.0 60 41432.0 61 37322.0 62 32523.5 63 27725.0 64 24626.0 65 21527.0 66 17837.0 67 14147.0 68 11412.0 69 8677.0 70 7618.0 71 6559.0 72 5777.0 73 4995.0 74 3766.0 75 2303.0 76 2069.0 77 1644.5 78 1220.0 79 1047.5 80 875.0 81 504.5 82 134.0 83 170.5 84 207.0 85 120.0 86 33.0 87 26.5 88 20.0 89 16.0 90 12.0 91 7.0 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1429785.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.26199437786876 #Duplication Level Percentage of deduplicated Percentage of total 1 63.275856837354105 12.820950554932974 2 12.264267089713679 4.969970216409189 3 6.33422016382543 3.8503180004284148 4 3.8076202305594524 3.0859991881861992 5 2.531118220615391 2.564275157791512 6 1.8168158622130477 2.208738767147014 7 1.3532593030243896 1.919381267277515 8 1.0377707215540977 1.6821843620516748 9 0.8189680890446428 1.4934534134288828 >10 4.828106493082843 18.87236427378807 >50 1.0862694902597112 16.399977940541945 >100 0.8230678584324883 23.92721628319442 >500 0.014293003894668477 1.9104731870641816 >1k 0.007320806872878976 2.440591176819669 >5k 6.9721970217895E-4 1.1317189116405633 >10k+ 3.48609851089475E-4 0.7223872992977182 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGC 10227 0.7152823676286995 TruSeq Adapter, Index 23 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGC 9397 0.6572316816864073 TruSeq Adapter, Index 23 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGCT 6625 0.4633563787562466 TruSeq Adapter, Index 22 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGC 4145 0.2899037267840969 TruSeq Adapter, Index 23 (95% over 23bp) ACTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGC 3217 0.2249988634654861 TruSeq Adapter, Index 22 (95% over 21bp) ACCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTG 2300 0.16086334658707427 No Hit GCCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTG 2191 0.15323982277055642 TruSeq Adapter, Index 23 (95% over 22bp) AGCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTG 1944 0.1359644981588141 No Hit CGCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTG 1809 0.12652251912000756 No Hit GGCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTG 1716 0.12001804467105194 TruSeq Adapter, Index 23 (95% over 22bp) GGCCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCT 1613 0.11281416436736992 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCC 1518 0.10616980874746902 No Hit GAATCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTC 1512 0.10575016523463318 No Hit AGCCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCT 1434 0.10029479956776717 TruSeq Adapter, Index 23 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0982175641792296E-4 0.0 0.0 0.48349926737236715 0.0 2 2.0982175641792296E-4 0.0 0.0 2.4532359760383553 0.0 3 2.0982175641792296E-4 0.0 0.0 3.4970292736320494 0.0 4 2.0982175641792296E-4 0.0 0.0 4.759456841413219 0.0 5 2.0982175641792296E-4 0.0 0.0 8.006028878467742 0.0 6 2.0982175641792296E-4 0.0 0.0 9.651730854638984 0.0 7 2.0982175641792296E-4 0.0 0.0 11.318904590550327 0.0 8 2.0982175641792296E-4 0.0 0.0 13.643310008148077 0.0 9 2.0982175641792296E-4 0.0 0.0 14.4802190539137 0.0 10 2.0982175641792296E-4 0.0 0.0 16.34595411198187 0.0 11 2.0982175641792296E-4 0.0 0.0 19.293040562042545 0.0 12 2.0982175641792296E-4 0.0 0.0 21.465465087408248 0.0 13 2.0982175641792296E-4 0.0 0.0 22.320768507153172 0.0 14 2.0982175641792296E-4 0.0 0.0 22.686068185076778 0.0 15 2.0982175641792296E-4 0.0 0.0 23.39904251338488 0.0 16 2.0982175641792296E-4 0.0 0.0 24.74462943729302 0.0 17 2.0982175641792296E-4 0.0 0.0 26.315494987008535 0.0 18 4.895840983084869E-4 0.0 0.0 28.01071489769441 0.0 19 5.595246837811279E-4 0.0 0.0 29.041289424633774 0.0 20 5.595246837811279E-4 0.0 0.0 29.96618372692398 0.0 21 5.595246837811279E-4 0.0 0.0 31.136289721881262 0.0 22 5.595246837811279E-4 0.0 0.0 32.21386432225824 0.0 23 5.595246837811279E-4 0.0 0.0 33.231989424983475 0.0 24 5.595246837811279E-4 0.0 0.0 34.136880719828504 0.0 25 5.595246837811279E-4 0.0 0.0 34.896155715719495 0.0 26 5.595246837811279E-4 0.0 0.0 35.55905258482919 0.0 27 5.595246837811279E-4 0.0 0.0 36.22992268068276 0.0 28 5.595246837811279E-4 0.0 0.0 36.89177044101036 0.0 29 5.595246837811279E-4 0.0 0.0 37.61824330231468 0.0 30 5.595246837811279E-4 0.0 0.0 38.40367607717244 0.0 31 6.29465269253769E-4 0.0 0.0 39.140570085712184 0.0 32 6.29465269253769E-4 0.0 0.0 39.80584493472795 0.0 33 6.29465269253769E-4 0.0 0.0 40.462027507632264 0.0 34 6.994058547264099E-4 0.0 0.0 41.09715796430932 0.0 35 6.994058547264099E-4 0.0 0.0 41.78628255297125 0.0 36 7.693464401990509E-4 0.0 0.0 42.401270121032184 0.0 37 7.693464401990509E-4 0.0 0.0 43.02744818276874 0.0 38 7.693464401990509E-4 0.0 0.0 43.64075717677833 0.0 39 7.693464401990509E-4 0.0 0.0 44.29204390869956 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATCG 20 7.033864E-4 45.000004 2 CGAGTTT 30 2.1658743E-6 45.000004 27 GTCGACG 20 7.033864E-4 45.000004 1 TACCACG 20 7.033864E-4 45.000004 25 GCGAAGT 30 2.1658743E-6 45.000004 29 CGGCACA 20 7.033864E-4 45.000004 24 ACTTCGC 20 7.033864E-4 45.000004 40 TCGATAT 20 7.033864E-4 45.000004 17 TAGCACG 30 2.1658743E-6 45.000004 1 AATGCGC 20 7.033864E-4 45.000004 38 CCCGTAA 20 7.033864E-4 45.000004 16 TGACCGA 40 6.8175723E-9 45.000004 25 GTATGCG 55 1.8189894E-12 45.000004 1 CTACGAT 20 7.033864E-4 45.000004 26 TCGTAGT 30 2.1658743E-6 45.000004 17 ACCACGT 20 7.033864E-4 45.000004 13 CCGACAA 20 7.033864E-4 45.000004 36 TTACGTA 20 7.033864E-4 45.000004 13 TTTGCGA 20 7.033864E-4 45.000004 1 CAATGCG 30 2.1658743E-6 45.000004 1 >>END_MODULE