SRR2934977.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934977.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1093905
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	9087	0.8306937074060362	No Hit
GCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	7511	0.6866226957551158	No Hit
CTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGCT	6296	0.5755527216714431	No Hit
TCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	3808	0.3481106677453709	No Hit
ACTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	3004	0.2746125120554344	No Hit
GAATCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTC	2769	0.25312984217093804	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGC	2724	0.24901613942709833	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCG	2466	0.22543091036241722	No Hit
CGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	2146	0.19617791307289023	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCC	2009	0.1836539736083115	No Hit
ACCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	1946	0.1778947897669359	No Hit
AGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	1737	0.15878892591221358	No Hit
GCCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	1735	0.15860609467915404	No Hit
GGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	1470	0.13438095629876454	No Hit
CGTTCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTC	1353	0.12368532916478123	No Hit
AAAACTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTC	1260	0.11518367682751243	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1198	0.10951590860266659	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1107	0.10119708749845735	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTAGCG	65	0.0	45.000004	1
TAATACG	40	6.8139343E-9	45.000004	1
CCGGGTA	25	3.8906815E-5	45.000004	5
TCGCACA	25	3.8906815E-5	45.000004	19
TCCGACA	50	2.1827873E-11	45.000004	20
CGGTTTA	20	7.033136E-4	45.000004	13
CGTTGCC	25	3.8906815E-5	45.000004	40
ATCACTC	20	7.033136E-4	45.000004	38
CGTTCGC	20	7.033136E-4	45.000004	15
GCGCAAC	35	1.2118471E-7	45.000004	23
ATCGTTC	20	7.033136E-4	45.000004	44
CCCGTTG	20	7.033136E-4	45.000004	36
GCCGATT	25	3.8906815E-5	45.000004	9
TTCCCGA	20	7.033136E-4	45.000004	43
CCCGTAC	25	3.8906815E-5	45.000004	38
CCGTACT	25	3.8906815E-5	45.000004	39
GTTCGCC	20	7.033136E-4	45.000004	16
TAATTCG	20	7.033136E-4	45.000004	18
GTATGCG	25	3.8906815E-5	45.000004	1
CGCTACC	20	7.033136E-4	45.000004	34