##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934976.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1158585 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14104446372083 33.0 31.0 34.0 30.0 34.0 2 32.31842204067893 34.0 31.0 34.0 30.0 34.0 3 32.325755123706934 34.0 31.0 34.0 30.0 34.0 4 35.887159768165475 37.0 35.0 37.0 35.0 37.0 5 35.80299158024659 37.0 35.0 37.0 35.0 37.0 6 35.735005200309 37.0 35.0 37.0 35.0 37.0 7 36.05804494275345 37.0 35.0 37.0 35.0 37.0 8 35.74900158382855 37.0 35.0 37.0 35.0 37.0 9 37.508337325271775 39.0 37.0 39.0 35.0 39.0 10 37.31289460850952 39.0 37.0 39.0 34.0 39.0 11 37.24103626406349 39.0 37.0 39.0 34.0 39.0 12 37.121692409275106 39.0 37.0 39.0 34.0 39.0 13 37.0300711643945 39.0 37.0 39.0 33.0 39.0 14 38.1231778419365 40.0 37.0 41.0 33.0 41.0 15 38.185719649399914 40.0 37.0 41.0 33.0 41.0 16 38.265712917049676 40.0 37.0 41.0 34.0 41.0 17 38.28157450683377 40.0 37.0 41.0 34.0 41.0 18 38.30301790546227 40.0 37.0 41.0 34.0 41.0 19 38.26663300491548 40.0 37.0 41.0 34.0 41.0 20 38.22849855642875 40.0 37.0 41.0 34.0 41.0 21 38.165607184626076 40.0 37.0 41.0 34.0 41.0 22 38.08618961923381 40.0 37.0 41.0 34.0 41.0 23 37.842525149212186 40.0 36.0 41.0 33.0 41.0 24 37.56787029005209 39.0 36.0 41.0 33.0 41.0 25 37.555323088077266 39.0 36.0 41.0 33.0 41.0 26 37.74274481371673 39.0 36.0 41.0 33.0 41.0 27 37.714958332793884 39.0 36.0 41.0 33.0 41.0 28 37.728237462076585 40.0 36.0 41.0 33.0 41.0 29 37.76878433606512 40.0 36.0 41.0 33.0 41.0 30 37.59265310702279 40.0 36.0 41.0 33.0 41.0 31 37.58217135557598 40.0 36.0 41.0 33.0 41.0 32 37.50484858685379 40.0 36.0 41.0 33.0 41.0 33 37.35362619056867 39.0 35.0 41.0 33.0 41.0 34 37.330061238493506 39.0 35.0 41.0 33.0 41.0 35 37.29409408891018 39.0 35.0 41.0 33.0 41.0 36 37.255227713115566 39.0 35.0 41.0 33.0 41.0 37 37.211757445504645 39.0 35.0 41.0 32.0 41.0 38 37.12930945938364 39.0 35.0 41.0 32.0 41.0 39 37.082190775817054 39.0 35.0 41.0 32.0 41.0 40 37.00753246416966 39.0 35.0 41.0 32.0 41.0 41 37.02466456928063 39.0 35.0 41.0 32.0 41.0 42 37.07108930289966 39.0 35.0 41.0 32.0 41.0 43 36.97230328374698 39.0 35.0 41.0 32.0 41.0 44 36.82354682651683 39.0 35.0 41.0 31.0 41.0 45 36.8205949498742 39.0 35.0 41.0 31.0 41.0 46 36.67540836451361 39.0 35.0 41.0 31.0 41.0 47 36.61439514580285 39.0 35.0 41.0 31.0 41.0 48 36.61802284683472 39.0 35.0 41.0 31.0 41.0 49 36.59298972453467 39.0 35.0 40.0 31.0 41.0 50 36.512694364246045 39.0 35.0 40.0 31.0 41.0 51 35.493866224748295 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 9.0 10 12.0 11 14.0 12 11.0 13 12.0 14 20.0 15 33.0 16 65.0 17 115.0 18 248.0 19 511.0 20 930.0 21 1588.0 22 2386.0 23 3538.0 24 4530.0 25 5836.0 26 6492.0 27 7874.0 28 9300.0 29 11978.0 30 15369.0 31 19893.0 32 27053.0 33 38406.0 34 69828.0 35 98109.0 36 86580.0 37 137838.0 38 257873.0 39 351847.0 40 282.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.61989409495203 22.230047860105216 25.996452569297894 11.15360547564486 2 29.9132994126456 26.95589879033476 25.20574666511305 17.925055131906593 3 30.220484470280557 26.0830236883785 27.17936103091271 16.517130810428238 4 28.630182507109964 25.1046750993669 27.98465369394563 18.280488699577504 5 25.63100678845316 29.83941618439735 24.310861956610864 20.218715070538632 6 25.101999421708378 34.07501391783943 24.733014841379784 16.089971819072403 7 78.28963779092601 5.622634506747455 10.440753160104784 5.646974542221762 8 76.39180552139032 6.066192812784561 9.39352744943185 8.148474216393273 9 71.0739393311669 7.425350751131768 11.841513570432898 9.659196347268436 10 38.41720719670978 28.47085021815404 18.373705856713148 14.738236728423033 11 27.761105141185155 23.878351609937983 26.789575214593665 21.5709680342832 12 25.12901513484121 21.43166017167493 31.59440179184091 21.844922901642953 13 22.57624602424509 26.179779644997993 33.010007897564705 18.233966433192215 14 18.167937613554468 29.49701575628892 29.181372104765728 23.153674525390887 15 15.606364660339983 25.56195704242675 37.5911132976864 21.24056499954686 16 17.247418186839983 27.791918590349436 31.553144568590135 23.40751865422045 17 17.773749875926235 26.447606347397905 28.489062088668504 27.289581688007353 18 18.212302075376428 25.846700932603135 32.32184086622906 23.619156125791374 19 19.246580958669412 27.717258552458386 29.004604754938136 24.031555733934066 20 22.13562233241411 27.57622444619946 29.771920057656537 20.516233163729893 21 20.72070672415058 28.760513902734804 29.904754506574832 20.614024866539786 22 19.01664530440149 25.336941182563212 27.796579448206217 27.849834064829082 23 18.1403177151439 27.815654440546012 28.951522762680337 25.092505081629746 24 20.64535618879927 24.970632279893145 29.35624058657759 25.027770944729994 25 17.89484586802004 28.92165874752392 26.388137253632664 26.795358130823377 26 17.522581424755195 28.11205047536435 27.975159353867003 26.390208746013457 27 20.881851568939698 29.656865918340042 26.551957776080304 22.909324736639952 28 18.441288295636486 26.70662920717945 29.29694411717742 25.555138380006646 29 20.415679471078946 24.12468657888718 28.05983160493188 27.399802345101996 30 21.053008626902646 30.209350198733798 25.08862103341576 23.649020140947794 31 23.03482265004294 27.870548988637 23.378345136524295 25.716283224795767 32 23.938942762076152 27.901017189071155 23.496420202229444 24.663619846623252 33 21.3698606489813 29.16825265302071 23.081431228610764 26.380455469387226 34 21.4663576690532 24.214796497451633 26.00870889921758 28.31013693427759 35 19.061613951501187 25.038473655364086 27.08864692707052 28.811265466064206 36 21.955920368380394 26.912052201607995 24.63116646599084 26.500860964020767 37 21.873405921878845 25.7425221282858 28.450307918711186 23.93376403112417 38 21.933565513104348 26.791128833879256 25.834530914865976 25.440774738150417 39 22.51720849139252 24.559441042305917 26.960818584739144 25.962531881562423 40 20.445543486235366 23.990643759413423 29.753190314046872 25.810622440304336 41 18.136347354747386 24.827008808158226 26.74210351420051 30.294540322893877 42 21.139493433800713 22.15694144149976 29.625016722985364 27.07854840171416 43 24.027499061355016 22.633471001264475 27.088215366157858 26.25081457122265 44 21.985525446989215 23.758205051852045 26.888230039228887 27.368039461929854 45 22.304448961448664 23.04405805357397 25.407889796605343 29.243603188372024 46 24.21410599999137 24.7293897297134 26.889006848871684 24.167497421423548 47 18.16353569224528 23.8213855694662 31.656028690169475 26.35905004811904 48 20.578118998606058 22.208556126654496 28.757406664163614 28.45591821057583 49 21.46817022488639 20.582952480827906 32.274369165835914 25.67450812844979 50 21.188691377844528 20.845773076640903 30.20762395508314 27.757911590431434 51 18.97469758369045 20.920260490166882 27.141297358415656 32.96374456772701 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1033.0 1 1177.5 2 1322.0 3 1850.0 4 2378.0 5 1834.0 6 1290.0 7 1382.0 8 1474.0 9 1646.0 10 1818.0 11 2045.5 12 2273.0 13 2321.0 14 2369.0 15 2348.0 16 2327.0 17 2436.0 18 2545.0 19 2322.5 20 2100.0 21 2661.0 22 3222.0 23 3523.5 24 3825.0 25 4148.0 26 5979.5 27 7488.0 28 9675.0 29 11862.0 30 13862.0 31 15862.0 32 17595.0 33 19328.0 34 21706.5 35 24085.0 36 27698.0 37 31311.0 38 33010.5 39 34710.0 40 39782.0 41 44854.0 42 51399.0 43 57944.0 44 65606.5 45 73269.0 46 77788.5 47 82308.0 48 109514.5 49 136721.0 50 148008.5 51 159296.0 52 154162.0 53 149028.0 54 120103.0 55 91178.0 56 76730.0 57 62282.0 58 49421.0 59 36560.0 60 31338.0 61 26116.0 62 23775.0 63 21434.0 64 17677.5 65 13921.0 66 11233.5 67 8546.0 68 7421.0 69 6296.0 70 5271.5 71 4247.0 72 3600.5 73 2954.0 74 2472.0 75 1572.0 76 1154.0 77 888.5 78 623.0 79 450.0 80 277.0 81 257.0 82 237.0 83 199.0 84 161.0 85 116.0 86 71.0 87 41.0 88 11.0 89 8.5 90 6.0 91 6.5 92 7.0 93 4.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1158585.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.639865972799072 #Duplication Level Percentage of deduplicated Percentage of total 1 64.0063571506926 13.210826329974045 2 12.604357905749172 5.203045156957066 3 6.26051732986571 3.8764871582644247 4 3.6937229148085495 3.0495178360922073 5 2.4420314134999654 2.5201600538002173 6 1.6863634793931608 2.0883789717658767 7 1.2271967042588832 1.7730422848714857 8 0.9284495716635073 1.5330459777309995 9 0.7123911406313608 1.3233291896556665 >10 4.494730758053601 18.361566194338348 >50 1.1317466600372983 17.2866060906806 >100 0.7935332333246911 23.315120928646945 >500 0.010991936103591877 1.5686459712506398 >1k 0.005495968051795939 2.0139260731192503 >5k 0.002113833866075361 2.8763017828522464 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTGC 9329 0.8052063508503907 TruSeq Adapter, Index 13 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTGC 7240 0.6249002015389462 TruSeq Adapter, Index 13 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGC 5771 0.49810760539796384 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTC 5436 0.4691930242494076 No Hit CTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTGCT 5187 0.4477012907986898 TruSeq Adapter, Index 8 (95% over 24bp) GAATGATACCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCG 4696 0.40532200917498495 No Hit TCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTGC 3289 0.2838807683510489 TruSeq Adapter, Index 13 (95% over 23bp) ACTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTGC 2501 0.21586676851504208 TruSeq Adapter, Index 8 (95% over 23bp) GCCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTG 1380 0.11911081189554501 TruSeq Adapter, Index 13 (95% over 22bp) GGCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTG 1379 0.119024499713012 TruSeq Adapter, Index 13 (95% over 22bp) AGCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTG 1360 0.11738456824488491 TruSeq Adapter, Index 8 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTG 1331 0.11488151495142782 TruSeq Adapter, Index 8 (95% over 22bp) ACCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTG 1330 0.11479520276889482 TruSeq Adapter, Index 8 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCC 1222 0.10547348705533043 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCT 1207 0.10417880431733537 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4696245851620727 0.0 2 0.0 0.0 0.0 2.4999460548859167 0.0 3 0.0 0.0 0.0 3.4016494258082055 0.0 4 0.0 0.0 0.0 4.557024301194992 0.0 5 0.0 0.0 0.0 7.79122809288917 0.0 6 0.0 0.0 0.0 9.17627968599628 0.0 7 0.0 0.0 0.0 10.784103022221071 0.0 8 0.0 0.0 0.0 13.203778747351295 0.0 9 0.0 0.0 0.0 14.044545717405283 0.0 10 0.0 0.0 0.0 16.331818554529878 0.0 11 0.0 0.0 0.0 19.11063927117993 0.0 12 0.0 0.0 0.0 21.838363175770443 0.0 13 0.0 0.0 0.0 22.69259484629958 0.0 14 0.0 0.0 0.0 23.028867109448164 0.0 15 8.631218253300361E-5 0.0 0.0 23.705986181419576 0.0 16 8.631218253300361E-5 0.0 0.0 24.94974473172016 0.0 17 8.631218253300361E-5 0.0 0.0 26.428099794145446 0.0 18 1.7262436506600723E-4 0.0 0.0 28.060953663304808 0.0 19 1.7262436506600723E-4 0.0 0.0 29.14063275461015 0.0 20 1.7262436506600723E-4 0.0 0.0 30.037157394580458 0.0 21 1.7262436506600723E-4 0.0 0.0 31.15610852893832 0.0 22 1.7262436506600723E-4 0.0 0.0 32.25089225218694 0.0 23 1.7262436506600723E-4 0.0 0.0 33.29380235373322 0.0 24 2.5893654759901087E-4 0.0 0.0 34.12878640755749 0.0 25 2.5893654759901087E-4 0.0 0.0 34.84888894643034 0.0 26 2.5893654759901087E-4 0.0 0.0 35.55552678482805 0.0 27 2.5893654759901087E-4 0.0 0.0 36.160402560019335 0.0 28 3.4524873013201446E-4 0.0 0.0 36.773391680368725 0.0 29 3.4524873013201446E-4 0.0 0.0 37.444900460475495 0.0 30 3.4524873013201446E-4 0.0 0.0 38.149466806492406 0.0 31 4.315609126650181E-4 0.0 0.0 38.83668440382018 0.0 32 4.315609126650181E-4 0.0 0.0 39.42006844556075 0.0 33 4.315609126650181E-4 0.0 0.0 40.00250305329346 0.0 34 4.315609126650181E-4 0.0 0.0 40.59857498586638 0.0 35 4.315609126650181E-4 0.0 0.0 41.23305583966649 0.0 36 4.315609126650181E-4 0.0 0.0 41.83102664025514 0.0 37 4.315609126650181E-4 0.0 0.0 42.407764643940666 0.0 38 4.315609126650181E-4 0.0 0.0 42.98277640397554 0.0 39 4.315609126650181E-4 0.0 0.0 43.55260943305843 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCCG 20 7.0333085E-4 45.000004 16 TGTTTCG 20 7.0333085E-4 45.000004 12 TCGCAAA 20 7.0333085E-4 45.000004 31 AGATCGC 20 7.0333085E-4 45.000004 22 GCGACTT 35 1.211938E-7 45.000004 42 ATAGGCC 20 7.0333085E-4 45.000004 25 CTATCGG 85 0.0 45.000004 2 GTTTACG 40 6.8157533E-9 45.000004 1 GCAACGA 65 0.0 45.000004 11 ATTACGC 35 1.211938E-7 45.000004 30 GAATCGT 65 0.0 45.000004 15 GAATCGC 20 7.0333085E-4 45.000004 7 CAACCCG 20 7.0333085E-4 45.000004 30 CTAAGTC 20 7.0333085E-4 45.000004 22 CGTTCGG 20 7.0333085E-4 45.000004 45 TACGCTT 35 1.211938E-7 45.000004 26 CCCGTCG 20 7.0333085E-4 45.000004 43 CCGTACG 35 1.211938E-7 45.000004 24 TACGAAC 20 7.0333085E-4 45.000004 42 CGAATAT 130 0.0 45.000004 14 >>END_MODULE