##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934969.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1720734 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.609731079876376 34.0 31.0 34.0 31.0 34.0 2 32.77051711653283 34.0 31.0 34.0 31.0 34.0 3 32.818926109439346 34.0 31.0 34.0 31.0 34.0 4 36.21786807257833 37.0 37.0 37.0 35.0 37.0 5 36.111636080881766 37.0 35.0 37.0 35.0 37.0 6 36.10662659074558 37.0 36.0 37.0 35.0 37.0 7 36.29281864599642 37.0 37.0 37.0 35.0 37.0 8 36.31846002926658 37.0 37.0 37.0 35.0 37.0 9 38.14590517767418 39.0 39.0 39.0 37.0 39.0 10 37.6254650631649 39.0 38.0 39.0 35.0 39.0 11 37.44434351852175 39.0 37.0 39.0 34.0 39.0 12 37.51088779555701 39.0 37.0 39.0 35.0 39.0 13 37.5523108161982 39.0 37.0 39.0 35.0 39.0 14 38.88760958986107 40.0 38.0 41.0 35.0 41.0 15 38.932877481353884 40.0 38.0 41.0 35.0 41.0 16 39.010239235117105 40.0 38.0 41.0 35.0 41.0 17 39.017597722832235 40.0 38.0 41.0 35.0 41.0 18 38.486889315838475 39.0 38.0 41.0 35.0 41.0 19 37.943412520470915 38.0 37.0 41.0 35.0 41.0 20 37.36266325881862 38.0 35.0 41.0 34.0 41.0 21 37.325527362160564 38.0 35.0 41.0 34.0 41.0 22 37.1437328488889 38.0 35.0 41.0 34.0 41.0 23 37.03543371607697 38.0 35.0 40.0 34.0 41.0 24 36.83042701544806 38.0 35.0 40.0 33.0 41.0 25 36.689211696868895 37.0 35.0 40.0 33.0 41.0 26 36.80441427902279 38.0 35.0 40.0 33.0 41.0 27 36.85174175671545 38.0 35.0 40.0 33.0 41.0 28 36.78490690600639 38.0 35.0 40.0 33.0 41.0 29 36.63156013654638 38.0 35.0 40.0 33.0 41.0 30 36.314372238823665 38.0 35.0 40.0 33.0 41.0 31 35.74057814862727 38.0 35.0 40.0 30.0 41.0 32 34.921188864751905 38.0 35.0 40.0 21.0 41.0 33 33.86409869276716 38.0 34.0 41.0 15.0 41.0 34 32.97612937269793 38.0 33.0 41.0 10.0 41.0 35 32.417364334057446 38.0 31.0 41.0 8.0 41.0 36 32.17819198086398 38.0 31.0 41.0 7.0 41.0 37 31.984240446228178 38.0 30.0 41.0 7.0 41.0 38 31.85891602072139 38.0 29.0 41.0 7.0 41.0 39 31.793183025383353 38.0 29.0 41.0 7.0 41.0 40 31.6857323676989 38.0 27.0 41.0 7.0 41.0 41 31.551718627051013 38.0 27.0 41.0 7.0 41.0 42 31.42283060600883 38.0 25.0 40.0 7.0 41.0 43 31.323375373532457 37.0 24.0 40.0 7.0 41.0 44 31.20839246507595 37.0 24.0 40.0 7.0 41.0 45 31.16226621895075 37.0 23.0 40.0 7.0 41.0 46 31.08876735160693 37.0 23.0 40.0 7.0 41.0 47 31.055054993973503 37.0 23.0 40.0 7.0 41.0 48 30.982774211470222 37.0 23.0 40.0 7.0 41.0 49 30.845071347459864 36.0 24.0 40.0 7.0 41.0 50 30.755470049409148 36.0 24.0 40.0 7.0 41.0 51 30.205209521053224 35.0 23.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 8.0 10 10.0 11 10.0 12 17.0 13 20.0 14 25.0 15 44.0 16 115.0 17 237.0 18 534.0 19 1070.0 20 1903.0 21 3179.0 22 5316.0 23 9800.0 24 20642.0 25 45832.0 26 80756.0 27 93354.0 28 82258.0 29 62728.0 30 48161.0 31 40812.0 32 39006.0 33 45725.0 34 74389.0 35 97762.0 36 106428.0 37 145732.0 38 291388.0 39 423161.0 40 306.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.118736539174563 15.158066267069751 18.799651776509325 36.92354541724636 2 52.1917972214183 16.903774784481506 18.844923154886228 12.059504839213965 3 22.5558976576275 17.37456225076043 47.41435922112308 12.655180870488989 4 19.89546321511634 19.195122546541185 47.473694365311545 13.435719873030926 5 18.557836365179046 21.934651143058716 46.11433260457456 13.393179887187676 6 19.33738741723009 25.114631314311218 44.93303439113773 10.614946877320957 7 60.71850733466068 3.3474087220918514 32.77984859949301 3.1542353437544675 8 62.00609739797086 2.8530266735009593 32.259954182343115 2.8809217461850585 9 58.20057022177745 4.849384041926294 33.403477818186886 3.5465679181093646 10 27.901174731248407 23.314411175695955 39.43032450105595 9.354089591999692 11 18.967312786287714 18.755891381236147 48.2315105065629 14.045285325913243 12 18.85515134820373 16.45681435945358 49.98657549627078 14.70145879607191 13 16.88413200413312 18.099194878464655 50.87084930035671 14.145823817045516 14 14.348644241352817 20.775087840421588 48.99415017079921 15.882117747426388 15 13.526088285580457 20.607601174847478 51.54509645302527 14.321214086546789 16 15.771699751385166 19.387191744918155 50.43708092011897 14.404027583577705 17 15.868693243697166 19.55380668947089 48.36261734817816 16.214882718653783 18 15.777394995391504 19.429266812883338 49.95153231121138 14.841805880513782 19 16.241034349295127 20.929033772796956 48.067336380870024 14.762595497037893 20 17.20475099579598 20.444240655441224 48.8032432671174 13.547765081645391 21 16.844207181354005 20.026105138853538 48.96887026117924 14.16081741861322 22 15.7743149144493 18.64355559894789 48.37261308255663 17.20951640404618 23 14.649387993728258 20.207423111300177 49.00141451264402 16.141774382327544 24 15.001156483221695 19.118992244007497 50.10716357089474 15.772687701876059 25 14.721217805889811 21.328107656383846 47.540526310283866 16.410148227442477 26 13.943119622207734 21.851721416558284 48.22163100165395 15.98352795958004 27 14.572618429112227 21.278535787634812 48.24662033760011 15.902225445652842 28 13.722632318533833 20.752016290722448 49.324648667371015 16.2007027233727 29 15.057179087528926 19.656262966850193 48.35698021890658 16.9295777267143 30 15.607816199366084 20.19673000010461 47.11535891079039 17.080094889738913 31 16.081625631852454 21.51558579071489 45.738853303299635 16.663935274133017 32 16.67561633581948 22.769817996273684 43.727269874367565 16.827295793539268 33 16.33558702274727 23.25368127787328 41.78280896408161 18.627922735297844 34 16.313096620395715 23.9871473452608 40.87488246294895 18.824873571394534 35 16.057624246397175 25.537416009679593 38.88067533970968 19.524284404213553 36 17.026803677965333 27.277487397819765 36.66749189590024 19.02821702831466 37 17.867317086778083 26.31667648805684 37.856984286938015 17.95902213822706 38 17.959951973983195 26.200214559600727 36.683531562693595 19.15630190372248 39 17.94664369972349 25.59198574561786 37.16257132130823 19.29879923335042 40 17.65316428919287 25.390037042331937 37.99006702953507 18.966731638940125 41 16.23847730096575 26.414425471920705 36.97701097322422 20.370086253889326 42 17.670831168559463 26.466496274264355 36.14445928307339 19.718213274102794 43 18.336244881544737 26.371827371342693 35.07073144367462 20.221196303437953 44 17.919910921734562 25.826536815103324 34.92126034587565 21.33229191728646 45 18.094080781805904 24.86590024954467 35.1573805131996 21.882638455449825 46 17.789385227466884 25.610117542862522 35.85423429768924 20.746262931981352 47 16.23016689389528 25.0335031445883 38.59940002347835 20.13692993803807 48 16.992864672866347 24.32223690587854 37.64817804495058 21.03672037630453 49 17.67606149468773 23.722550957905174 37.63364936126095 20.967738186146146 50 16.949975998614544 23.267861273154363 37.859076417389325 21.923086310841768 51 16.480583285969825 23.16645106100071 36.50779260478377 23.84517304824569 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 271.0 1 663.0 2 1055.0 3 62911.5 4 124768.0 5 87631.5 6 50495.0 7 48480.5 8 46466.0 9 46047.5 10 45629.0 11 44730.0 12 43831.0 13 42117.0 14 40403.0 15 37340.0 16 34277.0 17 31698.0 18 29119.0 19 26754.0 20 24389.0 21 22674.5 22 20960.0 23 19568.0 24 18176.0 25 18329.5 26 19799.0 27 21115.0 28 21898.5 29 22682.0 30 24402.0 31 26122.0 32 28300.5 33 30479.0 34 36685.0 35 42891.0 36 45909.5 37 48928.0 38 53180.0 39 57432.0 40 61352.0 41 65272.0 42 72849.5 43 80427.0 44 87286.0 45 94145.0 46 105744.0 47 117343.0 48 124480.0 49 131617.0 50 128235.0 51 124853.0 52 108721.0 53 92589.0 54 80071.5 55 67554.0 56 60488.5 57 53423.0 58 47354.0 59 41285.0 60 38274.0 61 35263.0 62 31618.0 63 27973.0 64 23775.0 65 19577.0 66 14127.0 67 8677.0 68 6982.5 69 5288.0 70 4120.5 71 2953.0 72 2402.0 73 1851.0 74 1408.0 75 888.0 76 811.0 77 652.5 78 494.0 79 377.0 80 260.0 81 155.5 82 51.0 83 46.0 84 41.0 85 27.5 86 14.0 87 23.5 88 33.0 89 18.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1720734.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.450846189244345 #Duplication Level Percentage of deduplicated Percentage of total 1 78.00297019524317 27.652712986957766 2 9.922693081806951 7.0353573245243455 3 3.6595713425193312 3.892047023466577 4 1.8529319960350148 2.6275202876226733 5 1.0634619670069294 1.8850313310236948 6 0.6888760331166027 1.4652742976084085 7 0.4860739010926947 1.2062211772970164 8 0.3680423709090151 1.043793078577625 9 0.27842604524276404 0.8883395014482733 >10 2.8387483582647266 24.03993534812355 >50 0.7554895754823961 17.692553133953982 >100 0.07701065096456984 4.788840987421802 >500 0.003187798941211993 0.7209454052259537 >1k 0.0023489044829983104 1.2887917696919369 >5k 0.0 0.0 >10k+ 1.6777889164273647E-4 3.7726363470564968 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 63428 3.6861013962646174 No Hit GCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGC 2859 0.16615002667466325 TruSeq Adapter, Index 20 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGC 2833 0.16463904357094122 TruSeq Adapter, Index 20 (95% over 22bp) CTGTCTCTTATACACATCTGACGCACGGCTTATCGTATGCCGTCTTCTGCT 1950 0.11332373277915123 TruSeq Adapter, Index 22 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1751 0.10175890056220195 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7434420427561728E-4 0.0 0.0 0.1296539732463007 0.0 2 1.7434420427561728E-4 0.0 0.0 0.6602415015917625 0.0 3 1.7434420427561728E-4 0.0 0.0 0.9942849969838453 0.0 4 1.7434420427561728E-4 0.0 0.0 1.351516271544585 0.0 5 2.3245893903415634E-4 0.0 0.0 2.262987771497512 0.0 6 2.3245893903415634E-4 0.0 0.0 2.7271501580139637 0.0 7 2.3245893903415634E-4 0.0 0.0 3.2227526160347852 0.0 8 2.3245893903415634E-4 0.0 0.0 4.0236898904769705 0.0 9 2.3245893903415634E-4 0.0 0.0 4.294330210247487 0.0 10 2.3245893903415634E-4 0.0 0.0 5.0397097982605095 0.0 11 2.3245893903415634E-4 0.0 0.0 6.1941008895041305 0.0 12 2.3245893903415634E-4 0.0 0.0 7.084941658617776 0.0 13 2.9057367379269544E-4 0.0 0.0 7.399632947335265 0.0 14 2.9057367379269544E-4 0.0 0.0 7.520685939837302 0.0 15 2.9057367379269544E-4 0.0 0.0 7.75628307454842 0.0 16 2.9057367379269544E-4 0.0 0.0 8.310581414675365 0.0 17 2.9057367379269544E-4 0.0 0.0 9.067293375966303 0.0 18 2.9057367379269544E-4 0.0 0.0 9.904668589102092 0.0 19 2.9057367379269544E-4 0.0 0.0 10.423575055761088 0.0 20 2.9057367379269544E-4 0.0 0.0 10.917375957004394 0.0 21 2.9057367379269544E-4 0.0 0.0 11.57029500201658 0.0 22 2.9057367379269544E-4 0.0 0.0 12.277667553497519 0.0 23 3.4868840855123456E-4 0.0 0.0 13.047106641700577 0.0 24 4.068031433097736E-4 0.0 0.0 13.597336950394425 0.0 25 4.068031433097736E-4 0.0 0.0 14.092067687393868 0.0 26 4.068031433097736E-4 0.0 0.0 14.560123761139142 0.0 27 4.068031433097736E-4 0.0 0.0 15.02126418144815 0.0 28 4.649178780683127E-4 0.0 0.0 15.489727058336733 0.0 29 4.649178780683127E-4 0.0 0.0 16.013515162715446 0.0 30 4.649178780683127E-4 0.0 0.0 16.551541377110002 0.0 31 5.230326128268518E-4 0.0 0.0 17.083872347498218 0.0 32 5.811473475853909E-4 0.0 0.0 17.581102018092277 0.0 33 5.811473475853909E-4 0.0 0.0 18.05839833466416 0.0 34 6.3926208234393E-4 0.0 0.0 18.514657117253453 0.0 35 6.3926208234393E-4 0.0 0.0 19.031529568195896 0.0 36 6.3926208234393E-4 0.0 0.0 19.50278195235289 0.0 37 6.973768171024691E-4 0.0 0.0 19.989027938077587 0.0 38 6.973768171024691E-4 0.0 0.0 20.464115894728646 0.0 39 6.973768171024691E-4 0.0 0.0 20.953848764538854 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCAA 35 1.2123928E-7 45.000004 9 CTCCGTA 20 7.0342654E-4 45.0 30 ATTACGC 20 7.0342654E-4 45.0 35 CCGCTAA 20 7.0342654E-4 45.0 22 GTAATCG 20 7.0342654E-4 45.0 1 TGTAGCG 45 3.8562575E-10 45.0 1 CGTTTTT 49450 0.0 44.558647 1 TCGTAAG 65 0.0 41.538464 1 CGCGAAG 60 3.6379788E-12 41.249996 1 TGCGAAG 115 0.0 41.08696 1 GCGTTAG 110 0.0 40.909092 1 TAGCGAG 100 0.0 40.5 1 CCTCGTG 95 0.0 40.263157 15 CGACATA 45 1.9292202E-8 40.0 34 CACTCGA 40 3.459554E-7 39.375 44 TGTAACG 80 0.0 39.375 1 TAGTCCG 40 3.459554E-7 39.375 1 TCGCGCG 40 3.459554E-7 39.375 1 AGTCGTG 40 3.459554E-7 39.375 1 GTTGCCG 40 3.459554E-7 39.375 1 >>END_MODULE