SRR2934967.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934967.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1714504
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	65714	3.8328286198224095	No Hit
CCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC	3337	0.19463354999463403	No Hit
GCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC	2977	0.17363622365418802	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	1908	0.1112858296043637	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGATAC	30	2.166129E-6	45.000004	25
ATTACGC	20	7.0342596E-4	45.0	11
ATAGCGC	20	7.0342596E-4	45.0	36
TATATCG	25	3.891611E-5	45.0	15
TACTCGA	20	7.0342596E-4	45.0	44
TATAGCG	20	7.0342596E-4	45.0	1
ATCGCTA	25	3.891611E-5	45.0	34
CGTTTTT	48325	0.0	44.343506	1
TAGGTCG	70	0.0	41.785713	1
TCGATGG	160	0.0	40.78125	2
GTTTTTT	54155	0.0	39.81904	2
TTGGACG	80	0.0	39.375	1
TCAGACG	110	0.0	38.863636	22
CGTAAGG	215	0.0	38.720932	2
CTATCGA	30	1.1401559E-4	37.500004	45
AACGGAT	30	1.1401559E-4	37.500004	13
TCAATCG	30	1.1401559E-4	37.500004	31
CCGTACT	30	1.1401559E-4	37.500004	26
AGTAACG	60	1.5643309E-10	37.500004	1
AAATGCG	30	1.1401559E-4	37.500004	1