##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934967.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1714504 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.70302198186764 34.0 31.0 34.0 31.0 34.0 2 32.84886999388745 34.0 31.0 34.0 31.0 34.0 3 32.89055493600482 34.0 31.0 34.0 31.0 34.0 4 36.26445957548072 37.0 37.0 37.0 35.0 37.0 5 36.16224575737356 37.0 37.0 37.0 35.0 37.0 6 36.166570623340625 37.0 37.0 37.0 35.0 37.0 7 36.30046065800955 37.0 37.0 37.0 35.0 37.0 8 36.31134427216268 37.0 37.0 37.0 35.0 37.0 9 38.0913640329798 39.0 39.0 39.0 37.0 39.0 10 37.68951428518102 39.0 38.0 39.0 35.0 39.0 11 37.58202663860802 39.0 37.0 39.0 35.0 39.0 12 37.49984310331151 39.0 37.0 39.0 35.0 39.0 13 37.46056235506012 39.0 37.0 39.0 35.0 39.0 14 38.79594448306916 40.0 38.0 41.0 35.0 41.0 15 38.835248561683144 40.0 38.0 41.0 35.0 41.0 16 38.913447854306554 40.0 38.0 41.0 35.0 41.0 17 38.910558972157546 40.0 38.0 41.0 35.0 41.0 18 38.3785473816334 39.0 38.0 41.0 35.0 41.0 19 37.89305011828494 38.0 37.0 41.0 35.0 41.0 20 37.3214894803395 38.0 35.0 41.0 34.0 41.0 21 37.26339921050053 38.0 35.0 41.0 34.0 41.0 22 37.077904746795575 38.0 35.0 41.0 34.0 41.0 23 36.97897409396537 38.0 35.0 40.0 34.0 41.0 24 36.78782551688418 37.0 35.0 40.0 33.0 41.0 25 36.64524608866471 37.0 35.0 40.0 33.0 41.0 26 36.733966791561876 37.0 35.0 40.0 33.0 41.0 27 36.7520688199036 37.0 35.0 40.0 33.0 41.0 28 36.65932246293972 37.0 35.0 40.0 33.0 41.0 29 36.474881948365244 37.0 35.0 40.0 33.0 41.0 30 36.15810870082543 37.0 35.0 40.0 32.0 41.0 31 35.59528411715575 37.0 35.0 40.0 30.0 41.0 32 34.842275666898416 37.0 35.0 40.0 22.0 41.0 33 33.90317316261729 37.0 34.0 40.0 16.0 41.0 34 33.11316334053464 37.0 33.0 41.0 12.0 41.0 35 32.62597987522922 37.0 33.0 41.0 10.0 41.0 36 32.37758908698959 37.0 32.0 40.0 8.0 41.0 37 32.14379494011096 37.0 31.0 40.0 8.0 41.0 38 32.00288829888994 37.0 30.0 40.0 8.0 41.0 39 31.929862514173195 37.0 30.0 40.0 7.0 41.0 40 31.816591853970593 37.0 29.0 40.0 7.0 41.0 41 31.666092934166382 36.0 29.0 40.0 7.0 41.0 42 31.518821770027948 36.0 29.0 40.0 7.0 41.0 43 31.39764095038565 36.0 27.0 40.0 7.0 41.0 44 31.293567119120166 36.0 26.0 40.0 7.0 41.0 45 31.245189862490843 36.0 25.0 40.0 7.0 41.0 46 31.17961171277524 35.0 25.0 40.0 7.0 41.0 47 31.161375534848563 35.0 25.0 40.0 7.0 41.0 48 31.10358331039181 35.0 25.0 40.0 7.0 41.0 49 30.976411253633703 35.0 25.0 40.0 7.0 41.0 50 30.90861380317573 35.0 25.0 40.0 7.0 41.0 51 30.377872550895187 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 5.0 10 18.0 11 19.0 12 28.0 13 28.0 14 46.0 15 90.0 16 164.0 17 335.0 18 609.0 19 1088.0 20 1915.0 21 3079.0 22 4991.0 23 8677.0 24 17458.0 25 38094.0 26 69258.0 27 87705.0 28 83588.0 29 65935.0 30 51754.0 31 44232.0 32 42318.0 33 49424.0 34 91373.0 35 116429.0 36 114847.0 37 146111.0 38 274150.0 39 400433.0 40 299.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.725856574262878 14.590575466723903 17.291823174515777 38.39174478449744 2 52.44764666632449 17.28762370924769 17.41150793465632 12.853221689771502 3 23.688133710974135 17.35277374680957 45.9933601788039 12.96573236341239 4 21.183910915343446 18.759652937525956 45.92646036404698 14.129975783083621 5 19.113749515894977 21.85121761162412 44.68551837732662 14.349514495154283 6 20.57014740123091 24.704112676319216 43.572193474030975 11.1535464484189 7 59.494990971149676 4.220287616710139 32.789074857801445 3.495646554338747 8 60.277491332770296 3.754846882830253 32.40797338472235 3.559688399677108 9 56.06163648495425 5.346444219436059 34.0489144382282 4.543004857381494 10 31.27388445871226 19.298759291316905 38.93965835017008 10.487697899800759 11 24.40250941380131 18.299753164763686 43.407597765884475 13.890139655550527 12 23.25558878836095 15.73953749889181 46.96139524900496 14.043478463742284 13 19.26218894794063 17.10605516230933 47.3682767727576 16.263479116992436 14 14.807197883469506 19.84177348084344 47.680203720726226 17.67082491496083 15 14.545081259652937 19.46358830308941 51.051382790591326 14.939947646666324 16 16.918712350627356 18.45064228488239 49.63563806208676 14.995007302403494 17 16.66796927857853 18.134865827084685 47.22736138265061 17.969803511686177 18 16.43087446865099 18.98502424024674 47.88661910383411 16.697482187268154 19 18.25944996337133 19.824217382986568 46.10388777162375 15.812444882018356 20 20.252737818051166 18.980941426791656 46.52377597252617 14.242544782631011 21 19.304883511499536 19.142970795052097 46.496304470564084 15.055841222884286 22 17.631454928072493 18.68260441503782 46.23745409751158 17.448486559378107 23 17.414657533607386 18.763210817822532 47.400122717707276 16.422008930862802 24 17.670183329989314 17.503137933769768 47.98221526458965 16.844463471651277 25 16.76869811910617 18.980999752698157 46.12873460779328 18.1215675204024 26 15.455490334230776 20.792077475468123 46.36250484105024 17.38992734925086 27 16.65764559312781 20.476301017670416 46.75958761251067 16.1064657766911 28 15.160419573241008 20.506922118583567 47.41330437257656 16.919353935598867 29 16.62859929169019 20.15480862103559 46.3983752735485 16.81821681372572 30 17.753939331725093 19.704124341500513 45.30762249606883 17.234313830705556 31 16.997160694871518 21.089189643185435 44.3690420086509 17.544607653292147 32 19.701849631146967 22.028878322826895 41.96508144629584 16.3041905997303 33 19.599954272489303 22.915898708897732 39.82726199530593 17.65688502330703 34 17.811507001441818 23.821641710955472 40.086637301516944 18.280213986085773 35 19.392897304409907 25.173927853186694 36.661856723577195 18.7713181188262 36 19.050582559154133 27.960214732657374 35.191693924306975 17.79750878388152 37 19.84982245594061 27.14837644006663 36.14654733963875 16.855253764354007 38 19.635708053174564 26.579407222147044 34.62873227475701 19.156152449921375 39 19.559126137938435 26.396905460704673 35.06885956521536 18.975108836141533 40 19.869653264151033 25.14085706420049 36.419279278438545 18.570210393209933 41 17.98875943129908 27.109764689962812 35.107646293038684 19.79382958569942 42 18.87513823239841 27.308597705225534 34.101057798640305 19.71520626373575 43 19.339295796335268 26.716998035583465 34.19356268635127 19.750143481729992 44 18.701793638276726 26.26864679230845 34.43456533201439 20.59499423740044 45 18.985432521592248 25.510934940950854 33.96918292404101 21.534449613415894 46 18.34880525213123 26.3889731374205 35.144099984601965 20.118121625846307 47 17.76548786121234 25.23884458712257 37.39408015379375 19.601587397871338 48 18.374060369646266 23.69641598969731 37.45905521363613 20.470468427020293 49 18.507510043721098 24.28626588214434 37.534528936648734 19.671695137485827 50 17.530317806199346 23.36710792159132 37.56724977019593 21.535324502013413 51 16.849887780955893 23.40968583333722 36.58848273319864 23.151943652508248 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 479.0 1 972.5 2 1466.0 3 72718.0 4 143970.0 5 99973.5 6 55977.0 7 53141.5 8 50306.0 9 48177.0 10 46048.0 11 43675.5 12 41303.0 13 38467.0 14 35631.0 15 32183.0 16 28735.0 17 26206.0 18 23677.0 19 21562.0 20 19447.0 21 17983.5 22 16520.0 23 15497.0 24 14474.0 25 13883.0 26 14880.5 27 16469.0 28 17123.0 29 17777.0 30 20150.5 31 22524.0 32 24826.0 33 27128.0 34 29839.0 35 32550.0 36 35461.5 37 38373.0 38 40804.0 39 43235.0 40 48895.0 41 54555.0 42 61326.5 43 68098.0 44 73414.0 45 78730.0 46 86600.0 47 94470.0 48 99756.5 49 105043.0 50 106338.5 51 107634.0 52 95957.0 53 84280.0 54 77174.5 55 70069.0 56 67393.5 57 64718.0 58 65612.0 59 66506.0 60 66316.5 61 66127.0 62 62044.5 63 57962.0 64 48126.5 65 38291.0 66 30874.5 67 23458.0 68 20234.0 69 17010.0 70 13722.5 71 10435.0 72 9064.5 73 7694.0 74 5927.5 75 3470.5 76 2780.0 77 2154.5 78 1529.0 79 1146.5 80 764.0 81 613.5 82 463.0 83 335.5 84 208.0 85 160.5 86 113.0 87 61.0 88 9.0 89 10.0 90 11.0 91 6.0 92 1.0 93 0.5 94 0.0 95 1.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1714504.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.00893760790645 #Duplication Level Percentage of deduplicated Percentage of total 1 77.55706474853072 23.27405117091019 2 9.669552122861493 5.803459727026997 3 3.63371635299013 3.271319019651305 4 1.846608835319449 2.2165907730124053 5 1.0106405550783915 1.5164124680683693 6 0.6690104077140107 1.204577495047788 7 0.4586744287472318 0.9635032620232468 8 0.34377863158733746 0.8253145204988692 9 0.26676252550852225 0.7204733985701517 >10 3.268346240292609 25.112482419264648 >50 1.1586439716928167 23.188637576039522 >100 0.1100499224722963 5.871799322601706 >500 0.004767504803394883 0.9736356788304037 >1k 0.002185106368222655 1.1404288355907948 >5k 0.0 0.0 >10k+ 1.9864603347478682E-4 3.917314332863598 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 65714 3.8328286198224095 No Hit CCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC 3337 0.19463354999463403 No Hit GCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC 2977 0.17363622365418802 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1908 0.1112858296043637 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10516160942173364 0.0 2 0.0 0.0 0.0 0.6146967286165561 0.0 3 0.0 0.0 0.0 0.8919780881234456 0.0 4 0.0 0.0 0.0 1.171942439329392 0.0 5 0.0 0.0 0.0 1.9034076327614284 0.0 6 0.0 0.0 0.0 2.282584350925982 0.0 7 0.0 0.0 0.0 2.6780339970043814 0.0 8 0.0 0.0 0.0 3.2548772123016336 0.0 9 0.0 0.0 0.0 3.4618758544745303 0.0 10 0.0 0.0 0.0 3.990250241469253 0.0 11 0.0 0.0 0.0 4.803488355816026 0.0 12 0.0 0.0 0.0 5.477794160876848 0.0 13 5.832590650123884E-5 0.0 0.0 5.7154139039628955 0.0 14 5.832590650123884E-5 0.0 0.0 5.81730926262056 0.0 15 5.832590650123884E-5 0.0 0.0 6.033348420301149 0.0 16 5.832590650123884E-5 0.0 0.0 6.492664933998404 0.0 17 5.832590650123884E-5 0.0 0.0 7.027863452053772 0.0 18 5.832590650123884E-5 0.0 0.0 7.616021893212264 0.0 19 5.832590650123884E-5 0.0 0.0 7.967377153975727 0.0 20 5.832590650123884E-5 0.0 0.0 8.357927423908022 0.0 21 1.1665181300247768E-4 0.0 0.0 8.822084987844882 0.0 22 1.1665181300247768E-4 0.0 0.0 9.31925501486144 0.0 23 1.1665181300247768E-4 0.0 0.0 9.794436175127034 0.0 24 1.1665181300247768E-4 0.0 0.0 10.200267832562654 0.0 25 1.1665181300247768E-4 0.0 0.0 10.546432087647506 0.0 26 1.1665181300247768E-4 0.0 0.0 10.86063374596968 0.0 27 1.1665181300247768E-4 0.0 0.0 11.17413549341384 0.0 28 1.1665181300247768E-4 0.0 0.0 11.506301530938394 0.0 29 1.1665181300247768E-4 0.0 0.0 11.850424379295703 0.0 30 1.1665181300247768E-4 0.0 0.0 12.230301008338271 0.0 31 1.1665181300247768E-4 0.0 0.0 12.587897141097367 0.0 32 1.1665181300247768E-4 0.0 0.0 12.94963441321805 0.0 33 1.1665181300247768E-4 0.0 0.0 13.276026185998983 0.0 34 1.1665181300247768E-4 0.0 0.0 13.634263903729591 0.0 35 1.7497771950371652E-4 0.0 0.0 14.002067070126405 0.0 36 1.7497771950371652E-4 0.0 0.0 14.360246461950512 0.0 37 1.7497771950371652E-4 0.0 0.0 14.720233956876157 0.0 38 1.7497771950371652E-4 0.0 0.0 15.071064284481109 0.0 39 1.7497771950371652E-4 0.0 0.0 15.446041537377575 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAC 30 2.166129E-6 45.000004 25 ATTACGC 20 7.0342596E-4 45.0 11 ATAGCGC 20 7.0342596E-4 45.0 36 TATATCG 25 3.891611E-5 45.0 15 TACTCGA 20 7.0342596E-4 45.0 44 TATAGCG 20 7.0342596E-4 45.0 1 ATCGCTA 25 3.891611E-5 45.0 34 CGTTTTT 48325 0.0 44.343506 1 TAGGTCG 70 0.0 41.785713 1 TCGATGG 160 0.0 40.78125 2 GTTTTTT 54155 0.0 39.81904 2 TTGGACG 80 0.0 39.375 1 TCAGACG 110 0.0 38.863636 22 CGTAAGG 215 0.0 38.720932 2 CTATCGA 30 1.1401559E-4 37.500004 45 AACGGAT 30 1.1401559E-4 37.500004 13 TCAATCG 30 1.1401559E-4 37.500004 31 CCGTACT 30 1.1401559E-4 37.500004 26 AGTAACG 60 1.5643309E-10 37.500004 1 AAATGCG 30 1.1401559E-4 37.500004 1 >>END_MODULE