##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934965.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1256247 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30020051789178 33.0 31.0 34.0 30.0 34.0 2 32.48589489168929 34.0 31.0 34.0 31.0 34.0 3 32.56401567526132 34.0 31.0 34.0 31.0 34.0 4 36.02237617283862 37.0 35.0 37.0 35.0 37.0 5 35.88573186642436 37.0 35.0 37.0 35.0 37.0 6 35.86683271681445 37.0 35.0 37.0 35.0 37.0 7 36.1027871111334 37.0 35.0 37.0 35.0 37.0 8 36.110213994540885 37.0 36.0 37.0 35.0 37.0 9 37.93124282087838 39.0 39.0 39.0 35.0 39.0 10 37.31024472098242 39.0 37.0 39.0 34.0 39.0 11 37.19608245830637 39.0 37.0 39.0 34.0 39.0 12 37.21912012526199 39.0 37.0 39.0 34.0 39.0 13 37.181449985552206 39.0 37.0 39.0 34.0 39.0 14 38.369045259411564 40.0 38.0 41.0 34.0 41.0 15 38.401110609617376 40.0 38.0 41.0 34.0 41.0 16 38.51880720909184 40.0 38.0 41.0 34.0 41.0 17 38.53567491106446 40.0 38.0 41.0 34.0 41.0 18 38.122089843796644 39.0 38.0 40.0 34.0 41.0 19 37.676876442292 38.0 37.0 40.0 34.0 41.0 20 37.15972575456897 38.0 35.0 40.0 34.0 41.0 21 37.12414596810977 38.0 35.0 40.0 34.0 41.0 22 36.95436725421036 38.0 35.0 40.0 33.0 41.0 23 36.82365410623866 38.0 35.0 40.0 33.0 41.0 24 36.58440099757452 37.0 35.0 40.0 33.0 41.0 25 36.44429320030217 37.0 35.0 40.0 32.0 41.0 26 36.63973326901477 38.0 35.0 40.0 33.0 41.0 27 36.730371495414516 38.0 35.0 40.0 33.0 41.0 28 36.71658678587889 38.0 35.0 40.0 33.0 41.0 29 36.63019135568085 38.0 35.0 40.0 33.0 41.0 30 36.31646881544792 38.0 35.0 40.0 32.0 41.0 31 35.85805976054072 38.0 35.0 40.0 30.0 41.0 32 35.18470810278552 38.0 35.0 40.0 24.0 41.0 33 34.32401828621282 38.0 34.0 40.0 18.0 41.0 34 33.62075770131192 38.0 34.0 40.0 12.0 41.0 35 33.1695510516642 38.0 33.0 40.0 10.0 41.0 36 32.98263080429247 38.0 33.0 40.0 10.0 41.0 37 32.799678725600934 38.0 33.0 40.0 8.0 41.0 38 32.651530312112186 38.0 32.0 40.0 8.0 41.0 39 32.60660045357322 38.0 32.0 40.0 8.0 41.0 40 32.518727606911696 38.0 32.0 40.0 8.0 41.0 41 32.430276848422324 38.0 31.0 40.0 8.0 41.0 42 32.35201914910046 38.0 31.0 40.0 8.0 41.0 43 32.272124032933014 38.0 31.0 40.0 8.0 41.0 44 32.14180411973123 38.0 31.0 40.0 8.0 41.0 45 32.09304460030551 38.0 30.0 40.0 8.0 41.0 46 32.012969583210946 37.0 30.0 40.0 7.0 41.0 47 31.980873188154877 37.0 30.0 40.0 8.0 41.0 48 31.941802846096348 37.0 30.0 40.0 7.0 41.0 49 31.854818359765236 37.0 30.0 40.0 7.0 41.0 50 31.75500040995123 37.0 29.0 40.0 7.0 41.0 51 31.147858661553023 36.0 27.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 5.0 10 8.0 11 9.0 12 8.0 13 12.0 14 19.0 15 43.0 16 78.0 17 205.0 18 365.0 19 797.0 20 1383.0 21 2313.0 22 3904.0 23 7234.0 24 14299.0 25 30566.0 26 50987.0 27 57369.0 28 49196.0 29 37786.0 30 31358.0 31 29222.0 32 31189.0 33 38962.0 34 65946.0 35 85928.0 36 91972.0 37 130692.0 38 243791.0 39 250513.0 40 85.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.77647389406701 16.37886498435419 19.45111112703155 32.39354999454725 2 48.22156789230144 18.053137639333666 19.53923074045152 14.186063727913382 3 23.379797125883684 18.29504866479283 44.41817572499676 13.906978484326729 4 21.7201712720508 20.013102518851785 43.74099997850741 14.525726230590003 5 19.104045621601486 21.779634100618747 43.68551725894669 15.43080301883308 6 19.204821981664434 25.161373519697953 42.99544595927393 12.638358539363676 7 60.73351816959563 3.764864712114736 30.818302451667545 4.683314666622089 8 60.376104380746774 3.2159280778381962 30.43231148014682 5.9756560612682055 9 56.77951867745754 4.391970687293183 32.504117422767976 6.324393212481303 10 30.062479751195426 17.42841972955955 39.5682536953322 12.940846823912814 11 21.360369417797614 19.201797098818943 42.37693701955109 17.06089646383235 12 18.53345719432564 16.8637218636144 48.16385631169666 16.438964630363294 13 16.79080626660203 20.048923499916814 48.7381860414393 14.42208419204185 14 15.124016216556138 22.266799443103146 45.80492530529426 16.80425903504645 15 13.581405567535684 21.097443416780298 50.0982688913884 15.22288212429562 16 15.175916838010359 20.42583982290107 46.508608577771724 17.88963476131684 17 15.186265121429146 20.683432477848704 43.86000523782345 20.2702971628987 18 15.720316148018663 20.145003331351237 47.49097908293513 16.643701437694975 19 15.63323136294057 22.098202025557075 44.34589694542554 17.922669666076814 20 16.246168150053293 21.67392240538684 45.91477631389368 16.16513313066618 21 15.880316530109125 21.920131948573808 46.29408070228227 15.905470819034791 22 15.342205792332239 20.019789101983925 44.26303107589511 20.374974029788728 23 14.15923779320468 20.907433012775353 44.84205733426627 20.091271859753697 24 16.54602956265766 18.84923904295891 45.4932827700285 19.111448624354924 25 14.220770278456389 21.411872028351112 43.65837291551741 20.70898477767509 26 13.415196215393948 21.337762398636574 44.91616696398081 20.33087442198867 27 15.26363844052961 20.073122562680748 44.900962947573205 19.76227604921644 28 12.914976115365848 19.459946969027587 46.72671855136768 20.89835836423888 29 15.033190129011253 17.734410510035048 44.92699286048046 22.305406500473236 30 15.65090304693265 19.63841505691158 44.85956981389806 19.851112082257707 31 15.795460606075078 20.15861530415595 43.85976643128302 20.18615765848595 32 16.487840368972027 20.736447529824947 40.87333143880144 21.902380662401583 33 15.863361265738346 20.112127630951555 41.943821557384815 22.080689545925285 34 14.800433354268709 20.6233328318396 42.12810060441935 22.44813320947234 35 15.652654294895829 20.71583056516752 37.279770618357695 26.351744521578958 36 16.698388135454252 21.791017212379412 39.17454131233746 22.336053339828872 37 16.41365113707734 22.647695875094627 40.49657432017748 20.44207866765055 38 17.093055744610734 24.303341619920285 36.82603819153399 21.777564443934992 39 18.857438067513794 21.451752720603512 39.92582668854134 19.76498252334135 40 17.975207104972192 21.297324491123163 38.567256280014995 22.16021212388965 41 15.381768075864061 22.57470067590211 35.94818534890034 26.095345899333488 42 17.034150131303797 21.164468452461975 36.869660186253185 24.931721229981047 43 19.2306926902114 20.75825852718454 36.81123218602711 23.199816596576948 44 17.225672976731488 21.67392240538684 36.49433590687182 24.606068711009858 45 18.186550893255866 20.229461244484565 35.996981485328924 25.58700637693065 46 19.48573807539441 20.532427142114567 37.29776071107035 22.684074071420667 47 14.775517871883476 20.298794743390435 40.87197820173899 24.053709182987106 48 15.93030669923988 19.64764890980834 39.11547649467024 25.306567896281546 49 17.41990229628409 18.2295360705339 41.52774096176946 22.82282067141255 50 17.540977212283888 18.156620473521528 39.76646312389204 24.535939190302543 51 16.15343161018494 18.292979008109075 36.57529132407878 28.9782980576272 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 495.0 1 606.0 2 717.0 3 36792.5 4 72868.0 5 50610.0 6 28352.0 7 27612.5 8 26873.0 9 27208.0 10 27543.0 11 27230.0 12 26917.0 13 25681.5 14 24446.0 15 22826.5 16 21207.0 17 19391.0 18 17575.0 19 15926.5 20 14278.0 21 13267.0 22 12256.0 23 11344.0 24 10432.0 25 10125.0 26 9730.5 27 9643.0 28 10588.5 29 11534.0 30 12255.5 31 12977.0 32 14519.0 33 16061.0 34 18047.5 35 20034.0 36 22471.5 37 24909.0 38 28046.0 39 31183.0 40 35069.5 41 38956.0 42 46087.0 43 53218.0 44 64180.5 45 75143.0 46 94179.5 47 113216.0 48 128479.0 49 143742.0 50 140823.5 51 137905.0 52 112754.0 53 87603.0 54 72301.5 55 57000.0 56 47563.0 57 38126.0 58 32586.5 59 27047.0 60 23606.5 61 20166.0 62 18089.0 63 16012.0 64 13393.0 65 10774.0 66 8624.0 67 6474.0 68 5567.5 69 4661.0 70 3605.5 71 2550.0 72 1949.5 73 1349.0 74 1214.5 75 812.5 76 545.0 77 373.0 78 201.0 79 200.5 80 200.0 81 128.0 82 56.0 83 68.0 84 80.0 85 46.5 86 13.0 87 10.5 88 8.0 89 5.0 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1256247.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.031898955629494 #Duplication Level Percentage of deduplicated Percentage of total 1 73.42603772994657 25.722535344677272 2 11.24257207322437 7.876972977411563 3 4.821715880232291 5.0674159052715515 4 2.621423188774667 3.6733372907639286 5 1.5738600677436765 2.756765343174833 6 1.032607054178303 2.1704511589706725 7 0.7067902952912296 1.7332144345223324 8 0.49122133532780216 1.3766732947242366 9 0.4157005175713771 1.310650067462703 >10 3.0840791291331118 24.085679294535208 >50 0.4922883995941978 11.259066510873138 >100 0.08246459818992839 5.328993223781994 >500 0.005543838475491686 1.3391670715506911 >1k 0.0030029125075579964 1.9544119349865428 >5k 4.619865396243071E-4 1.2203745607623404 >10k+ 2.3099326981215355E-4 3.1242915865309464 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38609 3.0733605731993787 No Hit GCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 8515 0.6778125639305009 No Hit CCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 6566 0.5226679148288513 No Hit CTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGCT 4290 0.341493352819947 No Hit TCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 3277 0.2608563443335586 No Hit ACTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 2199 0.17504519413777705 No Hit CGCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTG 2079 0.16549293252043587 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGC 1573 0.1252142293673139 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTC 1559 0.12409979884529078 No Hit GCCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTG 1506 0.11988088329763175 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCC 1472 0.11717440917271842 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCG 1420 0.11303509580520392 No Hit ACCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTG 1358 0.10809976063624431 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.96021801445098E-5 0.0 0.0 0.3623491240178086 0.0 2 7.96021801445098E-5 0.0 0.0 2.1053184604619952 0.0 3 7.96021801445098E-5 0.0 0.0 2.983250905275794 0.0 4 7.96021801445098E-5 0.0 0.0 3.9694423150861256 0.0 5 7.96021801445098E-5 0.0 0.0 6.349627103587113 0.0 6 7.96021801445098E-5 0.0 0.0 7.516913473226205 0.0 7 7.96021801445098E-5 0.0 0.0 8.758389074759979 0.0 8 7.96021801445098E-5 0.0 0.0 10.634214449865352 0.0 9 1.592043602890196E-4 0.0 0.0 11.246912430437645 0.0 10 1.592043602890196E-4 0.0 0.0 12.854956071536888 0.0 11 1.592043602890196E-4 0.0 0.0 15.141210287467354 0.0 12 1.592043602890196E-4 0.0 0.0 16.992677395448506 0.0 13 1.592043602890196E-4 0.0 0.0 17.6488381663797 0.0 14 1.592043602890196E-4 0.0 0.0 17.88724669591251 0.0 15 1.592043602890196E-4 0.0 0.0 18.36087966777234 0.0 16 1.592043602890196E-4 0.0 0.0 19.431130979815276 0.0 17 1.592043602890196E-4 0.0 0.0 20.77569140463619 0.0 18 1.592043602890196E-4 0.0 0.0 22.21633166089153 0.0 19 1.592043602890196E-4 0.0 0.0 23.16686129399712 0.0 20 1.592043602890196E-4 0.0 0.0 24.020753880407277 0.0 21 1.592043602890196E-4 0.0 0.0 25.058049889870382 0.0 22 1.592043602890196E-4 0.0 0.0 26.110231507020515 0.0 23 2.388065404335294E-4 0.0 0.0 27.194174394048304 0.0 24 2.388065404335294E-4 0.0 0.0 28.008982310007507 0.0 25 2.388065404335294E-4 0.0 0.0 28.730018857756477 0.0 26 2.388065404335294E-4 0.0 0.0 29.388965704992728 0.0 27 2.388065404335294E-4 0.0 0.0 30.003176126987768 0.0 28 2.388065404335294E-4 0.0 0.0 30.6565508216139 0.0 29 2.388065404335294E-4 0.0 0.0 31.341129570856687 0.0 30 2.388065404335294E-4 0.0 0.0 32.09185773179956 0.0 31 2.388065404335294E-4 0.0 0.0 32.794665380295434 0.0 32 3.184087205780392E-4 0.0 0.0 33.423522603437064 0.0 33 3.98010900722549E-4 0.0 0.0 34.05397187018158 0.0 34 3.98010900722549E-4 0.0 0.0 34.664440989709824 0.0 35 3.98010900722549E-4 0.0 0.0 35.29138776052798 0.0 36 3.98010900722549E-4 0.0 0.0 35.87009561017857 0.0 37 3.98010900722549E-4 0.0 0.0 36.43821636986994 0.0 38 3.98010900722549E-4 0.0 0.0 37.03594914057506 0.0 39 3.98010900722549E-4 0.0 0.0 37.585841001013335 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGACG 25 3.891014E-5 45.0 1 AGTCCGT 20 7.0335384E-4 45.0 13 GTCGATA 20 7.0335384E-4 45.0 18 GTCGACG 20 7.0335384E-4 45.0 1 ACTTCGC 25 3.891014E-5 45.0 38 CGTCTAA 25 3.891014E-5 45.0 29 CATTACG 20 7.0335384E-4 45.0 24 TACGAAG 20 7.0335384E-4 45.0 1 GTCGTTG 20 7.0335384E-4 45.0 29 GTCCGTT 20 7.0335384E-4 45.0 14 CGAATTA 20 7.0335384E-4 45.0 16 AATTCGT 35 1.2120472E-7 45.0 31 CGTCGAA 20 7.0335384E-4 45.0 31 CGCGTTA 20 7.0335384E-4 45.0 35 CGGTAAG 25 3.891014E-5 45.0 15 TACAGCG 55 1.8189894E-12 45.0 1 TATACGA 25 3.891014E-5 45.0 41 TACGTAG 40 6.8157533E-9 45.0 1 ATTTCGT 20 7.0335384E-4 45.0 12 AGGTCCG 25 3.891014E-5 45.0 12 >>END_MODULE