##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934964.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1005244 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.513489262308454 34.0 31.0 34.0 31.0 34.0 2 32.68529630617044 34.0 31.0 34.0 31.0 34.0 3 32.74981099116234 34.0 31.0 34.0 31.0 34.0 4 36.1635642689735 37.0 37.0 37.0 35.0 37.0 5 36.04717859544549 37.0 35.0 37.0 35.0 37.0 6 36.032343391256255 37.0 35.0 37.0 35.0 37.0 7 36.22895635288547 37.0 37.0 37.0 35.0 37.0 8 36.24362940738766 37.0 37.0 37.0 35.0 37.0 9 38.05837388733482 39.0 39.0 39.0 35.0 39.0 10 37.48666293954503 39.0 37.0 39.0 34.0 39.0 11 37.40817154840019 39.0 37.0 39.0 34.0 39.0 12 37.39303790920413 39.0 37.0 39.0 35.0 39.0 13 37.357568908643074 39.0 37.0 39.0 34.0 39.0 14 38.601846914778896 40.0 38.0 41.0 34.0 41.0 15 38.66508927185838 40.0 38.0 41.0 34.0 41.0 16 38.76605779293386 40.0 38.0 41.0 35.0 41.0 17 38.78311335357386 40.0 38.0 41.0 35.0 41.0 18 38.28194945704725 39.0 38.0 41.0 35.0 41.0 19 37.79750190003621 38.0 37.0 40.0 35.0 41.0 20 37.23712849815567 38.0 35.0 40.0 34.0 41.0 21 37.188913338453155 38.0 35.0 40.0 34.0 41.0 22 37.01875365582883 38.0 35.0 40.0 34.0 41.0 23 36.90617700777125 38.0 35.0 40.0 33.0 41.0 24 36.693752959480484 37.0 35.0 40.0 33.0 41.0 25 36.53736008372097 37.0 35.0 40.0 33.0 41.0 26 36.6995873638639 37.0 35.0 40.0 33.0 41.0 27 36.77022295084576 38.0 35.0 40.0 33.0 41.0 28 36.73234060586285 38.0 35.0 40.0 33.0 41.0 29 36.59659744300886 38.0 35.0 40.0 33.0 41.0 30 36.2714226595732 38.0 35.0 40.0 33.0 41.0 31 35.71877375045263 38.0 35.0 40.0 30.0 41.0 32 34.94864430924233 38.0 35.0 40.0 23.0 41.0 33 33.99649139910311 38.0 34.0 40.0 16.0 41.0 34 33.22744726653429 38.0 33.0 40.0 10.0 41.0 35 32.76395581570246 38.0 33.0 40.0 10.0 41.0 36 32.58560906605759 38.0 33.0 40.0 8.0 41.0 37 32.389649677093324 38.0 31.0 40.0 8.0 41.0 38 32.26991556278874 38.0 31.0 40.0 8.0 41.0 39 32.19769031200385 37.0 31.0 40.0 8.0 41.0 40 32.06640278380174 37.0 31.0 40.0 7.0 41.0 41 31.9348964032613 37.0 30.0 40.0 7.0 41.0 42 31.7999460827421 37.0 30.0 40.0 7.0 41.0 43 31.697945971326366 37.0 29.0 40.0 7.0 41.0 44 31.591433522607446 37.0 29.0 40.0 7.0 41.0 45 31.569874577714465 37.0 29.0 40.0 7.0 41.0 46 31.52190711906761 37.0 28.0 40.0 7.0 41.0 47 31.501151959126343 37.0 28.0 40.0 7.0 41.0 48 31.493630402171014 37.0 28.0 40.0 7.0 41.0 49 31.417626964199737 36.0 27.0 40.0 7.0 41.0 50 31.336223842171652 36.0 27.0 40.0 7.0 41.0 51 30.78106907377711 35.0 26.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 6.0 10 5.0 11 9.0 12 7.0 13 16.0 14 15.0 15 37.0 16 71.0 17 151.0 18 329.0 19 668.0 20 1043.0 21 1764.0 22 3029.0 23 5367.0 24 10979.0 25 24336.0 26 42140.0 27 50849.0 28 44674.0 29 34283.0 30 26887.0 31 23583.0 32 24411.0 33 30119.0 34 52283.0 35 68643.0 36 69611.0 37 89731.0 38 173418.0 39 226643.0 40 131.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.04568443084465 15.688031960399664 19.167983096641215 36.09830051211447 2 50.77811954112633 17.976033679385303 18.568228211260152 12.67761856822821 3 22.374070374953742 17.74564185411701 46.40714095284329 13.473146818085958 4 20.840412874884105 18.39861764904839 46.885830703789324 13.875138772278174 5 18.500682421382272 21.610673627497405 45.323921356407006 14.564722594713322 6 19.315907381690415 24.4662987294627 44.045127352165245 12.172666536681641 7 59.825873121351634 3.6338441214272357 32.58671526514956 3.953567492071577 8 60.491681621576454 3.1749505592672027 32.05798791139266 4.275379907763687 9 56.83744444134956 4.2897047880912496 33.770308502214384 5.1025422683448 10 28.416185523116777 18.320626633931663 40.506285041243714 12.756902801707845 11 21.13417239993474 19.592457154680854 44.73033412783364 14.543036317550765 12 19.84702221550191 16.68012940141896 48.3804926963006 15.092355686778532 13 16.204722435547986 19.435082427748885 48.98472410678402 15.375471029919105 14 13.731591533995728 21.965015458933355 48.068130722491254 16.23526228457966 15 12.915172833660286 20.08666552598175 52.12296716021185 14.875194480146114 16 14.996955962930391 19.60359872826896 49.140905093688694 16.258540215111953 17 14.824659485657213 19.838864991982046 46.52084469044331 18.815630831917424 18 15.334684912319796 19.12739593571312 49.53623199939517 16.001687152571915 19 15.9842784438405 20.407881071660213 47.2268424382538 16.380998046245487 20 16.5906983777073 21.017086398924043 47.213412862946704 15.178802360421948 21 16.194078253637922 20.54018725801895 47.80222513141088 15.463509356932247 22 14.928614346367647 19.4673134084859 47.333781649032474 18.270290596113977 23 14.412520741232973 19.791513304232605 47.94199219294022 17.8539737615942 24 15.710713020918304 18.25566728077959 48.81143284615476 17.22218685214734 25 14.10334207416309 21.081846795404896 46.665088277075014 18.149722853356995 26 13.696077768183645 21.220818030249372 46.68776933759366 18.39533486397332 27 14.462558344043835 20.756552637966504 47.84758725244816 16.9333017655415 28 12.012804851359471 19.935856369199918 48.478379378538946 19.57295940090167 29 13.342034371754519 19.429511640954832 47.64087127105459 19.587582716236057 30 14.405258822733586 20.544066913107663 46.87150582346177 18.179168440696987 31 14.918169121128798 22.335373302402203 43.45969734711175 19.28676022935725 32 16.433323650775332 23.345575800502168 41.42536538392669 18.79573516479581 33 15.801337784657257 23.533390898130204 40.51941618154398 20.14585513566855 34 15.006306926477553 24.03456275292367 39.1922757061967 21.766854614402074 35 16.15707231279172 25.11907556772286 37.103927006776466 21.619925112708955 36 16.88376155440868 26.204782122549354 36.289199438146355 20.622256884895606 37 16.611190914842567 27.146841960757783 37.39808444516953 18.843882679230116 38 16.652474424119916 27.804891150805176 34.411048461865974 21.13158596320893 39 17.17582994775398 27.08218104261254 35.555049321358794 20.186939688274688 40 18.550521067521917 25.214873204913435 35.90302453931582 20.331581188248823 41 17.381849580798296 26.097345520092635 34.1537974859835 22.36700741312557 42 17.778967096545713 25.83551854077219 34.7527565446797 21.632757818002396 43 18.0179140586763 25.816816613677872 34.89859178468113 21.266677542964693 44 16.4082551102021 25.510423340005012 34.76718090334287 23.314140646450017 45 16.895400519674826 25.113305824257594 34.22114431919017 23.770149336877413 46 18.235871091993587 24.584677948836305 35.4848176164195 21.694633342750617 47 15.51901826820155 25.007361396834998 37.93516797911751 21.538452355845944 48 16.39850623331251 23.741400097886682 37.07209393938189 22.787999729418928 49 17.019648960849306 22.884493714958758 38.36600865063606 21.729848673555875 50 16.200643823788056 22.62734221741189 38.02977187628078 23.142242082519267 51 15.773185415680175 23.104340836652593 35.72306823020083 25.399405517466406 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 338.0 1 543.5 2 749.0 3 37446.0 4 74143.0 5 50687.5 6 27232.0 7 26596.0 8 25960.0 9 25782.5 10 25605.0 11 24816.5 12 24028.0 13 22554.0 14 21080.0 15 19421.0 16 17762.0 17 16144.5 18 14527.0 19 13063.0 20 11599.0 21 10522.5 22 9446.0 23 9026.0 24 8606.0 25 8681.5 26 10019.5 27 11282.0 28 11943.0 29 12604.0 30 13218.5 31 13833.0 32 15245.0 33 16657.0 34 18735.5 35 20814.0 36 22223.0 37 23632.0 38 25631.0 39 27630.0 40 31526.5 41 35423.0 42 40957.5 43 46492.0 44 51414.5 45 56337.0 46 66004.0 47 75671.0 48 83070.5 49 90470.0 50 88294.0 51 86118.0 52 72510.5 53 58903.0 54 50718.0 55 42533.0 56 36789.5 57 31046.0 58 27877.5 59 24709.0 60 22420.0 61 20131.0 62 17207.0 63 14283.0 64 12409.0 65 10535.0 66 8601.0 67 6667.0 68 5307.5 69 3948.0 70 3185.5 71 2423.0 72 1940.5 73 1458.0 74 1189.5 75 725.0 76 529.0 77 344.0 78 159.0 79 122.0 80 85.0 81 80.0 82 75.0 83 43.5 84 12.0 85 19.5 86 27.0 87 14.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1005244.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.25315450129015 #Duplication Level Percentage of deduplicated Percentage of total 1 75.77736305567065 25.95613724446243 2 10.49367570371722 7.188829903317212 3 4.181812813816857 4.297208412214312 4 2.1759540891602107 2.981331664148751 5 1.303395130159153 2.232269738478533 6 0.8386621672746042 1.7236094874026313 7 0.5624028401078625 1.3484849961925294 8 0.4034402069058873 1.1055279791343857 9 0.3003259806797646 0.9258400995277912 >10 3.2670547731072106 28.054758191255825 >50 0.6199041293164511 13.55662220057488 >100 0.06831947248817019 3.9443303109305305 >500 0.005323595258780322 1.235522087373733 >1k 0.0020702870450812366 1.5524057450733917 >5k 0.0 0.0 >10k+ 2.9575529215446233E-4 3.8971219399130974 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38469 3.826832092506894 No Hit GCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 4074 0.40527473926728236 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 3621 0.3602110532368261 Illumina Single End Adapter 2 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGCT 2532 0.2518791457596365 Illumina Single End Adapter 2 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 1696 0.16871525719128888 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCC 1248 0.12414896283887294 No Hit ACTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 1077 0.10713816744989275 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTG 1076 0.1070386891142847 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.947833560807128E-5 0.0 0.0 0.2675967227857117 0.0 2 9.947833560807128E-5 0.0 0.0 1.3753874681171934 0.0 3 9.947833560807128E-5 0.0 0.0 1.931471364166312 0.0 4 9.947833560807128E-5 0.0 0.0 2.5573890518122964 0.0 5 9.947833560807128E-5 0.0 0.0 4.0813971533279485 0.0 6 9.947833560807128E-5 0.0 0.0 4.813856138410177 0.0 7 9.947833560807128E-5 0.0 0.0 5.594164202919888 0.0 8 9.947833560807128E-5 0.0 0.0 6.771092391498979 0.0 9 9.947833560807128E-5 0.0 0.0 7.139162233248843 0.0 10 9.947833560807128E-5 0.0 0.0 8.148568904663943 0.0 11 9.947833560807128E-5 0.0 0.0 9.641738722141092 0.0 12 9.947833560807128E-5 0.0 0.0 10.79409576182499 0.0 13 9.947833560807128E-5 0.0 0.0 11.20882094297504 0.0 14 9.947833560807128E-5 0.0 0.0 11.358038446387146 0.0 15 9.947833560807128E-5 0.0 0.0 11.676369120332973 0.0 16 9.947833560807128E-5 0.0 0.0 12.397984966833922 0.0 17 9.947833560807128E-5 0.0 0.0 13.286028068807175 0.0 18 9.947833560807128E-5 0.0 0.0 14.309660142214229 0.0 19 9.947833560807128E-5 0.0 0.0 14.91458790104691 0.0 20 9.947833560807128E-5 0.0 0.0 15.481713892348525 0.0 21 9.947833560807128E-5 0.0 0.0 16.257246996749046 0.0 22 9.947833560807128E-5 0.0 0.0 17.046607589799095 0.0 23 1.9895667121614256E-4 0.0 0.0 17.79468467357179 0.0 24 1.9895667121614256E-4 0.0 0.0 18.387873988802717 0.0 25 1.9895667121614256E-4 0.0 0.0 18.926847611127247 0.0 26 1.9895667121614256E-4 0.0 0.0 19.406532145429367 0.0 27 1.9895667121614256E-4 0.0 0.0 19.890693204833852 0.0 28 1.9895667121614256E-4 0.0 0.0 20.364607995670703 0.0 29 1.9895667121614256E-4 0.0 0.0 20.903482139659626 0.0 30 1.9895667121614256E-4 0.0 0.0 21.494781366514 0.0 31 1.9895667121614256E-4 0.0 0.0 22.01525201841543 0.0 32 1.9895667121614256E-4 0.0 0.0 22.508565084695856 0.0 33 2.984350068242138E-4 0.0 0.0 22.978898655450816 0.0 34 2.984350068242138E-4 0.0 0.0 23.455598839684694 0.0 35 3.979133424322851E-4 0.0 0.0 23.981142886702134 0.0 36 3.979133424322851E-4 0.0 0.0 24.435559923759804 0.0 37 3.979133424322851E-4 0.0 0.0 24.890573830831123 0.0 38 3.979133424322851E-4 0.0 0.0 25.360211053236824 0.0 39 3.979133424322851E-4 0.0 0.0 25.85471785954455 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCGCG 45 3.8380676E-10 45.000004 1 CTATGCG 25 3.8904553E-5 45.0 1 TAACGCG 40 6.8139343E-9 45.0 1 ATCGTTA 20 7.032865E-4 45.0 28 CCCCGTA 20 7.032865E-4 45.0 32 CCGTAGG 25 3.8904553E-5 45.0 2 CGTAGCA 20 7.032865E-4 45.0 24 ACAATCG 20 7.032865E-4 45.0 12 CGGGCCG 25 3.8904553E-5 45.0 6 TATTACG 35 1.2117198E-7 45.0 1 TATAGCG 20 7.032865E-4 45.0 1 CGTCGAC 20 7.032865E-4 45.0 26 CCGCGTG 20 7.032865E-4 45.0 39 ACCGTAG 20 7.032865E-4 45.0 22 GACGCGA 20 7.032865E-4 45.0 14 ATCGGCA 20 7.032865E-4 45.0 27 CAATCGT 20 7.032865E-4 45.0 13 ATACCGG 40 6.8139343E-9 45.0 2 GCGTACG 70 0.0 45.0 1 CACCCGC 25 3.8904553E-5 45.0 28 >>END_MODULE