SRR2934963.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934963.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	498036
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16323	3.2774739175481296	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCG	12463	2.50242954324587	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGC	11932	2.3958107446048076	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC	8789	1.764731866772683	No Hit
GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	4352	0.8738324137210965	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGCGAAAAT	3243	0.6511577476327013	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCT	2162	0.4341051650884675	No Hit
CCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	2115	0.4246680962821965	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTA	1825	0.36643937386052416	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTC	1431	0.2873286268462521	No Hit
CTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGCT	1389	0.2788955015300099	No Hit
GAACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCT	1323	0.26564344746162927	No Hit
TCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	762	0.15300098788039418	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCC	674	0.13533158245588672	No Hit
CGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTG	656	0.13171738589178292	No Hit
GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGGCGAAAA	611	0.12268189448152343	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATG	574	0.11525271265531006	No Hit
ACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	567	0.11384719176926969	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAGAC	20	7.02943E-4	45.000004	21
GTCATCA	30	2.1630149E-6	45.000004	10
CGGGTGC	20	7.02943E-4	45.000004	6
CGGGTCG	20	7.02943E-4	45.000004	8
TGTCAAG	20	7.02943E-4	45.000004	1
CGTGGAA	20	7.02943E-4	45.000004	6
CCGGGAC	40	6.8012014E-9	45.000004	5
CTGTACG	20	7.02943E-4	45.000004	35
ATCTACC	20	7.02943E-4	45.000004	15
GTACACG	40	6.8012014E-9	45.000004	1
ACGCACG	20	7.02943E-4	45.000004	43
GACGTAG	30	2.1630149E-6	45.000004	1
ATCAGGC	20	7.02943E-4	45.000004	12
TAGAACG	60	0.0	45.000004	1
GACCGAG	20	7.02943E-4	45.000004	30
ACCGACG	20	7.02943E-4	45.000004	17
TAAGTTG	20	7.02943E-4	45.000004	11
AAGCGAT	20	7.02943E-4	45.000004	36
CGACACT	20	7.02943E-4	45.000004	12
CCTCGGT	20	7.02943E-4	45.000004	34