##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934963.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 498036 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.280451613939555 33.0 31.0 34.0 30.0 34.0 2 32.45028672626075 34.0 31.0 34.0 30.0 34.0 3 32.548127043025005 34.0 31.0 34.0 31.0 34.0 4 36.045095133685116 37.0 35.0 37.0 35.0 37.0 5 35.89778048173224 37.0 35.0 37.0 35.0 37.0 6 35.807736790111555 37.0 35.0 37.0 35.0 37.0 7 36.042035113927504 37.0 35.0 37.0 35.0 37.0 8 35.82826743448265 37.0 35.0 37.0 35.0 37.0 9 37.76894642154382 39.0 38.0 39.0 35.0 39.0 10 37.35439405986716 39.0 37.0 39.0 34.0 39.0 11 37.25963785750427 39.0 37.0 39.0 34.0 39.0 12 37.15207535198259 39.0 37.0 39.0 34.0 39.0 13 36.90509722188757 39.0 37.0 39.0 33.0 39.0 14 38.04440843633794 40.0 37.0 41.0 33.0 41.0 15 38.04667935651238 40.0 37.0 41.0 33.0 41.0 16 38.292701732404886 40.0 37.0 41.0 34.0 41.0 17 38.211571051088676 40.0 37.0 41.0 34.0 41.0 18 37.880175328691095 39.0 37.0 40.0 34.0 41.0 19 37.49686167265017 38.0 37.0 40.0 34.0 41.0 20 36.82694423696279 38.0 35.0 40.0 33.0 41.0 21 36.86586311029725 38.0 35.0 40.0 33.0 41.0 22 36.73439269450401 38.0 35.0 40.0 33.0 41.0 23 36.43738806030086 37.0 35.0 40.0 32.0 41.0 24 36.26896449252664 37.0 35.0 40.0 32.0 41.0 25 36.15714526660723 37.0 35.0 40.0 32.0 41.0 26 36.36759792464802 37.0 35.0 40.0 32.0 41.0 27 36.35375354392052 37.0 35.0 40.0 32.0 41.0 28 36.32693419752789 37.0 35.0 40.0 32.0 41.0 29 36.255808817033305 37.0 35.0 40.0 32.0 41.0 30 35.92708559220618 37.0 35.0 40.0 31.0 41.0 31 35.488398429029225 37.0 35.0 40.0 29.0 41.0 32 34.69622276301312 37.0 35.0 40.0 23.0 41.0 33 33.824932334208775 37.0 33.0 40.0 17.0 41.0 34 33.162709121428975 37.0 33.0 40.0 12.0 41.0 35 32.795048952284574 37.0 32.0 40.0 10.0 41.0 36 32.64440522371877 37.0 32.0 40.0 10.0 41.0 37 32.424198250728864 37.0 31.0 40.0 10.0 41.0 38 32.248066404838205 36.0 31.0 40.0 10.0 41.0 39 32.10225766812038 36.0 31.0 40.0 9.0 41.0 40 31.807533993526572 36.0 30.0 40.0 8.0 41.0 41 31.593541430739947 36.0 29.0 40.0 8.0 41.0 42 31.469933900360616 35.0 30.0 40.0 8.0 41.0 43 31.241518685396237 35.0 29.0 39.0 8.0 41.0 44 31.09326233444972 35.0 29.0 39.0 8.0 41.0 45 30.896188227357058 35.0 29.0 39.0 8.0 41.0 46 30.744648981198146 35.0 28.0 39.0 8.0 41.0 47 30.489789894706405 35.0 28.0 38.0 8.0 41.0 48 30.488518902248032 35.0 28.0 38.0 8.0 41.0 49 30.424517504758693 35.0 28.0 38.0 7.0 41.0 50 30.25736693732983 35.0 27.0 37.0 7.0 41.0 51 29.694869447188555 34.0 26.0 36.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 3.0 11 7.0 12 3.0 13 5.0 14 5.0 15 23.0 16 39.0 17 97.0 18 168.0 19 428.0 20 853.0 21 1664.0 22 2578.0 23 3795.0 24 6357.0 25 11550.0 26 18445.0 27 22002.0 28 19707.0 29 16346.0 30 14401.0 31 14269.0 32 15523.0 33 19892.0 34 33679.0 35 46451.0 36 46037.0 37 59787.0 38 71813.0 39 72057.0 40 50.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.53228280686537 13.30124729939201 15.919331132689205 31.247138761053417 2 43.96389016055065 27.607040454906873 15.781389297159244 12.647680087383243 3 20.3726236657591 27.60483177922881 39.61721642612181 12.40532812889028 4 18.938590784601917 17.070854315752275 51.287256342914965 12.703298556730838 5 25.760186010649832 19.62428418829161 39.17588286790513 15.439646933153425 6 16.731119838726517 32.248070420612166 39.90635215125011 11.114457589411208 7 54.282421351066986 3.5997397778473847 37.88922889108418 4.228609980001446 8 52.32754258728285 11.990498678810367 30.06469411849746 5.6172646154093275 9 49.57332401673774 4.080026343477178 30.537350713603033 15.809298926182045 10 34.477226545872185 14.344143796833963 37.775783276710925 13.40284638058293 11 27.387979985382582 16.69778891485756 39.73226835007911 16.181962749680746 12 21.971303279281017 14.141146423150133 44.6692608566449 19.21828944092395 13 18.111341348818158 20.091117911155017 48.962123220008195 12.835417520018632 14 15.093487217791484 26.05454224192629 41.93833377506847 16.91363676521376 15 10.855239380285763 17.804737006963354 55.33355018512718 16.006473427623703 16 12.000939691106668 19.098017010818495 45.09513368511513 23.805909612959706 17 12.592061618035643 19.972853368029618 46.19204234232063 21.243042671614102 18 13.579540434828004 18.920519801781396 47.25321061128111 20.246729152109484 19 14.427069529110344 20.535061722445764 43.34445702720286 21.693411721241034 20 17.393923330843553 19.720863552032384 47.74654844228128 15.138664674842783 21 15.998040302307464 25.058027933723665 43.54745440088668 15.396477363082187 22 13.976901268181416 17.897702174140022 45.497112658522674 22.628283899155885 23 14.395344914825433 23.306548121019365 43.97714221461902 18.320964749536177 24 16.7166630524701 18.354898039499155 43.06716783525689 21.861271072773857 25 12.535037627802007 26.740637223011994 41.86424274550434 18.86008240368166 26 13.959633440152922 20.086298982402877 45.695491892152376 20.258575685291827 27 18.86449975503779 21.2673381040728 41.38877510862669 18.47938703226273 28 12.539454979158132 19.82567525239139 47.54274791380543 20.092121854645047 29 20.82560296846011 16.233967022464242 42.85633970235083 20.084090306724814 30 18.076002537969142 24.109301335646418 41.69417471829346 16.120521408090983 31 19.582720927804413 20.983422885092644 36.04900047386133 23.384855713241613 32 24.885148864740703 25.199182388421722 34.11520452336779 15.80046422346979 33 18.112947658402202 25.63850805965834 33.03496132809676 23.213582953842693 34 21.225172477491586 25.11204009348722 33.49155482736188 20.171232601659316 35 20.92338706438892 26.136062453316626 31.743287633825666 21.197262848468785 36 22.183336144375104 27.390590238456657 30.390373386662812 20.035700230505427 37 22.858387747070495 24.90763719891735 34.37863929515135 17.855335758860804 38 17.21963874097455 29.55810423342891 29.145282670329053 24.07697435526749 39 22.483716036591733 29.173192299351854 31.603137122617643 16.73995454143877 40 18.698648290485025 29.580190990209545 32.807668521954234 18.913492197351196 41 16.543984772185144 32.74923901083456 28.877631335887365 21.829144881092933 42 19.327518492639086 25.83046205495185 34.05115292870395 20.790866523705116 43 21.998008176115782 27.00186331911749 29.308122304411725 21.692006200354992 44 20.81194933699572 23.35473740854075 33.389955746170955 22.443357508292575 45 18.124794191584545 23.163184990643245 31.811154213751617 26.90086660402059 46 24.314908962404324 26.764531078074675 30.704808487739843 18.215751471781154 47 15.695652523110779 25.02409464376069 40.001124416708834 19.279128416419695 48 19.266880305841344 25.229702270518594 32.231204169979684 23.27221325366038 49 17.37083263057289 21.328177079568544 39.37767550940093 21.923314780457638 50 19.327116915243074 22.567645712358143 35.27134584648499 22.83389152591379 51 18.218562513553238 21.932952637961915 32.20992056799107 27.638564280493778 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 345.0 1 414.5 2 484.0 3 15376.5 4 30269.0 5 20458.0 6 10647.0 7 10655.0 8 10663.0 9 10803.0 10 10943.0 11 10636.5 12 10330.0 13 9674.5 14 9019.0 15 8172.5 16 7326.0 17 6723.5 18 6121.0 19 5514.5 20 4908.0 21 4464.0 22 4020.0 23 3793.0 24 3566.0 25 3476.5 26 4056.0 27 4725.0 28 4560.5 29 4396.0 30 4393.0 31 4390.0 32 5012.0 33 5634.0 34 6507.0 35 7380.0 36 7528.0 37 7676.0 38 8612.5 39 9549.0 40 11793.0 41 14037.0 42 16724.0 43 19411.0 44 23487.0 45 27563.0 46 51626.0 47 75689.0 48 61853.5 49 48018.0 50 47311.5 51 46605.0 52 38337.5 53 30070.0 54 25625.5 55 21181.0 56 18621.0 57 16061.0 58 14079.0 59 12097.0 60 10847.5 61 9598.0 62 8295.5 63 6993.0 64 6332.5 65 5672.0 66 4515.0 67 3358.0 68 2763.0 69 2168.0 70 1720.5 71 1273.0 72 1290.0 73 1307.0 74 918.0 75 483.5 76 438.0 77 269.0 78 100.0 79 64.0 80 28.0 81 37.5 82 47.0 83 26.5 84 6.0 85 5.5 86 5.0 87 3.0 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 498036.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.807614060700274 #Duplication Level Percentage of deduplicated Percentage of total 1 76.63027323561622 25.906867029157226 2 10.260565766742245 6.937704949729101 3 4.101638103863028 4.159997940961912 4 2.0807680163779447 2.813832081902177 5 1.219494203097585 2.06140946837922 6 0.7634581206159299 1.5486418495974552 7 0.5234839675209082 1.2388420758637715 8 0.36543589808855015 0.9883612645202482 9 0.2937283377671106 0.8937228853729339 >10 3.304595430283825 27.65413816063349 >50 0.3999407953795871 8.449023494373925 >100 0.04577635609766359 2.8508225422065685 >500 0.0036139228498155464 0.7827544180172893 >1k 0.004818563799754062 3.632762439497513 >5k 6.023204749692578E-4 1.7897056659609667 >10k+ 0.0018069614249077732 8.291413733826218 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16323 3.2774739175481296 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCG 12463 2.50242954324587 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGC 11932 2.3958107446048076 No Hit GAATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC 8789 1.764731866772683 No Hit GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 4352 0.8738324137210965 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGCGAAAAT 3243 0.6511577476327013 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCT 2162 0.4341051650884675 No Hit CCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 2115 0.4246680962821965 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTA 1825 0.36643937386052416 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTC 1431 0.2873286268462521 No Hit CTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGCT 1389 0.2788955015300099 No Hit GAACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCT 1323 0.26564344746162927 No Hit TCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 762 0.15300098788039418 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCC 674 0.13533158245588672 No Hit CGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTG 656 0.13171738589178292 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGGCGAAAA 611 0.12268189448152343 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATG 574 0.11525271265531006 No Hit ACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 567 0.11384719176926969 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.30258856789469035 0.0 2 0.0 0.0 0.0 1.9976467564593725 0.0 3 0.0 0.0 0.0 2.585756852918263 0.0 4 0.0 0.0 0.0 3.443726959496904 0.0 5 0.0 0.0 0.0 6.812961312033668 0.0 6 0.0 0.0 0.0 7.584592278469829 0.0 7 0.0 0.0 0.0 8.813218321567115 0.0 8 0.0 0.0 0.0 10.258495369812623 0.0 9 0.0 0.0 0.0 10.653647527487973 0.0 10 0.0 0.0 0.0 14.281296934358158 0.0 11 0.0 0.0 0.0 15.824960444626493 0.0 12 0.0 0.0 0.0 19.568264141548 0.0 13 0.0 0.0 0.0 20.154968717120852 0.0 14 0.0 0.0 0.0 20.42382478375057 0.0 15 0.0 0.0 0.0 21.146061730477314 0.0 16 0.0 0.0 0.0 22.016480736332312 0.0 17 0.0 0.0 0.0 22.952356857737193 0.0 18 0.0 0.0 0.0 24.009509352737552 0.0 19 0.0 0.0 0.0 25.313431157587 0.0 20 0.0 0.0 0.0 25.995911942108602 0.0 21 0.0 0.0 0.0 26.73019621071569 0.0 22 0.0 0.0 0.0 27.42793693628573 0.0 23 0.0 0.0 0.0 28.162020416194814 0.0 24 0.0 0.0 0.0 28.703949112112376 0.0 25 0.0 0.0 0.0 29.227204459115406 0.0 26 0.0 0.0 0.0 29.693034238488785 0.0 27 0.0 0.0 0.0 30.149226160357887 0.0 28 0.0 0.0 0.0 30.599795998682826 0.0 29 0.0 0.0 0.0 31.071649438996378 0.0 30 0.0 0.0 0.0 31.610967881839866 0.0 31 2.0078869800576666E-4 0.0 0.0 32.103301769350004 0.0 32 2.0078869800576666E-4 0.0 0.0 32.52636355604816 0.0 33 2.0078869800576666E-4 0.0 0.0 32.954244271498446 0.0 34 2.0078869800576666E-4 0.0 0.0 33.37770763559261 0.0 35 2.0078869800576666E-4 0.0 0.0 33.907589009629824 0.0 36 2.0078869800576666E-4 0.0 0.0 34.353540707900635 0.0 37 2.0078869800576666E-4 0.0 0.0 34.79206322434523 0.0 38 2.0078869800576666E-4 0.0 0.0 35.21813684151346 0.0 39 2.0078869800576666E-4 0.0 0.0 35.60646218345662 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAGAC 20 7.02943E-4 45.000004 21 GTCATCA 30 2.1630149E-6 45.000004 10 CGGGTGC 20 7.02943E-4 45.000004 6 CGGGTCG 20 7.02943E-4 45.000004 8 TGTCAAG 20 7.02943E-4 45.000004 1 CGTGGAA 20 7.02943E-4 45.000004 6 CCGGGAC 40 6.8012014E-9 45.000004 5 CTGTACG 20 7.02943E-4 45.000004 35 ATCTACC 20 7.02943E-4 45.000004 15 GTACACG 40 6.8012014E-9 45.000004 1 ACGCACG 20 7.02943E-4 45.000004 43 GACGTAG 30 2.1630149E-6 45.000004 1 ATCAGGC 20 7.02943E-4 45.000004 12 TAGAACG 60 0.0 45.000004 1 GACCGAG 20 7.02943E-4 45.000004 30 ACCGACG 20 7.02943E-4 45.000004 17 TAAGTTG 20 7.02943E-4 45.000004 11 AAGCGAT 20 7.02943E-4 45.000004 36 CGACACT 20 7.02943E-4 45.000004 12 CCTCGGT 20 7.02943E-4 45.000004 34 >>END_MODULE