##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934962.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 560571 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.53443363998495 34.0 31.0 34.0 31.0 34.0 2 32.69629716842291 34.0 31.0 34.0 31.0 34.0 3 32.76109538310045 34.0 31.0 34.0 31.0 34.0 4 36.16831231012664 37.0 37.0 37.0 35.0 37.0 5 36.0590201776403 37.0 35.0 37.0 35.0 37.0 6 36.04001455658605 37.0 35.0 37.0 35.0 37.0 7 36.20164617862858 37.0 37.0 37.0 35.0 37.0 8 36.20080239612823 37.0 37.0 37.0 35.0 37.0 9 38.018780850240205 39.0 39.0 39.0 35.0 39.0 10 37.51329804788332 39.0 37.0 39.0 34.0 39.0 11 37.43757347418971 39.0 37.0 39.0 35.0 39.0 12 37.31085981971954 39.0 37.0 39.0 35.0 39.0 13 37.196663758917246 39.0 37.0 39.0 34.0 39.0 14 38.451022261230065 40.0 38.0 41.0 34.0 41.0 15 38.52287043032908 40.0 38.0 41.0 34.0 41.0 16 38.632414092059705 40.0 38.0 41.0 35.0 41.0 17 38.678395778590044 40.0 38.0 41.0 35.0 41.0 18 38.204839351304294 39.0 38.0 40.0 35.0 41.0 19 37.701017355517855 38.0 37.0 40.0 35.0 41.0 20 37.11918383219967 38.0 35.0 40.0 34.0 41.0 21 37.053158297521634 38.0 35.0 40.0 34.0 41.0 22 36.88129603564936 37.0 35.0 40.0 34.0 41.0 23 36.778128015898076 37.0 35.0 40.0 33.0 41.0 24 36.56417295935751 37.0 35.0 40.0 33.0 41.0 25 36.38448831637741 36.0 35.0 40.0 33.0 41.0 26 36.52401033945745 37.0 35.0 40.0 33.0 41.0 27 36.56884498127802 37.0 35.0 40.0 33.0 41.0 28 36.51001211264942 37.0 35.0 40.0 33.0 41.0 29 36.37164426986055 37.0 35.0 40.0 33.0 41.0 30 36.049881281764485 37.0 35.0 40.0 32.0 41.0 31 35.45135763355579 37.0 35.0 40.0 30.0 41.0 32 34.63109400950103 37.0 35.0 40.0 21.0 41.0 33 33.704774239124035 37.0 34.0 40.0 15.0 41.0 34 32.93211743026307 37.0 33.0 40.0 10.0 41.0 35 32.444775059715894 37.0 32.0 40.0 8.0 41.0 36 32.243014711784944 37.0 31.0 40.0 8.0 41.0 37 32.05526151013877 37.0 31.0 40.0 8.0 41.0 38 31.931448469506986 37.0 30.0 40.0 8.0 41.0 39 31.880705566288658 37.0 30.0 40.0 7.0 41.0 40 31.685126415743948 36.0 30.0 40.0 7.0 41.0 41 31.542436194523084 36.0 29.0 40.0 7.0 41.0 42 31.4274088384879 36.0 29.0 40.0 7.0 41.0 43 31.333270896996098 36.0 28.0 40.0 7.0 41.0 44 31.20506233822299 36.0 27.0 40.0 7.0 41.0 45 31.118755697315773 36.0 26.0 40.0 7.0 41.0 46 30.983234951504805 35.0 26.0 40.0 7.0 41.0 47 30.906522099787537 35.0 25.0 40.0 7.0 41.0 48 30.858271298372554 35.0 25.0 40.0 7.0 41.0 49 30.751706741875694 35.0 25.0 40.0 7.0 41.0 50 30.65542634206907 35.0 24.0 40.0 7.0 41.0 51 29.979792033480148 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 1.0 9 8.0 10 4.0 11 6.0 12 6.0 13 9.0 14 11.0 15 18.0 16 52.0 17 102.0 18 196.0 19 370.0 20 692.0 21 1114.0 22 1900.0 23 3394.0 24 7169.0 25 14969.0 26 24992.0 27 29248.0 28 25204.0 29 18722.0 30 14632.0 31 13064.0 32 13610.0 33 17483.0 34 32497.0 35 47630.0 36 37961.0 37 50857.0 38 92977.0 39 111601.0 40 68.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.0343007397814 14.48094888961434 17.87088522238931 35.61386514821495 2 50.3691771425921 18.30990186791682 17.261149791908608 14.059771197582466 3 23.586307532854892 18.92338347863161 43.8852527155347 13.605056272978802 4 21.312911299371535 19.532762130042403 44.81305668684252 14.341269883743541 5 18.94853640306045 22.442117055645046 43.49511480258522 15.11423173870928 6 19.820147670857036 25.92909729543626 43.07322355241352 11.177531481293181 7 59.627772396360136 4.502016693692681 31.868755251341934 4.001455658605243 8 59.60493853588573 4.124722827260062 31.711237291975504 4.559101344878704 9 56.09565960422498 4.96565109504416 33.37793071707241 5.5607585836584486 10 30.47678171007776 17.94081392009219 39.51738495212917 12.06501941770088 11 24.414391754122136 18.764081623915615 42.401230174233056 14.420296447729191 12 21.62491459601014 17.516960385035972 45.72088103023525 15.137243988718646 13 16.995527774358646 22.53702028824181 47.022767856346476 13.444684081053069 14 14.59779403501073 24.192296783101515 45.85271089656796 15.35719828531979 15 12.49904115624961 19.968210984870783 52.87947467849746 14.653273180382145 16 14.424399407033187 19.13388312988007 49.89448259007334 16.54723487301341 17 15.455490919080722 18.23087530393117 45.48094710571899 20.832686671269116 18 16.81874374521693 18.869331449539846 47.930592199739195 16.38133260550403 19 17.029421786000345 20.57990870023601 45.67646203603112 16.714207477732526 20 18.60727722268901 19.841019246446926 46.497053896830195 15.05464963403387 21 16.151745274015244 21.20926697956191 47.1827832692023 15.456204477220547 22 15.046800494495791 20.02137106628777 45.19356156490436 19.738266874312085 23 14.718385360641204 20.85177435150944 45.40227732080325 19.0275629670461 24 16.085027587941582 19.065203158921882 47.618232124030676 17.23153712910586 25 13.76417973815984 21.81347233445897 46.20574378624652 18.216604141134667 26 13.98484759290081 22.650119253404117 45.657731134860704 17.707302018834365 27 15.655822366836672 21.902131933332264 46.348990582816455 16.093055117014615 28 12.95589675527275 22.014160561284832 48.734237054717426 16.295705628724996 29 13.979674296387076 20.87514338058872 47.492824280956384 17.65235804206782 30 16.051311965834834 22.094079072945263 44.587037146052865 17.267571815167035 31 17.51267903619702 24.69071714376948 41.102732749286 16.693871070747505 32 17.295935751225088 24.37728673085122 41.51320706922049 16.813570448703196 33 17.318948001234453 23.49532887002717 38.057444998046634 21.12827813069174 34 16.862984349886098 24.94902519038623 38.04138993990057 20.146600519827103 35 17.155543187214466 25.547700469699645 36.32456905548093 20.97218728760496 36 20.659648822361483 26.18651339437823 34.02316566500943 19.130672118250853 37 18.302944676053524 27.035469191235368 36.622836357927895 18.03874977478321 38 16.01277982628427 28.838452221038906 34.45326283378912 20.695505118887706 39 18.62315389130012 25.27387253354169 35.25405345620805 20.848920118950144 40 20.483399961824638 24.704453137961117 34.682314996673036 20.12983190354121 41 18.496497321481133 26.25394463859172 32.47028476321465 22.779273276712495 42 19.051288775195292 25.847216498891306 32.92678358316788 22.174711142745522 43 20.359062455960082 24.538015701846867 33.963226781264105 21.139695060928947 44 17.32715391984245 26.152976161806446 34.277370752322184 22.242499166028924 45 18.198586798104078 25.405167231269544 33.760933048623635 22.635312922002743 46 20.4921410490375 25.400172324290764 34.10201383946012 20.005672787211612 47 17.439717716399887 25.274229312611606 36.69026760214138 20.59578536884712 48 17.29201118145605 24.227617911022868 35.960297625100125 22.52007328242096 49 18.138647914358753 21.97027673568558 37.55206744551538 22.339007904440294 50 17.630237739733236 23.333707951356743 36.625333811417285 22.410720497492733 51 16.799477675441647 23.306057573438512 33.806243990502544 26.088220760617297 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 585.0 1 686.5 2 788.0 3 17085.5 4 33383.0 5 23368.0 6 13353.0 7 13403.0 8 13453.0 9 13898.0 10 14343.0 11 14350.5 12 14358.0 13 13615.0 14 12872.0 15 12091.0 16 11310.0 17 10319.0 18 9328.0 19 8415.0 20 7502.0 21 6926.5 22 6351.0 23 5692.0 24 5033.0 25 5080.0 26 4890.5 27 4654.0 28 4930.0 29 5206.0 30 5726.0 31 6246.0 32 7273.5 33 8301.0 34 8493.0 35 8685.0 36 9991.5 37 11298.0 38 12217.0 39 13136.0 40 15964.0 41 18792.0 42 23417.0 43 28042.0 44 31440.5 45 34839.0 46 40954.5 47 47070.0 48 50132.5 49 53195.0 50 51520.0 51 49845.0 52 41577.0 53 33309.0 54 28331.0 55 23353.0 56 20766.5 57 18180.0 58 15986.5 59 13793.0 60 12126.5 61 10460.0 62 9302.0 63 8144.0 64 7048.0 65 5952.0 66 4934.0 67 3916.0 68 3128.5 69 2341.0 70 1987.0 71 1633.0 72 1344.0 73 1055.0 74 873.0 75 503.5 76 316.0 77 262.5 78 209.0 79 135.5 80 62.0 81 41.0 82 20.0 83 18.0 84 16.0 85 11.5 86 7.0 87 11.0 88 15.0 89 8.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 560571.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.93383610792814 #Duplication Level Percentage of deduplicated Percentage of total 1 76.98043817451608 27.662024488795556 2 10.251048603560871 7.36719000909524 3 3.9855680807926968 4.296502506365833 4 2.070318928383763 2.975780042547342 5 1.1861335055394524 2.1311163495088477 6 0.7395798088464552 1.5945563783892804 7 0.4653765235634507 1.170593460834448 8 0.3460811943561863 0.9948819934424977 9 0.2763539061964213 0.8937410375743153 >10 2.981105927011934 27.08712980877962 >50 0.6653727143135907 15.175283323193456 >100 0.0465507906591955 3.249677567729491 >500 0.004047894839930044 1.0820137193284955 >1k 0.0015179605649737662 1.1156505094605358 >5k 0.0 0.0 >10k+ 5.059868549912555E-4 3.2038588049550363 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17621 3.1434019954653376 No Hit GCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 2444 0.43598402343324927 TruSeq Adapter, Index 21 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 2311 0.4122582152840586 TruSeq Adapter, Index 21 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGCT 1381 0.24635594777467976 TruSeq Adapter, Index 14 (95% over 23bp) GCCGAAGGGATCAATATTTTCACAACCTCAATCTTATTAATCTTCATTCTT 980 0.1748217442571949 No Hit TCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 931 0.16608065704433517 TruSeq Adapter, Index 21 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTG 887 0.158231517506257 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCC 797 0.1421764593601881 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCG 654 0.11666675586143416 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGC 624 0.1113150698127445 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.26722752336456934 0.0 2 0.0 0.0 0.0 1.476173401763559 0.0 3 0.0 0.0 0.0 2.111775314812932 0.0 4 0.0 0.0 0.0 2.7584373790295964 0.0 5 0.0 0.0 0.0 4.3939126355091505 0.0 6 0.0 0.0 0.0 5.155100781167773 0.0 7 0.0 0.0 0.0 5.957318519866351 0.0 8 0.0 0.0 0.0 7.126661921505037 0.0 9 0.0 0.0 0.0 7.530714218181105 0.0 10 0.0 0.0 0.0 8.621031055834141 0.0 11 0.0 0.0 0.0 10.171949672744399 0.0 12 0.0 0.0 0.0 11.449753911636527 0.0 13 0.0 0.0 0.0 11.895906138562287 0.0 14 0.0 0.0 0.0 12.062521964211491 0.0 15 0.0 0.0 0.0 12.433393807385684 0.0 16 0.0 0.0 0.0 13.19440356350935 0.0 17 0.0 0.0 0.0 14.180362523212938 0.0 18 0.0 0.0 0.0 15.39305458184601 0.0 19 0.0 0.0 0.0 15.987270122785517 0.0 20 1.7838953495632134E-4 0.0 0.0 16.542418355569588 0.0 21 1.7838953495632134E-4 0.0 0.0 17.278275187264413 0.0 22 1.7838953495632134E-4 0.0 0.0 17.97774055382815 0.0 23 1.7838953495632134E-4 0.0 0.0 18.724300757620355 0.0 24 1.7838953495632134E-4 0.0 0.0 19.302282850878836 0.0 25 1.7838953495632134E-4 0.0 0.0 19.791783734798983 0.0 26 1.7838953495632134E-4 0.0 0.0 20.271651583831485 0.0 27 1.7838953495632134E-4 0.0 0.0 20.741172839836523 0.0 28 1.7838953495632134E-4 0.0 0.0 21.217651287704857 0.0 29 1.7838953495632134E-4 0.0 0.0 21.716428427442732 0.0 30 1.7838953495632134E-4 0.0 0.0 22.28584782302331 0.0 31 3.5677906991264267E-4 0.0 0.0 22.79996646276743 0.0 32 3.5677906991264267E-4 0.0 0.0 23.271806782726898 0.0 33 3.5677906991264267E-4 0.0 0.0 23.763805120136432 0.0 34 3.5677906991264267E-4 0.0 0.0 24.217449707530356 0.0 35 3.5677906991264267E-4 0.0 0.0 24.77348988798921 0.0 36 3.5677906991264267E-4 0.0 0.0 25.227312864918094 0.0 37 3.5677906991264267E-4 0.0 0.0 25.629759655779555 0.0 38 3.5677906991264267E-4 0.0 0.0 26.076447051310183 0.0 39 3.5677906991264267E-4 0.0 0.0 26.495662458457538 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCG 30 2.1635042E-6 45.000004 1 CGAACTA 30 2.1635042E-6 45.000004 29 CACGACC 35 1.2104465E-7 45.000004 27 TACGCCG 30 2.1635042E-6 45.000004 3 CCGAGGT 35 1.2104465E-7 45.000004 7 TTACGAG 30 2.1635042E-6 45.000004 1 CGAGACC 30 2.1635042E-6 45.000004 36 AGTAGCG 30 2.1635042E-6 45.000004 1 CCTATCC 30 2.1635042E-6 45.000004 22 TACAGCG 30 2.1635042E-6 45.000004 1 ACGAGAC 35 1.2104465E-7 45.000004 35 TACACGC 65 0.0 45.000004 35 TCGCCAA 20 7.030192E-4 45.0 19 CTTAACG 25 3.8882397E-5 45.0 1 TAATACG 50 2.1827873E-11 45.0 1 GTCGCGC 20 7.030192E-4 45.0 21 CTCACGA 20 7.030192E-4 45.0 24 ACCGGTA 20 7.030192E-4 45.0 41 GTCGCAC 25 3.8882397E-5 45.0 12 TCCGCTA 25 3.8882397E-5 45.0 31 >>END_MODULE