##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934960.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 979761 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.438768230211245 34.0 31.0 34.0 30.0 34.0 2 32.62344796332983 34.0 31.0 34.0 31.0 34.0 3 32.688835338414165 34.0 31.0 34.0 31.0 34.0 4 36.114817797401614 37.0 37.0 37.0 35.0 37.0 5 35.987129514238674 37.0 35.0 37.0 35.0 37.0 6 35.97287501747875 37.0 35.0 37.0 35.0 37.0 7 36.17371379346596 37.0 36.0 37.0 35.0 37.0 8 36.19923634437378 37.0 37.0 37.0 35.0 37.0 9 37.9969982475318 39.0 39.0 39.0 35.0 39.0 10 37.46913584027125 39.0 37.0 39.0 34.0 39.0 11 37.33470101381867 39.0 37.0 39.0 34.0 39.0 12 37.35281257367868 39.0 37.0 39.0 34.0 39.0 13 37.34848498766536 39.0 37.0 39.0 34.0 39.0 14 38.58673492821208 40.0 38.0 41.0 34.0 41.0 15 38.63654809693384 40.0 38.0 41.0 34.0 41.0 16 38.736599027722065 40.0 38.0 41.0 35.0 41.0 17 38.76639915244636 40.0 38.0 41.0 35.0 41.0 18 38.30458550605709 39.0 38.0 40.0 35.0 41.0 19 37.82351614322268 38.0 37.0 40.0 34.0 41.0 20 37.26816029623551 38.0 35.0 40.0 34.0 41.0 21 37.22889357710707 38.0 35.0 40.0 34.0 41.0 22 37.069352627834746 38.0 35.0 40.0 34.0 41.0 23 36.93110360587939 38.0 35.0 40.0 33.0 41.0 24 36.69748744846957 38.0 35.0 40.0 33.0 41.0 25 36.57060140177043 37.0 35.0 40.0 33.0 41.0 26 36.75920658201337 38.0 35.0 40.0 33.0 41.0 27 36.830061617067834 38.0 35.0 40.0 33.0 41.0 28 36.75088720616559 38.0 35.0 40.0 33.0 41.0 29 36.616421760000655 38.0 35.0 40.0 33.0 41.0 30 36.28186567948714 38.0 35.0 40.0 32.0 41.0 31 35.708836134526685 38.0 35.0 40.0 30.0 41.0 32 34.95255985898602 38.0 35.0 40.0 23.0 41.0 33 33.9503940246652 38.0 34.0 40.0 16.0 41.0 34 33.162873394634 38.0 33.0 40.0 10.0 41.0 35 32.724000036743654 38.0 33.0 40.0 8.0 41.0 36 32.51695974834679 38.0 32.0 40.0 8.0 41.0 37 32.32815145734521 38.0 31.0 40.0 8.0 41.0 38 32.20069996662451 38.0 31.0 40.0 8.0 41.0 39 32.16922902626253 38.0 31.0 40.0 8.0 41.0 40 32.098641403362656 38.0 30.0 40.0 8.0 41.0 41 32.012052939441354 38.0 30.0 40.0 7.0 41.0 42 31.901409629491273 38.0 30.0 40.0 7.0 41.0 43 31.782325485501055 38.0 29.0 40.0 7.0 41.0 44 31.657638954806327 37.0 29.0 40.0 7.0 41.0 45 31.592468979679737 37.0 28.0 40.0 7.0 41.0 46 31.478218667613838 37.0 27.0 40.0 7.0 41.0 47 31.39909222759428 37.0 27.0 40.0 7.0 41.0 48 31.333896736040728 37.0 27.0 40.0 7.0 41.0 49 31.21685390620774 37.0 27.0 40.0 7.0 41.0 50 31.102439268352178 36.0 26.0 40.0 7.0 41.0 51 30.49329275200789 35.0 24.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 5.0 10 3.0 11 2.0 12 10.0 13 10.0 14 13.0 15 32.0 16 51.0 17 150.0 18 311.0 19 657.0 20 1099.0 21 1865.0 22 3073.0 23 5789.0 24 12604.0 25 26570.0 26 44694.0 27 48847.0 28 40180.0 29 30139.0 30 23652.0 31 21620.0 32 23000.0 33 29015.0 34 47900.0 35 64616.0 36 68829.0 37 99702.0 38 183657.0 39 201550.0 40 113.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.391329109854343 16.302343122455373 18.086247564457047 34.22008020323324 2 50.341869088481786 18.054709260727872 17.79209419440047 13.811327456389874 3 23.524818807852117 17.84414770540979 45.02169406620594 13.609339420532148 4 21.773269195242513 20.290560657139853 44.36000208214044 13.576168065477193 5 19.25010283120067 22.31135960708785 43.95949624449228 14.479041317219199 6 20.545316663961927 24.764917158368213 43.04325238502043 11.646513792649433 7 59.962582711498015 4.238992978899956 31.51952363892827 4.2789006706737664 8 59.842349307637264 3.402258305852141 31.295081147341037 5.4603112391695525 9 55.262865127311656 5.563907932648881 33.31343052030036 5.8597964197391 10 27.377697213912374 22.92855094252578 39.08626695694154 10.607484886620307 11 19.834224877291504 18.908693038404266 46.062764286392294 15.19431779791194 12 18.459195660982626 17.520497345781266 49.37377584941633 14.646531143819768 13 17.009046083687757 19.87964411728983 49.62444922792395 13.486860571098461 14 14.388304902930408 22.541007449776014 46.98492795692011 16.085759690373468 15 13.342641725890294 21.00410202079895 50.90761930715756 14.745636946153196 16 15.732510275465138 20.556237694703096 47.85309886798924 15.85815316184253 17 16.074124199677268 19.47924034534953 45.642763898542604 18.8038715564306 18 15.976957645793208 19.91026382964825 48.394659513901864 15.71811901065668 19 15.088271527443938 21.14709607751278 46.53849255073431 17.226139844308967 20 16.67406643048662 21.655893631201895 47.093219672961055 14.576820265350426 21 15.668310945220314 21.46829686015263 48.021915548792 14.841476645835055 22 14.804835056712811 20.41365190082071 45.48160214582944 19.299910896637037 23 13.314471590520546 21.75336638220954 45.95947379003655 18.972688237233363 24 15.468160092104094 19.937005045107938 46.77957175270295 17.815263110085013 25 13.416231101258369 21.719684698615275 45.79229016055957 19.071794039566793 26 12.875691112424356 21.343266368022405 47.835645631944935 17.945396887608304 27 14.352173642347472 21.74469079704132 46.3195616073716 17.58357395323962 28 12.093153330250948 21.777147692141245 47.54087986764119 18.588819109966614 29 13.07257586288901 20.70219165694491 47.47331236903694 18.75192011112914 30 13.85521571077028 21.536068490172603 44.63619188761341 19.97252391144371 31 14.245617043340161 24.148236151469593 41.294866809354524 20.31127999583572 32 15.568898945763305 24.70867895333658 40.34208342646829 19.380338674431826 33 15.511027689405884 24.488931484310967 37.828817436089004 22.17122339019414 34 14.83096387792533 24.60130582866638 38.61533578086901 21.952394512539282 35 16.450848727393723 24.989053452831865 35.77545952533322 22.784638294441194 36 17.265639273251335 26.24558438231365 34.936989735251764 21.55178660918326 37 16.467587503482992 27.712166538574202 35.432110484087445 20.38813547385536 38 16.831962080548216 29.58415368646027 32.65551496742573 20.928369265565784 39 17.264924813296304 26.7891863423835 34.53566737194071 21.41022147237949 40 18.886340648382614 23.37906897702603 35.476304935591436 22.25828543899992 41 18.16636914512825 25.23697105722722 32.51619527619491 24.080464521449617 42 18.607701265920976 25.18328449489212 34.62630172052164 21.582712518665268 43 18.583001364618514 25.88263872515848 33.91347481681757 21.62088509340543 44 16.735305855203464 25.561437942518634 34.036872257622015 23.66638394465589 45 17.637464646990438 24.120066016099845 33.367423279759045 24.875046057150673 46 19.018924002894583 24.093426866348018 34.24733174723224 22.640317383525165 47 15.833249129124347 24.911993843396502 36.92706690713348 22.327690120345675 48 16.64885620064485 23.539005941244852 35.75994553773828 24.052192320372008 49 17.837819631522382 22.53059674757415 37.4162678449132 22.215315775990266 50 17.23348857527499 22.170304798823388 36.3166119084144 24.279594717487225 51 16.739796746349363 21.58608068702469 33.361095205871635 28.313027360754305 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 528.0 1 704.0 2 880.0 3 26396.0 4 51912.0 5 36821.0 6 21730.0 7 21962.0 8 22194.0 9 22917.0 10 23640.0 11 23826.0 12 24012.0 13 23120.0 14 22228.0 15 20925.0 16 19622.0 17 18027.5 18 16433.0 19 15172.5 20 13912.0 21 12899.5 22 11887.0 23 10963.0 24 10039.0 25 9884.0 26 9184.0 27 8639.0 28 9551.0 29 10463.0 30 10232.0 31 10001.0 32 11790.5 33 13580.0 34 16538.0 35 19496.0 36 20473.0 37 21450.0 38 25522.0 39 29594.0 40 33296.0 41 36998.0 42 41604.0 43 46210.0 44 53818.5 45 61427.0 46 73536.5 47 85646.0 48 95482.0 49 105318.0 50 102482.5 51 99647.0 52 81663.5 53 63680.0 54 52133.0 55 40586.0 56 33019.5 57 25453.0 58 21598.0 59 17743.0 60 15186.5 61 12630.0 62 10923.5 63 9217.0 64 7715.5 65 6214.0 66 4631.0 67 3048.0 68 2410.5 69 1773.0 70 1358.0 71 943.0 72 722.0 73 501.0 74 429.0 75 270.0 76 183.0 77 152.5 78 122.0 79 71.5 80 21.0 81 20.5 82 20.0 83 33.5 84 47.0 85 26.5 86 6.0 87 3.5 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 979761.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.51766262298085 #Duplication Level Percentage of deduplicated Percentage of total 1 74.95602584500267 26.62262837522238 2 10.530412430291584 7.480312719598807 3 4.481859364068555 4.775555064499033 4 2.389692116914172 3.395051135254178 5 1.4640233850835076 2.5999344331775203 6 0.965074345884852 2.056631101393926 7 0.6511380255989503 1.6188830499952167 8 0.4741869156578168 1.347360871245297 9 0.3442490056190375 1.100422803588625 >10 3.1393781640529093 26.110113726608326 >50 0.5266045944731597 11.960451419358384 >100 0.06976618097106173 4.416835457050896 >500 0.004670539311816609 1.1172465173320152 >1k 0.0020433609489197663 1.3285446244517858 >5k 5.838174139770761E-4 1.1377749889756437 >10k+ 2.9190870698853804E-4 2.9322537122479635 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28282 2.8866223497363133 No Hit CCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGC 5505 0.5618717217770457 No Hit GCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGC 5469 0.5581973562940349 No Hit CTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGCT 3535 0.3608022772900738 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGC 2278 0.23250568250828518 No Hit CGCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTG 1967 0.2007632473633876 No Hit ACTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGC 1587 0.16197827837605294 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCC 1385 0.14136100538804872 No Hit GCCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTG 1059 0.10808758462523002 No Hit AGCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTG 1003 0.10237190498499124 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0413141572281403E-4 0.0 0.0 0.38519598146895007 0.0 2 2.0413141572281403E-4 0.0 0.0 2.0125316276112235 0.0 3 2.0413141572281403E-4 0.0 0.0 2.8994826289268505 0.0 4 2.0413141572281403E-4 0.0 0.0 3.7771456508270895 0.0 5 2.0413141572281403E-4 0.0 0.0 5.870819516188131 0.0 6 2.0413141572281403E-4 0.0 0.0 6.78471586437917 0.0 7 2.0413141572281403E-4 0.0 0.0 7.835788523935939 0.0 8 2.0413141572281403E-4 0.0 0.0 9.480883603246097 0.0 9 2.0413141572281403E-4 0.0 0.0 10.069088277651387 0.0 10 2.0413141572281403E-4 0.0 0.0 11.466980212521216 0.0 11 2.0413141572281403E-4 0.0 0.0 13.61587162583528 0.0 12 2.0413141572281403E-4 0.0 0.0 15.29372979736895 0.0 13 2.0413141572281403E-4 0.0 0.0 15.896325736582698 0.0 14 2.0413141572281403E-4 0.0 0.0 16.125361185023696 0.0 15 2.0413141572281403E-4 0.0 0.0 16.581594899164184 0.0 16 2.0413141572281403E-4 0.0 0.0 17.53815471324129 0.0 17 2.0413141572281403E-4 0.0 0.0 18.765698981690434 0.0 18 2.0413141572281403E-4 0.0 0.0 20.189311474941338 0.0 19 2.0413141572281403E-4 0.0 0.0 21.011450751764972 0.0 20 2.0413141572281403E-4 0.0 0.0 21.778372480635582 0.0 21 2.0413141572281403E-4 0.0 0.0 22.66583381049052 0.0 22 2.0413141572281403E-4 0.0 0.0 23.621168836073288 0.0 23 2.0413141572281403E-4 0.0 0.0 24.50863016592822 0.0 24 2.0413141572281403E-4 0.0 0.0 25.198798482487057 0.0 25 2.0413141572281403E-4 0.0 0.0 25.793433296487613 0.0 26 2.0413141572281403E-4 0.0 0.0 26.398682944105758 0.0 27 2.0413141572281403E-4 0.0 0.0 26.966372411230903 0.0 28 2.0413141572281403E-4 0.0 0.0 27.533653615524603 0.0 29 2.0413141572281403E-4 0.0 0.0 28.12267481559278 0.0 30 2.0413141572281403E-4 0.0 0.0 28.784264733950423 0.0 31 3.0619712358422106E-4 0.0 0.0 29.393801141298745 0.0 32 4.0826283144562806E-4 0.0 0.0 29.987211166804965 0.0 33 4.0826283144562806E-4 0.0 0.0 30.525199512942443 0.0 34 4.0826283144562806E-4 0.0 0.0 31.06410645045067 0.0 35 4.0826283144562806E-4 0.0 0.0 31.62414098948621 0.0 36 4.0826283144562806E-4 0.0 0.0 32.15131037059038 0.0 37 4.0826283144562806E-4 0.0 0.0 32.66163890989741 0.0 38 4.0826283144562806E-4 0.0 0.0 33.170844726417975 0.0 39 4.0826283144562806E-4 0.0 0.0 33.67178322060176 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGATCG 20 7.0327753E-4 45.000004 1 AGCCGAC 20 7.0327753E-4 45.000004 19 TCGTTCC 20 7.0327753E-4 45.000004 16 AAATCGA 35 1.2116834E-7 45.000004 28 TTCAGCG 45 3.8380676E-10 45.000004 1 CTCCGCG 20 7.0327753E-4 45.000004 1 GCGCGAT 20 7.0327753E-4 45.000004 1 CGGCCAA 20 7.0327753E-4 45.000004 30 ATTACGA 20 7.0327753E-4 45.000004 18 GCTATCG 40 6.8139343E-9 45.000004 2 GGTCCGT 20 7.0327753E-4 45.000004 8 CGACCCG 20 7.0327753E-4 45.000004 32 CATTCGG 20 7.0327753E-4 45.000004 21 ATCACGC 20 7.0327753E-4 45.000004 13 ACCCTCG 20 7.0327753E-4 45.000004 15 CATTACG 20 7.0327753E-4 45.000004 17 ATCCGCC 20 7.0327753E-4 45.000004 13 CTAACGG 40 6.8139343E-9 45.000004 2 GCCGAGT 20 7.0327753E-4 45.000004 13 CCGTAAC 20 7.0327753E-4 45.000004 11 >>END_MODULE