##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934958.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1554523 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5875461475964 34.0 31.0 34.0 31.0 34.0 2 32.74876923660827 34.0 31.0 34.0 31.0 34.0 3 32.80618041675807 34.0 31.0 34.0 31.0 34.0 4 36.200951674565125 37.0 37.0 37.0 35.0 37.0 5 36.09624238431982 37.0 35.0 37.0 35.0 37.0 6 36.08731360037773 37.0 36.0 37.0 35.0 37.0 7 36.26207396095137 37.0 37.0 37.0 35.0 37.0 8 36.27287470175739 37.0 37.0 37.0 35.0 37.0 9 38.08429016489303 39.0 39.0 39.0 37.0 39.0 10 37.601743428691634 39.0 38.0 39.0 35.0 39.0 11 37.44615808193253 39.0 37.0 39.0 34.0 39.0 12 37.42288341825756 39.0 37.0 39.0 35.0 39.0 13 37.42146690656877 39.0 37.0 39.0 35.0 39.0 14 38.71870342220733 40.0 38.0 41.0 35.0 41.0 15 38.7644943175495 40.0 38.0 41.0 35.0 41.0 16 38.85969007856429 40.0 38.0 41.0 35.0 41.0 17 38.86958700514563 40.0 38.0 41.0 35.0 41.0 18 38.37235859488731 39.0 38.0 41.0 35.0 41.0 19 37.9022709860195 38.0 37.0 41.0 35.0 41.0 20 37.357850607549715 38.0 35.0 41.0 34.0 41.0 21 37.3159400021743 38.0 35.0 41.0 34.0 41.0 22 37.137407423370384 38.0 35.0 41.0 34.0 41.0 23 37.025358904306984 38.0 35.0 40.0 34.0 41.0 24 36.819698389795455 38.0 35.0 40.0 33.0 41.0 25 36.68289436695372 38.0 35.0 40.0 33.0 41.0 26 36.82806815981494 38.0 35.0 40.0 33.0 41.0 27 36.87583522405265 38.0 35.0 40.0 33.0 41.0 28 36.83341835405459 38.0 35.0 40.0 33.0 41.0 29 36.69820259976855 38.0 35.0 40.0 33.0 41.0 30 36.397064565786415 38.0 35.0 40.0 33.0 41.0 31 35.86823996814457 38.0 35.0 40.0 31.0 41.0 32 35.160085762642304 38.0 35.0 41.0 23.0 41.0 33 34.27191620838032 38.0 35.0 41.0 17.0 41.0 34 33.50888343240981 38.0 34.0 41.0 12.0 41.0 35 33.049404222388475 38.0 33.0 41.0 10.0 41.0 36 32.85160914312622 38.0 33.0 41.0 9.0 41.0 37 32.65318750510607 38.0 33.0 41.0 8.0 41.0 38 32.52568279787433 38.0 32.0 41.0 8.0 41.0 39 32.4401575274216 38.0 32.0 41.0 8.0 41.0 40 32.298365479314235 38.0 31.0 40.0 8.0 41.0 41 32.17823023525545 38.0 31.0 40.0 8.0 41.0 42 32.07167471951203 38.0 31.0 40.0 7.0 41.0 43 31.987787250494204 37.0 30.0 40.0 7.0 41.0 44 31.88585244476923 37.0 30.0 40.0 7.0 41.0 45 31.82701896337333 37.0 30.0 40.0 7.0 41.0 46 31.766570838771766 37.0 29.0 40.0 7.0 41.0 47 31.73814861536304 37.0 29.0 40.0 7.0 41.0 48 31.715398228266807 37.0 29.0 40.0 7.0 41.0 49 31.628300128077875 36.0 29.0 40.0 7.0 41.0 50 31.549622617355936 36.0 29.0 40.0 7.0 41.0 51 30.99475594764439 35.0 27.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 8.0 10 12.0 11 12.0 12 28.0 13 21.0 14 34.0 15 63.0 16 115.0 17 266.0 18 458.0 19 905.0 20 1601.0 21 2510.0 22 4273.0 23 7805.0 24 16262.0 25 35078.0 26 61264.0 27 74823.0 28 68130.0 29 53038.0 30 41191.0 31 36401.0 32 36321.0 33 44215.0 34 78631.0 35 99463.0 36 108943.0 37 138457.0 38 271016.0 39 372933.0 40 245.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.55625423361378 15.679214781640413 18.331218000634276 35.433312984111524 2 50.112735546531 17.63035992391235 18.502202926556894 13.754701602999763 3 23.519883591300996 18.017938621686525 44.966848351552215 13.495329435460265 4 20.90403294129453 19.425508660856096 45.533324370240905 14.13713402760847 5 19.9007669876869 21.480672849485018 44.020448716422976 14.598111446405104 6 20.478243165266775 24.89252330135997 42.8862744391688 11.74295909420446 7 61.21717079773023 3.613198389473813 31.504069093863517 3.6655617189324317 8 62.15205564665174 3.3372938193902564 30.693852712375435 3.816797821582569 9 58.289520322311084 4.621417631003208 32.22750644409893 4.861555602586774 10 31.117841292795283 20.3798850193918 37.70294810691125 10.799325580901666 11 21.782180128566768 19.294343023551274 43.836726764415836 15.08675008346612 12 19.98188511845756 17.0885860164179 47.27430858211812 15.655220283006427 13 18.045728496780043 18.146595450823177 48.59561421735156 15.21206183504522 14 15.307267888606344 20.43018983958423 47.4971422101828 16.76540006162662 15 14.385634693085917 19.79848480852326 50.244480139566924 15.571400358823897 16 16.853079690683252 19.88680772172557 46.93201708820005 16.328095499391132 17 16.75472154480828 19.690670385706742 45.68919211873996 17.86541595074502 18 16.68736969475524 19.259026723953266 48.01028997319435 16.043313608097147 19 16.647679062966585 20.515553645716402 45.95235966273899 16.88440762857803 20 17.891790600718032 20.771645064112914 46.28718906056713 15.04937527460192 21 17.673652946916835 20.164963786319017 46.75974559398606 15.401637672778081 22 17.249921680155264 18.62230407655596 46.3467571724574 17.781017070831375 23 16.293744126011646 19.257933140905603 46.865115537048986 17.58320719603377 24 17.03770224049435 18.556560436867127 46.91702856760563 17.488708755032896 25 15.485714910618883 20.626198518773926 45.41785486609076 18.470231704516436 26 15.28166517960815 20.63906420168759 46.41912663884677 17.660143979857487 27 15.362268683062263 20.325849151154404 46.299668772993385 18.012213392789942 28 13.594266537066355 19.682757990714837 47.447416345721486 19.275559126497324 29 14.883600950259341 18.912746868331958 47.68626774901368 18.51738443239502 30 16.5966666302139 19.699161736429758 45.6570279114558 18.047143721900543 31 16.298375771860567 21.32332554745089 43.325187211768494 19.053111468920047 32 17.084211684227252 21.38167141946436 43.1082717978441 18.42584509846429 33 17.98230068001567 21.8556431780038 40.23916017968212 19.922895962298405 34 16.678749687203084 23.394507511307328 39.756246771517695 20.170496029971897 35 16.820079214009702 23.94972605744656 37.69362048679884 21.536574241744898 36 18.14839664643109 25.13465545379515 36.85419900509674 19.862748894677015 37 17.61234796783322 25.552725820074713 36.750565929227164 20.084360282864903 38 17.550271047774785 25.845548763189736 35.46933689626979 21.13484329276569 39 18.98846141227888 24.95498619190581 36.330244068437715 19.726308327377595 40 19.235739837879528 24.952477383737648 35.639678538046724 20.172104240336104 41 16.95156649338736 25.706663716136717 34.76654896711081 22.575220823365107 42 17.22772837712919 24.533635076483268 35.689983358239154 22.54865318814839 43 18.167180543485042 24.16985789209938 35.867980081349714 21.794981483065868 44 17.99394412305254 24.22048435436465 35.33315364262864 22.452417879954172 45 18.415938522620763 24.16895729429542 35.02264038550732 22.392463797576493 46 19.2772316652761 23.941427691967245 35.695901572379434 21.085439070377216 47 16.230637951320116 24.21508076754091 38.187855695927304 21.366425585211672 48 17.04657956170478 22.25782442588498 38.360899131116106 22.334696881294132 49 17.673202648014858 21.46150298194366 39.6749999839179 21.19029438612359 50 17.385590306479866 21.717787385583872 38.37749586207473 22.519126445861527 51 16.543788673438733 22.13296297320786 36.59321862719304 24.73002972616037 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 434.0 1 765.5 2 1097.0 3 59041.5 4 116986.0 5 79652.5 6 42319.0 7 40803.5 8 39288.0 9 38585.0 10 37882.0 11 36406.0 12 34930.0 13 32827.5 14 30725.0 15 28169.0 16 25613.0 17 23627.0 18 21641.0 19 19397.0 20 17153.0 21 15624.0 22 14095.0 23 13408.5 24 12722.0 25 12551.0 26 13410.5 27 14441.0 28 15203.0 29 15965.0 30 17344.0 31 18723.0 32 20593.0 33 22463.0 34 26053.5 35 29644.0 36 32916.5 37 36189.0 38 39032.0 39 41875.0 40 46241.0 41 50607.0 42 58641.0 43 66675.0 44 74087.0 45 81499.0 46 95282.5 47 109066.0 48 117920.0 49 126774.0 50 125136.0 51 123498.0 52 109953.0 53 96408.0 54 84199.0 55 71990.0 56 64355.0 57 56720.0 58 52229.0 59 47738.0 60 43915.5 61 40093.0 62 36627.0 63 33161.0 64 28325.0 65 23489.0 66 19555.5 67 15622.0 68 12562.5 69 9503.0 70 8002.5 71 6502.0 72 5366.0 73 4230.0 74 3168.0 75 1508.0 76 910.0 77 835.5 78 761.0 79 553.0 80 345.0 81 244.0 82 143.0 83 105.0 84 67.0 85 41.5 86 16.0 87 15.0 88 14.0 89 13.0 90 12.0 91 8.5 92 5.0 93 3.5 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1554523.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.53901823216474 #Duplication Level Percentage of deduplicated Percentage of total 1 76.54870975925985 24.908198625052435 2 10.138476832076535 6.597921649706365 3 3.949829508963496 3.855707232183166 4 1.9996277010787962 2.6026368889177847 5 1.152690120117552 1.8753702417270597 6 0.7196831213089452 1.40506693233918 7 0.5313185317253291 1.210200837362824 8 0.37608601331639996 0.9789975715331594 9 0.31635546113862006 0.9264506506050998 >10 3.33650337366252 27.21003555658476 >50 0.8445733270088254 17.653901658298025 >100 0.07969032608540434 4.450452697097648 >500 0.003429709761959265 0.7488318966701081 >1k 0.0028244668627899834 1.6708397855744361 >5k 0.0 0.0 >10k+ 2.0174763305642738E-4 3.9053877763479794 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 59491 3.8269617110843646 No Hit GCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 4571 0.29404518299182447 No Hit CCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 3953 0.2542902227885982 No Hit CTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGCT 2003 0.12884981438035975 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCG 1736 0.11167412769061634 No Hit TCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 1716 0.1103875593992498 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGC 1694 0.10897233427874661 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1366978809576957 0.0 2 0.0 0.0 0.0 0.9162939371112554 0.0 3 0.0 0.0 0.0 1.3157733915805685 0.0 4 0.0 0.0 0.0 1.78414857805256 0.0 5 0.0 0.0 0.0 2.9787272365864 0.0 6 0.0 0.0 0.0 3.530472048338944 0.0 7 0.0 0.0 0.0 4.149890352217368 0.0 8 0.0 0.0 0.0 5.030867989730612 0.0 9 0.0 0.0 0.0 5.341059604779087 0.0 10 0.0 0.0 0.0 6.174562872340904 0.0 11 0.0 0.0 0.0 7.3684339183144925 0.0 12 0.0 0.0 0.0 8.399811389088486 0.0 13 0.0 0.0 0.0 8.759407226525436 0.0 14 0.0 0.0 0.0 8.896941376872519 0.0 15 0.0 0.0 0.0 9.187126854990245 0.0 16 0.0 0.0 0.0 9.799469033266153 0.0 17 0.0 0.0 0.0 10.550245959693102 0.0 18 0.0 0.0 0.0 11.350555765337663 0.0 19 0.0 0.0 0.0 11.886733100764673 0.0 20 0.0 0.0 0.0 12.382383535013634 0.0 21 0.0 0.0 0.0 13.010100204371373 0.0 22 0.0 0.0 0.0 13.677185863444928 0.0 23 0.0 0.0 0.0 14.35366347104546 0.0 24 0.0 0.0 0.0 14.878519005508442 0.0 25 0.0 0.0 0.0 15.362333011476833 0.0 26 0.0 0.0 0.0 15.79082458091646 0.0 27 0.0 0.0 0.0 16.24002989984709 0.0 28 0.0 0.0 0.0 16.67347475720848 0.0 29 0.0 0.0 0.0 17.15046995123263 0.0 30 0.0 0.0 0.0 17.666062193997774 0.0 31 0.0 0.0 0.0 18.133987081567785 0.0 32 0.0 0.0 0.0 18.57380045197144 0.0 33 0.0 0.0 0.0 19.000426497388588 0.0 34 6.432841456832739E-5 0.0 0.0 19.450532414123174 0.0 35 1.2865682913665478E-4 0.0 0.0 19.92579074095398 0.0 36 1.2865682913665478E-4 0.0 0.0 20.384580993655288 0.0 37 1.2865682913665478E-4 0.0 0.0 20.820213017112003 0.0 38 1.2865682913665478E-4 0.0 0.0 21.255394741666738 0.0 39 1.2865682913665478E-4 0.0 0.0 21.716114846805098 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACCG 20 7.0340553E-4 45.0 1 TCCGCGC 20 7.0340553E-4 45.0 29 ATCGTAC 20 7.0340553E-4 45.0 39 GCTCGAT 20 7.0340553E-4 45.0 40 GTACGTC 20 7.0340553E-4 45.0 9 CGTTTTT 40585 0.0 44.595295 1 CGGTCTA 55 6.184564E-11 40.909092 31 TAACGGA 50 1.0822987E-9 40.5 20 TTAACGG 95 0.0 40.263157 2 GTTTTTT 45850 0.0 39.597057 2 CTACGTC 40 3.459263E-7 39.375 30 ACTCTCG 35 6.2497093E-6 38.57143 11 CGAATAT 105 0.0 38.57143 14 TATAGCG 70 0.0 38.57143 1 ATCTCGT 30 1.1401072E-4 37.499996 41 TAACGCG 60 1.5643309E-10 37.499996 1 ATCGACG 30 1.1401072E-4 37.499996 1 ACGGGAG 510 0.0 36.61765 5 CGGTTAG 25 0.0021073367 36.0 1 CGTTGCG 25 0.0021073367 36.0 2 >>END_MODULE