SRR2934953.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934953.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	434273
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15553	3.581387744575417	No Hit
CCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	3211	0.7393966468097257	No Hit
GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	2680	0.6171233302553923	No Hit
CTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGCT	1890	0.435210109769661	No Hit
TCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	1263	0.2908308828778211	No Hit
CGCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG	1013	0.23326340804056436	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCC	899	0.20701263951477528	No Hit
ACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC	791	0.18214349038508035	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	702	0.16164946934301694	No Hit
ACCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG	476	0.10960847209013685	No Hit
GCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG	468	0.10776631289534463	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCCTTG	20	7.028432E-4	45.000004	14
GTCATGC	20	7.028432E-4	45.000004	14
AGGTATC	20	7.028432E-4	45.000004	9
AACGTCG	30	2.162371E-6	45.000004	1
ACAGTCC	20	7.028432E-4	45.000004	30
ACTGATC	20	7.028432E-4	45.000004	17
CGTGCTC	20	7.028432E-4	45.000004	28
TAGAATG	20	7.028432E-4	45.000004	2
TTATGCG	20	7.028432E-4	45.000004	1
AGCCAAT	20	7.028432E-4	45.000004	30
ACATTAC	20	7.028432E-4	45.000004	12
TACGGGT	30	2.162371E-6	45.000004	4
CGTTAGG	40	6.7975634E-9	45.000004	2
TACGCCA	20	7.028432E-4	45.000004	36
TCTACGT	20	7.028432E-4	45.000004	24
AGGTTCC	20	7.028432E-4	45.000004	15
GCTTACT	30	2.162371E-6	45.000004	15
GCCCTAT	20	7.028432E-4	45.000004	23
GCTAGTC	40	6.7975634E-9	45.000004	27
GCGATAT	20	7.028432E-4	45.000004	9