##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934946.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 572151 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5441185980624 34.0 31.0 34.0 31.0 34.0 2 32.704249402692646 34.0 31.0 34.0 31.0 34.0 3 32.75628286938238 34.0 31.0 34.0 31.0 34.0 4 36.16135251008912 37.0 37.0 37.0 35.0 37.0 5 36.05690980178309 37.0 35.0 37.0 35.0 37.0 6 36.04078468795825 37.0 35.0 37.0 35.0 37.0 7 36.207990547949755 37.0 37.0 37.0 35.0 37.0 8 36.20700304639859 37.0 37.0 37.0 35.0 37.0 9 38.0065961608037 39.0 39.0 39.0 35.0 39.0 10 37.60030306684774 39.0 38.0 39.0 35.0 39.0 11 37.50666345073241 39.0 37.0 39.0 35.0 39.0 12 37.385990761180175 39.0 37.0 39.0 35.0 39.0 13 37.29762248077868 39.0 37.0 39.0 34.0 39.0 14 38.559693157925096 40.0 38.0 41.0 34.0 41.0 15 38.64356961711157 40.0 38.0 41.0 34.0 41.0 16 38.73253214623412 40.0 38.0 41.0 35.0 41.0 17 38.74351700862185 40.0 38.0 41.0 35.0 41.0 18 38.237891745360926 39.0 38.0 40.0 35.0 41.0 19 37.746505730130686 38.0 37.0 40.0 35.0 41.0 20 37.16244837464236 38.0 35.0 40.0 34.0 41.0 21 37.090589721944035 38.0 35.0 40.0 34.0 41.0 22 36.904076021889324 38.0 35.0 40.0 34.0 41.0 23 36.77190287179433 37.0 35.0 40.0 33.0 41.0 24 36.56995793068613 37.0 35.0 40.0 33.0 41.0 25 36.420081412074786 37.0 35.0 40.0 33.0 41.0 26 36.5555578859427 37.0 35.0 40.0 33.0 41.0 27 36.55718682655453 37.0 35.0 40.0 33.0 41.0 28 36.5088866400653 37.0 35.0 40.0 33.0 41.0 29 36.36811785699929 37.0 35.0 40.0 33.0 41.0 30 36.040688559488665 37.0 35.0 40.0 32.0 41.0 31 35.487392314266685 37.0 35.0 40.0 30.0 41.0 32 34.67204636538256 37.0 35.0 40.0 23.0 41.0 33 33.77253557190322 37.0 34.0 40.0 16.0 41.0 34 33.07370956268537 37.0 33.0 40.0 12.0 41.0 35 32.51878787243228 36.0 33.0 40.0 10.0 41.0 36 32.31695828548757 36.0 32.0 40.0 8.0 41.0 37 32.0900583936758 36.0 31.0 40.0 8.0 41.0 38 31.918240114934694 36.0 31.0 40.0 8.0 41.0 39 31.88917436131371 36.0 31.0 40.0 8.0 41.0 40 31.703772255925447 36.0 30.0 40.0 7.0 41.0 41 31.47999916106063 35.0 29.0 40.0 7.0 41.0 42 31.32477964733086 35.0 28.0 40.0 7.0 41.0 43 31.23358868550435 35.0 28.0 40.0 7.0 41.0 44 31.14388159769012 35.0 27.0 40.0 7.0 41.0 45 31.094319506563828 35.0 27.0 40.0 7.0 41.0 46 31.019057906042285 35.0 27.0 40.0 7.0 41.0 47 30.958407832897258 35.0 26.0 40.0 7.0 41.0 48 30.895036450167876 35.0 26.0 40.0 7.0 41.0 49 30.79237823581537 35.0 26.0 40.0 7.0 41.0 50 30.691191660942653 35.0 26.0 40.0 7.0 41.0 51 30.04709945451463 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 1.0 10 7.0 11 6.0 12 9.0 13 10.0 14 22.0 15 30.0 16 47.0 17 112.0 18 188.0 19 401.0 20 646.0 21 1085.0 22 1808.0 23 3109.0 24 6212.0 25 13151.0 26 23492.0 27 29107.0 28 26434.0 29 20584.0 30 16273.0 31 14703.0 32 14447.0 33 18465.0 34 33201.0 35 46954.0 36 45561.0 37 55991.0 38 94571.0 39 105455.0 40 65.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.411641332445456 14.8778906267751 17.836025804376817 37.87444223640263 2 51.46770695148658 17.521598319324795 17.563370508834204 13.447324220354417 3 23.39871817055288 17.3940096233337 45.930357545473136 13.276914660640285 4 21.049513152996326 18.995509926575327 45.80818699958578 14.146789920842576 5 18.27961499674037 21.790751042993893 44.62668071890113 15.302953241364605 6 19.859093141495865 23.899634886594622 43.903794627642 12.33747734426751 7 58.10022179459619 4.394294513161736 33.32476916058872 4.180714531653358 8 57.971060087284656 3.963114632326082 33.41233345742645 4.6534918229628195 9 54.081876987019164 5.243196289091516 35.339621883034376 5.335304840854949 10 30.022144503811056 18.61204472245963 40.23518267030906 11.130628103420252 11 23.379317697600808 17.813129750712662 43.61523443985941 15.192318111827122 12 21.398546887097986 15.36132943925642 48.251423138297405 14.988700535348187 13 16.75134710941692 19.69724775452634 48.71458758264864 14.836817553408105 14 13.664399782574879 21.798616099596085 48.02386083394069 16.513123283888344 15 12.183322234864573 18.38972578917104 53.514369458412204 15.912582517552185 16 14.032309652521798 17.531385945318632 50.948787994777604 17.487516407381968 17 13.922723197197943 18.09312576575065 47.375255832813366 20.608895204238042 18 15.843020461381698 17.061405118578836 49.47452682945586 17.621047590583604 19 16.598590232298815 18.76847195932542 46.75181901281305 17.88111879556271 20 17.633107344040297 19.516176673640352 46.85144306310747 15.999272919211888 21 16.699437735842462 19.3532826124572 47.89504868470037 16.05223096699997 22 15.830611149853796 18.269477812675326 46.21472303640123 19.685188001069648 23 15.02400590054024 19.35607907702687 47.12846783454018 18.491447187892707 24 16.83384281422212 17.555155894160805 48.293894443949235 17.317106847667834 25 15.465148186405337 19.01753208506146 46.619686061896246 18.897633666636953 26 14.800288734966818 20.702576767321915 46.62021039900306 17.87692409870821 27 15.686942782587115 21.054406965993245 46.47951327534165 16.779136976077993 28 13.237764156664936 19.881464858053207 48.09150032071953 18.789270664562327 29 15.410966685368024 19.583990939454797 46.46046236046079 18.544580014716395 30 16.96248018442684 20.632665153080218 45.27633439424208 17.128520268250863 31 18.410699273443548 21.718567301289347 41.698083198316525 18.17265022695058 32 18.36123680636755 22.804644228534077 41.03060206134395 17.803516903754428 33 18.336592962347353 23.907499943196814 38.817899470594305 18.938007623861534 34 18.585478309047787 23.053005238127696 38.566217659324195 19.79529879350032 35 19.002326308963895 24.29306249573976 36.85285877329586 19.851752422000484 36 21.394352190243485 26.22541951338021 34.215617905063525 18.16461039131278 37 18.838383573567118 26.738046424807436 36.012870728181895 18.410699273443548 38 17.55323332476916 28.39180565969473 34.05656898266366 19.99839203287244 39 20.34078416362114 25.952065101695183 35.260796537976866 18.446354196706814 40 21.794421402741584 24.220354416928398 35.903808609964855 18.081415570365166 41 18.15831834603103 25.77466438055688 34.46380413562154 21.603213137790547 42 18.77860914339047 25.83478836880474 34.348974309229554 21.037628178575236 43 19.43036016715867 26.198503541897157 34.078765920185404 20.292370370758768 44 18.53828796943464 25.662281460663355 34.161436404026205 21.63799416587579 45 19.248939528201472 24.9752250717031 33.48591543141583 22.289919968679598 46 20.339385931336306 24.900769202535695 35.11957507720864 19.64026978891936 47 17.4807000249934 24.085425001441926 38.52182378428072 19.912051189283947 48 17.15403800744908 23.42301245650187 38.103577552079784 21.31937198396927 49 18.65906028303717 22.53216371202707 38.66811383708147 20.14066216785429 50 18.295170330909148 22.4302675342698 37.62678034295142 21.647781791869626 51 16.93748678233543 22.529192468421797 35.80488367581285 24.728437073429916 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 714.0 1 831.0 2 948.0 3 23100.5 4 45253.0 5 30689.0 6 16125.0 7 15677.5 8 15230.0 9 15283.0 10 15336.0 11 14786.5 12 14237.0 13 13255.0 14 12273.0 15 11202.5 16 10132.0 17 9133.0 18 8134.0 19 7293.5 20 6453.0 21 5865.5 22 5278.0 23 4950.0 24 4622.0 25 4496.5 26 4546.0 27 4721.0 28 5010.0 29 5299.0 30 5404.0 31 5509.0 32 6284.0 33 7059.0 34 8419.0 35 9779.0 36 10294.0 37 10809.0 38 11950.5 39 13092.0 40 14867.0 41 16642.0 42 19085.5 43 21529.0 44 26254.0 45 30979.0 46 34712.0 47 38445.0 48 43546.0 49 48647.0 50 47944.0 51 47241.0 52 40723.0 53 34205.0 54 29704.5 55 25204.0 56 22792.5 57 20381.0 58 18766.0 59 17151.0 60 16479.5 61 15808.0 62 14149.5 63 12491.0 64 11559.5 65 10628.0 66 8440.0 67 6252.0 68 5163.5 69 4075.0 70 3363.0 71 2651.0 72 2175.0 73 1699.0 74 1541.0 75 1042.5 76 702.0 77 549.5 78 397.0 79 280.5 80 164.0 81 95.5 82 27.0 83 40.5 84 54.0 85 35.0 86 16.0 87 8.5 88 1.0 89 1.0 90 1.0 91 2.5 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 572151.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.0967077527176 #Duplication Level Percentage of deduplicated Percentage of total 1 77.2200028082662 27.873878740340174 2 10.093891659221613 7.287125146210327 3 3.9076345268564356 4.23158224561097 4 1.9607130156318109 2.831011388488444 5 1.086630827649062 1.9611897710370922 6 0.682350131071297 1.4778355959785494 7 0.47728459061309875 1.2059881667565542 8 0.33630601366373575 0.9711631912561056 9 0.26942098419828553 0.8752689476149553 >10 3.4763164756323883 32.14261635399031 >50 0.43961595743114346 9.834668823319383 >100 0.04489904840203951 3.120664018872522 >500 0.0024669806814307423 0.595031302765272 >1k 0.0019735845451445935 1.3597916781241697 >5k 0.0 0.0 >10k+ 4.933961362861484E-4 4.232184629635186 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23763 4.153274223063492 No Hit CCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGC 2900 0.5068592032522883 TruSeq Adapter, Index 15 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGC 2146 0.37507581040669336 TruSeq Adapter, Index 15 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGCT 1550 0.27090750518656787 TruSeq Adapter, Index 21 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTG 1039 0.1815954179928026 TruSeq Adapter, Index 21 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCC 848 0.14821262219239326 No Hit TCTGTCTCTTATACACATCTGACGCGACAGGTATCGTATGCCGTCTTCTGC 770 0.13457985741526277 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 626 0.10941167628825259 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.495580712084747E-4 0.0 0.0 0.29380355885072296 0.0 2 3.495580712084747E-4 0.0 0.0 1.4849226864936005 0.0 3 3.495580712084747E-4 0.0 0.0 2.053828447385393 0.0 4 3.495580712084747E-4 0.0 0.0 2.6043824095387405 0.0 5 3.495580712084747E-4 0.0 0.0 3.994225300663636 0.0 6 3.495580712084747E-4 0.0 0.0 4.700682162575963 0.0 7 3.495580712084747E-4 0.0 0.0 5.521444513773462 0.0 8 3.495580712084747E-4 0.0 0.0 6.690191924858997 0.0 9 3.495580712084747E-4 0.0 0.0 7.10529213441906 0.0 10 3.495580712084747E-4 0.0 0.0 8.045778125005462 0.0 11 3.495580712084747E-4 0.0 0.0 9.506756083621282 0.0 12 3.495580712084747E-4 0.0 0.0 10.661521171858478 0.0 13 3.495580712084747E-4 0.0 0.0 11.111751967574993 0.0 14 5.24337106812712E-4 0.0 0.0 11.29719252435109 0.0 15 5.24337106812712E-4 0.0 0.0 11.654790431197359 0.0 16 5.24337106812712E-4 0.0 0.0 12.445840346342138 0.0 17 5.24337106812712E-4 0.0 0.0 13.338262102137373 0.0 18 5.24337106812712E-4 0.0 0.0 14.286263591254755 0.0 19 5.24337106812712E-4 0.0 0.0 14.839264459906563 0.0 20 5.24337106812712E-4 0.0 0.0 15.39313922373639 0.0 21 5.24337106812712E-4 0.0 0.0 16.033354831154714 0.0 22 5.24337106812712E-4 0.0 0.0 16.694718701881147 0.0 23 5.24337106812712E-4 0.0 0.0 17.369016221242294 0.0 24 5.24337106812712E-4 0.0 0.0 17.913452917149495 0.0 25 5.24337106812712E-4 0.0 0.0 18.38308418581808 0.0 26 5.24337106812712E-4 0.0 0.0 18.81583707797417 0.0 27 5.24337106812712E-4 0.0 0.0 19.24474483134697 0.0 28 5.24337106812712E-4 0.0 0.0 19.685537559140855 0.0 29 5.24337106812712E-4 0.0 0.0 20.15272192131098 0.0 30 5.24337106812712E-4 0.0 0.0 20.649443940498227 0.0 31 5.24337106812712E-4 0.0 0.0 21.12938717226746 0.0 32 6.991161424169494E-4 0.0 0.0 21.54606039314796 0.0 33 6.991161424169494E-4 0.0 0.0 21.98528010962141 0.0 34 6.991161424169494E-4 0.0 0.0 22.412789630709376 0.0 35 6.991161424169494E-4 0.0 0.0 22.875779296025 0.0 36 8.738951780211867E-4 0.0 0.0 23.31132865275076 0.0 37 8.738951780211867E-4 0.0 0.0 23.73324524469939 0.0 38 8.738951780211867E-4 0.0 0.0 24.165473799748668 0.0 39 8.738951780211867E-4 0.0 0.0 24.610286445361453 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGATG 30 2.1635824E-6 45.000004 9 GCGATAT 30 2.1635824E-6 45.000004 9 TTCGACC 30 2.1635824E-6 45.000004 22 TGTAACG 30 2.1635824E-6 45.000004 1 CGGGTAC 35 1.210501E-7 45.0 6 CACGGAT 20 7.0303126E-4 45.0 4 CCAGCGT 35 1.210501E-7 45.0 23 CGATTGC 20 7.0303126E-4 45.0 11 CGATTGA 25 3.888342E-5 45.0 10 TACGGAC 20 7.0303126E-4 45.0 9 CGCTAAG 20 7.0303126E-4 45.0 1 ACCAGTT 20 7.0303126E-4 45.0 12 CCGAGGT 20 7.0303126E-4 45.0 31 GTCCGTT 20 7.0303126E-4 45.0 9 TGTTACG 20 7.0303126E-4 45.0 1 ACGCTTT 20 7.0303126E-4 45.0 11 AATTACG 20 7.0303126E-4 45.0 19 CGTCGCT 20 7.0303126E-4 45.0 32 GACGCTT 20 7.0303126E-4 45.0 10 GTCCCGC 25 3.888342E-5 45.0 15 >>END_MODULE