##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934942.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 722164 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.4322134584388 34.0 31.0 34.0 30.0 34.0 2 32.59966157271755 34.0 31.0 34.0 31.0 34.0 3 32.66550672700384 34.0 31.0 34.0 31.0 34.0 4 36.12401061254784 37.0 35.0 37.0 35.0 37.0 5 35.998010147279565 37.0 35.0 37.0 35.0 37.0 6 35.95265618336001 37.0 35.0 37.0 35.0 37.0 7 36.14466797015636 37.0 35.0 37.0 35.0 37.0 8 36.05112966029877 37.0 36.0 37.0 35.0 37.0 9 37.91787876438039 39.0 38.0 39.0 35.0 39.0 10 37.47682797813239 39.0 37.0 39.0 34.0 39.0 11 37.32236998798057 39.0 37.0 39.0 34.0 39.0 12 37.291065464354354 39.0 37.0 39.0 34.0 39.0 13 37.19337851236007 39.0 37.0 39.0 33.0 39.0 14 38.445494375238866 40.0 38.0 41.0 34.0 41.0 15 38.4610559374325 40.0 38.0 41.0 34.0 41.0 16 38.627109631607226 40.0 38.0 41.0 34.0 41.0 17 38.5576406467229 40.0 38.0 41.0 34.0 41.0 18 38.13799774012551 39.0 38.0 40.0 34.0 41.0 19 37.66584044621443 38.0 37.0 40.0 34.0 41.0 20 36.998314787222846 38.0 35.0 40.0 34.0 41.0 21 37.0099797275965 38.0 35.0 40.0 34.0 41.0 22 36.86567594064506 38.0 35.0 40.0 33.0 41.0 23 36.638748262167596 37.0 35.0 40.0 33.0 41.0 24 36.45285142986911 37.0 35.0 40.0 33.0 41.0 25 36.347038899751304 37.0 35.0 40.0 33.0 41.0 26 36.52852122232623 37.0 35.0 40.0 33.0 41.0 27 36.47095673558915 37.0 35.0 40.0 33.0 41.0 28 36.4603414182928 37.0 35.0 40.0 33.0 41.0 29 36.351659733800076 37.0 35.0 40.0 33.0 41.0 30 36.001243484859394 37.0 35.0 40.0 31.0 41.0 31 35.543557972981205 37.0 35.0 40.0 30.0 41.0 32 34.653199273295265 37.0 35.0 40.0 21.0 41.0 33 33.69687910225378 37.0 34.0 40.0 15.0 41.0 34 32.977442796927015 37.0 33.0 40.0 10.0 41.0 35 32.42524551209974 37.0 31.0 40.0 9.0 41.0 36 32.25636282063354 37.0 31.0 40.0 8.0 41.0 37 32.047858935089536 37.0 31.0 40.0 8.0 41.0 38 31.922370818816777 37.0 30.0 40.0 8.0 41.0 39 31.937900532289063 37.0 30.0 40.0 8.0 41.0 40 31.77375222248686 37.0 30.0 40.0 7.0 41.0 41 31.607644523958548 37.0 29.0 40.0 7.0 41.0 42 31.473270614431073 37.0 28.0 40.0 7.0 41.0 43 31.389088905013267 37.0 27.0 40.0 7.0 41.0 44 31.34434283625326 37.0 27.0 40.0 7.0 41.0 45 31.30391573105278 37.0 26.0 40.0 7.0 41.0 46 31.21500379415202 36.0 26.0 40.0 7.0 41.0 47 31.067726998299555 36.0 26.0 40.0 7.0 41.0 48 31.017814513046897 36.0 25.0 40.0 7.0 41.0 49 30.9460731911311 36.0 25.0 40.0 7.0 41.0 50 30.846687179089514 36.0 24.0 40.0 7.0 41.0 51 30.200160905279134 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 1.0 10 2.0 11 2.0 12 7.0 13 10.0 14 9.0 15 21.0 16 58.0 17 134.0 18 265.0 19 554.0 20 1232.0 21 2075.0 22 3267.0 23 5185.0 24 9375.0 25 18542.0 26 31418.0 27 36530.0 28 31595.0 29 24384.0 30 20063.0 31 18088.0 32 18951.0 33 22676.0 34 37762.0 35 54309.0 36 51200.0 37 66833.0 38 121112.0 39 146407.0 40 95.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.392326396774145 13.403742086285108 17.578278618153217 34.625652898787536 2 48.285707955533645 23.080629884624546 17.133365828260615 11.500296331581191 3 20.79901518214699 23.297339662458942 43.99956242626329 11.904082729130778 4 19.760469920959782 18.089935250164782 49.45123268398868 12.698362144886758 5 22.377880924554532 20.837372120460174 42.6447455148692 14.140001440116096 6 17.984557524329652 27.95251494120449 43.00657468386682 11.056352850599033 7 55.6880431591716 3.802460382960103 36.760071119579486 3.7494253382888094 8 55.10133432295158 8.229986540453416 32.0675082114312 4.601170925163813 9 51.31645997308091 5.17680194526451 32.81276829085914 10.693969790795443 10 29.854575968893492 20.58119762270066 39.37512808724888 10.189098321156967 11 22.57991259603082 17.35159880581142 46.386139436471495 13.682349161686266 12 18.938357492203988 15.508942567062329 48.44882879789078 17.103871142842898 13 16.59318381974178 20.19153544070322 51.2058202845891 12.009460454965907 14 13.991835649520054 24.874266787045602 45.70845403537147 15.425443528062877 15 11.459446884641162 19.165175777247274 54.786031981655135 14.589345356456429 16 13.166815294032935 19.611888712259265 47.87112068726771 19.350175306440086 17 12.459081316709224 20.86022011620629 48.309525260190206 18.371173306894278 18 13.483225416941305 19.360699231753454 49.22981483430357 17.926260517001676 19 14.775868085365651 20.467926952880507 46.102824289219626 18.65338067253422 20 16.559258007876327 20.56001129937244 49.19630444054259 13.68442625220864 21 15.705850748583424 23.617350075606094 47.12738380755618 13.549415368254303 22 13.992528013027512 18.615854570429985 47.643333093313984 19.748284323228518 23 13.528921408433542 22.481873923374746 46.95415445799015 17.03505021020156 24 15.472662719271524 18.699907500235405 47.65538021834376 18.17204956214932 25 12.775491439617594 24.513268454256927 45.34163984912015 17.36960025700533 26 14.138616713101179 20.615677325372076 47.61923884325444 17.626467118272306 27 16.19701342077423 21.660038440021935 46.60395699591782 15.538991143286013 28 13.172908092898567 20.37625802449305 49.71820805246453 16.732625830143846 29 16.391013675564 17.595726178541163 47.118106136556236 18.8951540093386 30 14.91960274951396 22.81310062534272 47.39408223062905 14.873214394514264 31 20.28029644235935 19.976764280689704 41.5051151815931 18.23782409535784 32 18.547172110490138 22.870428323760255 41.41441556211608 17.167984003633524 33 16.881760929650326 24.483912241540704 39.54974216382982 19.084584664979147 34 21.409264377620595 22.509568463673073 37.56501293335032 18.51615422535601 35 16.8789914756205 23.16856005007173 39.817825313917616 20.13462316039016 36 21.92673686309481 26.400512902886327 35.434195002797146 16.238555231221717 37 17.77851014451011 23.7462681606948 40.07801552002038 18.397206174774706 38 17.870179072897567 27.576838502057704 34.344414842058036 20.20856758298669 39 19.520496729274793 26.17383309054453 34.83377736912945 19.47189281105123 40 19.167806758575615 24.885621548567915 37.92074930348231 18.025822389374156 41 19.938545815078015 26.03688358876931 34.01858857544824 20.005982020704437 42 18.85015038135382 23.12452573099739 38.150890933361396 19.874432954287393 43 20.53107050476069 25.7657540392487 33.57173716773475 20.131438288255854 44 18.82550224048831 23.924482527514527 35.84753601674966 21.402479215247507 45 18.143524185642043 23.26798344974272 34.559462947474536 24.029029417140706 46 22.12655297134723 24.7668119706881 34.1283974277311 18.978237630233576 47 16.28563594972887 23.947468995962137 40.74794644983688 19.018948604472115 48 18.64091812939997 23.581901064024237 36.1247583651359 21.652422441439896 49 17.97652610764314 21.03857295572751 40.616535856121324 20.368365080508028 50 18.455918600207156 22.060086074631247 37.76482904160274 21.71916628355886 51 17.718274519361252 21.993480705213774 34.51016666574351 25.778078109681456 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 400.0 1 528.0 2 656.0 3 23960.5 4 47265.0 5 32495.0 6 17725.0 7 17585.5 8 17446.0 9 17754.0 10 18062.0 11 17843.0 12 17624.0 13 16621.0 14 15618.0 15 14516.5 16 13415.0 17 12333.0 18 11251.0 19 10505.5 20 9760.0 21 8703.0 22 7646.0 23 7256.5 24 6867.0 25 6815.5 26 7297.0 27 7830.0 28 8026.5 29 8223.0 30 9323.0 31 10423.0 32 11167.0 33 11911.0 34 13122.0 35 14333.0 36 15622.5 37 16912.0 38 18980.0 39 21048.0 40 23065.5 41 25083.0 42 29259.5 43 33436.0 44 38245.5 45 43055.0 46 63600.5 47 84146.0 48 75212.0 49 66278.0 50 64262.5 51 62247.0 52 50356.5 53 38466.0 54 32999.5 55 27533.0 56 23316.5 57 19100.0 58 16351.5 59 13603.0 60 11656.5 61 9710.0 62 8095.0 63 6480.0 64 5645.0 65 4810.0 66 3919.5 67 3029.0 68 2452.0 69 1875.0 70 1517.0 71 1159.0 72 830.5 73 502.0 74 370.0 75 165.0 76 92.0 77 72.5 78 53.0 79 66.5 80 80.0 81 43.0 82 6.0 83 3.5 84 1.0 85 1.0 86 1.0 87 0.5 88 0.0 89 1.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 722164.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.31455332710512 #Duplication Level Percentage of deduplicated Percentage of total 1 77.04907769208864 26.439046852694414 2 10.03302135554701 6.885572926738048 3 4.035446825117103 4.1542366583753365 4 2.0895359750657336 2.868059745811909 5 1.2420553769827347 2.1310287734345854 6 0.7810790562486551 1.6081427356997648 7 0.5406252807062559 1.29859205173432 8 0.3780513799549909 1.0378131390280974 9 0.27497493003661316 0.8492077710322525 >10 2.872861970045734 24.07050891044678 >50 0.6297389909913805 13.880782463704447 >100 0.0653153943419927 3.919964654290067 >500 0.002053943218301657 0.4025825830721144 >1k 0.004518675080263645 3.046010867508866 >5k 0.0012323659309809941 3.7947919183768883 >10k+ 4.107886436603314E-4 3.613657948052075 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25636 3.549886175439374 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCG 9761 1.3516320392597803 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGC 9724 1.34650854930459 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTC 7436 1.0296830082917454 No Hit GCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 4464 0.6181421394586271 TruSeq Adapter, Index 15 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 3287 0.455159769802981 TruSeq Adapter, Index 15 (95% over 23bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGCAGTAT 3037 0.42054159443007405 No Hit CTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGCT 1970 0.272791221938507 TruSeq Adapter, Index 14 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCT 1686 0.2334649747148847 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGCAGTATCGTA 1608 0.2226641039985377 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTC 1310 0.1813992389540326 No Hit GAACTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCT 1229 0.17018295013321072 No Hit CGCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTG 1010 0.13985742850654423 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCC 1005 0.13916506499908607 No Hit TCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 1003 0.1388881195961028 TruSeq Adapter, Index 15 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3847270149162794E-4 0.0 0.0 0.28968489152048565 0.0 2 1.3847270149162794E-4 0.0 0.0 1.6890900127948776 0.0 3 1.3847270149162794E-4 0.0 0.0 2.2559972527016026 0.0 4 1.3847270149162794E-4 0.0 0.0 3.0041652588608683 0.0 5 1.3847270149162794E-4 0.0 0.0 5.469117818113337 0.0 6 1.3847270149162794E-4 0.0 0.0 6.142787510870107 0.0 7 1.3847270149162794E-4 0.0 0.0 7.098664569266814 0.0 8 1.3847270149162794E-4 0.0 0.0 8.407785489168665 0.0 9 1.3847270149162794E-4 0.0 0.0 8.78166178319606 0.0 10 1.3847270149162794E-4 0.0 0.0 11.082662663882441 0.0 11 1.3847270149162794E-4 0.0 0.0 12.3899834386649 0.0 12 1.3847270149162794E-4 0.0 0.0 14.9305420929318 0.0 13 1.3847270149162794E-4 0.0 0.0 15.386394226242238 0.0 14 1.3847270149162794E-4 0.0 0.0 15.585933389091675 0.0 15 1.3847270149162794E-4 0.0 0.0 16.118083980924002 0.0 16 1.3847270149162794E-4 0.0 0.0 16.826925739859643 0.0 17 1.3847270149162794E-4 0.0 0.0 17.73087553519699 0.0 18 1.3847270149162794E-4 0.0 0.0 18.720262987354673 0.0 19 1.3847270149162794E-4 0.0 0.0 19.77819442675071 0.0 20 2.769454029832559E-4 0.0 0.0 20.40339867398541 0.0 21 2.769454029832559E-4 0.0 0.0 21.01669426889183 0.0 22 2.769454029832559E-4 0.0 0.0 21.74312206091691 0.0 23 2.769454029832559E-4 0.0 0.0 22.467195817016634 0.0 24 2.769454029832559E-4 0.0 0.0 23.004746844207133 0.0 25 2.769454029832559E-4 0.0 0.0 23.48843199051739 0.0 26 2.769454029832559E-4 0.0 0.0 23.90440398579824 0.0 27 2.769454029832559E-4 0.0 0.0 24.367456699586242 0.0 28 2.769454029832559E-4 0.0 0.0 24.809738508150502 0.0 29 2.769454029832559E-4 0.0 0.0 25.265036750654975 0.0 30 2.769454029832559E-4 0.0 0.0 25.82585119169607 0.0 31 4.154181044748838E-4 0.0 0.0 26.314798300663007 0.0 32 4.154181044748838E-4 0.0 0.0 26.763034435391408 0.0 33 4.154181044748838E-4 0.0 0.0 27.201023590209427 0.0 34 4.154181044748838E-4 0.0 0.0 27.636658709102086 0.0 35 4.154181044748838E-4 0.0 0.0 28.115912728964613 0.0 36 4.154181044748838E-4 0.0 0.0 28.57148791687207 0.0 37 4.154181044748838E-4 0.0 0.0 28.986075185138002 0.0 38 4.154181044748838E-4 0.0 0.0 29.41547903246354 0.0 39 4.154181044748838E-4 0.0 0.0 29.849729424341284 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTGCGG 60 0.0 45.000004 2 GCGACAA 30 2.1643773E-6 45.000004 11 ATTAGCG 30 2.1643773E-6 45.000004 1 GCGAAGA 30 2.1643773E-6 45.000004 12 CTGAGCG 30 2.1643773E-6 45.000004 1 CTGCGAA 30 2.1643773E-6 45.000004 10 CATCGAA 30 2.1643773E-6 45.000004 42 TTACGAG 30 2.1643773E-6 45.000004 1 GCGCTTC 55 1.8189894E-12 45.000004 25 TAGTGCG 30 2.1643773E-6 45.000004 1 TGTTTCG 20 7.0315425E-4 45.0 16 AACCGTC 20 7.0315425E-4 45.0 19 AACCGCG 20 7.0315425E-4 45.0 15 GGTGTCG 20 7.0315425E-4 45.0 12 CACGGTG 20 7.0315425E-4 45.0 43 GCGAACC 20 7.0315425E-4 45.0 33 CGTGATA 20 7.0315425E-4 45.0 22 TAGCGGC 20 7.0315425E-4 45.0 13 TAGCGAC 20 7.0315425E-4 45.0 29 ATAGCGA 20 7.0315425E-4 45.0 28 >>END_MODULE