##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934935.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1264702 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.621389861010734 34.0 31.0 34.0 31.0 34.0 2 32.77954253254917 34.0 31.0 34.0 31.0 34.0 3 32.83097441136331 34.0 31.0 34.0 31.0 34.0 4 36.21300828179287 37.0 37.0 37.0 35.0 37.0 5 36.10679274643355 37.0 35.0 37.0 35.0 37.0 6 36.110090756557675 37.0 36.0 37.0 35.0 37.0 7 36.247838621272045 37.0 37.0 37.0 35.0 37.0 8 36.27508377467577 37.0 37.0 37.0 35.0 37.0 9 38.068163883665875 39.0 39.0 39.0 37.0 39.0 10 37.60139938103996 39.0 38.0 39.0 35.0 39.0 11 37.51856801048785 39.0 37.0 39.0 35.0 39.0 12 37.47345303478606 39.0 37.0 39.0 35.0 39.0 13 37.43621975769786 39.0 37.0 39.0 35.0 39.0 14 38.75191942449684 40.0 38.0 41.0 35.0 41.0 15 38.79798798452126 40.0 38.0 41.0 35.0 41.0 16 38.87880623261448 40.0 38.0 41.0 35.0 41.0 17 38.87561022280347 40.0 38.0 41.0 35.0 41.0 18 38.35785347061996 39.0 38.0 41.0 35.0 41.0 19 37.87995037566162 38.0 37.0 41.0 35.0 41.0 20 37.30648405711385 38.0 35.0 41.0 34.0 41.0 21 37.24973472011588 38.0 35.0 41.0 34.0 41.0 22 37.076160233794205 38.0 35.0 40.0 34.0 41.0 23 36.97385629183792 38.0 35.0 40.0 34.0 41.0 24 36.77029292275967 37.0 35.0 40.0 33.0 41.0 25 36.62268265567699 37.0 35.0 40.0 33.0 41.0 26 36.7334486701215 37.0 35.0 40.0 33.0 41.0 27 36.78317738091661 38.0 35.0 40.0 33.0 41.0 28 36.723712779769464 38.0 35.0 40.0 33.0 41.0 29 36.5978475561832 38.0 35.0 40.0 33.0 41.0 30 36.2830318920979 38.0 35.0 40.0 33.0 41.0 31 35.766832819114704 38.0 35.0 40.0 31.0 41.0 32 35.04886763838438 38.0 35.0 40.0 23.0 41.0 33 34.09895848982606 38.0 34.0 40.0 17.0 41.0 34 33.31518650243299 38.0 33.0 40.0 12.0 41.0 35 32.805702845413386 38.0 33.0 41.0 10.0 41.0 36 32.57787684371496 38.0 32.0 41.0 8.0 41.0 37 32.359744825263185 37.0 31.0 40.0 8.0 41.0 38 32.20775091681677 37.0 31.0 40.0 8.0 41.0 39 32.14100159563281 37.0 31.0 40.0 8.0 41.0 40 32.00479401471651 37.0 30.0 40.0 7.0 41.0 41 31.881198100422075 37.0 30.0 40.0 7.0 41.0 42 31.761955780887515 37.0 29.0 40.0 7.0 41.0 43 31.660952540598498 37.0 29.0 40.0 7.0 41.0 44 31.552243137118467 37.0 28.0 40.0 7.0 41.0 45 31.5133335758147 36.0 27.0 40.0 7.0 41.0 46 31.463927470661073 36.0 27.0 40.0 7.0 41.0 47 31.46031950609709 36.0 27.0 40.0 7.0 41.0 48 31.421709620131857 36.0 27.0 40.0 7.0 41.0 49 31.3146314309616 36.0 27.0 40.0 7.0 41.0 50 31.22191235563793 35.0 27.0 40.0 7.0 41.0 51 30.674639559358646 35.0 25.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 6.0 10 8.0 11 10.0 12 15.0 13 23.0 14 21.0 15 53.0 16 94.0 17 198.0 18 414.0 19 746.0 20 1420.0 21 2142.0 22 3491.0 23 6121.0 24 11877.0 25 26303.0 26 48842.0 27 63510.0 28 59925.0 29 47898.0 30 37525.0 31 32115.0 32 31036.0 33 36719.0 34 65175.0 35 89019.0 36 87108.0 37 109751.0 38 211206.0 39 291728.0 40 199.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.18244930426298 15.821276474616155 18.983128041230266 37.0131461798906 2 50.513796926074285 18.146330123618053 18.693415523973236 12.646457426334425 3 22.88428420291895 17.989771503484615 46.39559358647333 12.730350707123101 4 21.529893998744367 19.117388918496214 46.01653195772601 13.336185125033406 5 18.3852006243368 21.983834927121173 44.95383102106267 14.677133427479358 6 19.60635786137762 24.664782691891055 44.20480081473738 11.52405863199394 7 59.11613961233555 4.704270254969154 32.56253251754168 3.6170576151536094 8 60.924391674876766 3.5583876676086543 31.819037211928187 3.6981834455863916 9 56.663625106942185 5.045061998794973 33.63108463495749 4.660228259305354 10 29.757840186858246 18.62699671543178 39.69757302510789 11.917590072602083 11 23.153359447522025 19.62288349350282 43.336216753037476 13.887540305937684 12 21.452721668820008 16.937586878173672 46.59239884178249 15.017292611223828 13 17.582640021127506 19.073267852822244 47.39401060486976 15.950081521180485 14 14.213941307912853 21.408363393115533 46.84652985446374 17.531165444507877 15 13.858679752226216 19.74014431858256 51.31137611864297 15.089799810548254 16 16.05627254483665 18.867843966404735 49.41258889445893 15.663294594299684 17 15.842546307351455 18.334595817829022 46.732906249851744 19.089951624967778 18 16.138663495432127 19.805535216991828 47.77070013331204 16.28510115426401 19 18.217730342800124 19.964703147460824 46.12960207226683 15.687964437472226 20 19.197091488745965 20.24168539308074 46.004829596221086 14.556393521952208 21 17.770273155257126 20.05207550869691 46.78825525696963 15.389396079076336 22 16.43746906385852 19.475576064559082 46.060415813369474 18.026539058212922 23 15.963839702949786 19.91148903061749 46.83182283257242 17.292848433860307 24 17.277113501836798 18.139688242763906 48.00419387333933 16.579004382059964 25 16.065444666016184 19.71840006578625 46.13679744319215 18.079357825005417 26 14.954352883129781 22.125291175312444 46.165104506832435 16.755251434725334 27 16.23750100814263 21.451456548657312 46.1406718736904 16.170370569509654 28 14.198048235869004 21.158423090973212 47.39630363516465 17.24722503799314 29 16.310324487507728 20.2655645361516 46.198234841093 17.22587613524767 30 16.937745018194008 21.091608932380908 45.37124160474167 16.59940444468341 31 16.90904260450288 22.189337883548852 43.440114746398756 17.461504765549513 32 18.30352130383284 23.37254151570884 41.47071800313433 16.853219177323986 33 17.73002652008141 24.126553132674733 39.86994564727501 18.273474699968848 34 16.419441101540126 24.319404887475468 39.74169409078186 19.519459920202546 35 17.860650176879613 26.24776429546249 36.262060153300936 19.629525374356962 36 18.595605921394924 27.740527017431777 34.66959014850929 18.99427691266401 37 18.48712186744387 26.735072768130358 36.74525698544005 18.032548378985723 38 18.287074741717813 27.63275459357224 34.0414579877315 20.038712676978452 39 18.913309222251566 26.719337836106842 35.21635926882381 19.150993672817787 40 18.48728000746421 26.73649602831339 36.452618877806785 18.323605086415615 41 16.858200587964596 27.675136119022504 34.55304095352107 20.913622339491834 42 18.07706479471053 27.43033536754113 33.614242722791616 20.878357114956724 43 19.3381523868864 26.121726699254054 33.722647706732495 20.817473207127055 44 18.175348817349857 26.62176544355904 33.665480089380736 21.53740564971037 45 18.0573763621786 26.028503157265504 34.154053682211305 21.76006679834459 46 18.431535650295487 26.7309611276016 35.282461797324586 19.555041424778327 47 16.930075227207674 25.55835287680418 37.48717089085017 20.02440100513797 48 17.228801725623903 23.80529168136051 37.35725886414349 21.6086477288721 49 17.881840939604746 23.25899698110701 38.316457157496394 20.542704921791852 50 16.964628821651267 23.15454549767455 38.20670798338265 21.674117697291535 51 16.06568187604669 23.654030751908355 36.72177319242003 23.558514179624922 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 396.0 1 737.0 2 1078.0 3 53366.5 4 105655.0 5 72336.5 6 39018.0 7 36552.0 8 34086.0 9 33266.5 10 32447.0 11 30960.0 12 29473.0 13 27558.0 14 25643.0 15 23317.0 16 20991.0 17 19132.0 18 17273.0 19 15683.0 20 14093.0 21 13094.5 22 12096.0 23 11141.0 24 10186.0 25 10629.5 26 11890.5 27 12708.0 28 13825.5 29 14943.0 30 16037.0 31 17131.0 32 19592.5 33 22054.0 34 23309.0 35 24564.0 36 25763.5 37 26963.0 38 29441.0 39 31919.0 40 36301.5 41 40684.0 42 47209.5 43 53735.0 44 59318.5 45 64902.0 46 73735.0 47 82568.0 48 90325.0 49 98082.0 50 96178.5 51 94275.0 52 81429.0 53 68583.0 54 61347.0 55 54111.0 56 47802.0 57 41493.0 58 40086.0 59 38679.0 60 38418.0 61 38157.0 62 35074.5 63 31992.0 64 26573.0 65 21154.0 66 16821.5 67 12489.0 68 10089.0 69 7689.0 70 6401.5 71 5114.0 72 4134.5 73 3155.0 74 2581.5 75 1516.0 76 1024.0 77 746.0 78 468.0 79 411.0 80 354.0 81 219.0 82 84.0 83 81.5 84 79.0 85 46.5 86 14.0 87 10.5 88 7.0 89 6.5 90 6.0 91 5.0 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1264702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.46007177937985 #Duplication Level Percentage of deduplicated Percentage of total 1 77.14322295420237 25.040745543861124 2 9.904407211398786 6.42995538028424 3 3.797247645366688 3.697767933980515 4 1.8981872516957048 2.464611777629854 5 1.0895861691728577 1.768402263058524 6 0.6810068555354468 1.3263318847758223 7 0.4902518173763251 1.1139526427404856 8 0.3564621903060677 0.9256630627175932 9 0.2895061190966371 0.8457650465801878 >10 3.4875980728216764 29.169359411318084 >50 0.769669057071269 15.840785970614006 >100 0.08565469600796073 4.946779969775364 >500 0.004717215138512345 0.9864225147460154 >1k 0.002234470328769006 1.271630789230178 >5k 0.0 0.0 >10k+ 2.4827448097433397E-4 4.171825808688091 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 51766 4.093138146377566 No Hit GCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 3399 0.26875896456240284 TruSeq Adapter, Index 23 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 3337 0.26385662393196185 TruSeq Adapter, Index 23 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGCT 1875 0.1482562690657562 TruSeq Adapter, Index 20 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 1502 0.11876315527294178 TruSeq Adapter, Index 23 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5814002033680662E-4 0.0 0.0 0.15932607048933267 0.0 2 1.5814002033680662E-4 0.0 0.0 0.9319982098549698 0.0 3 1.5814002033680662E-4 0.0 0.0 1.3437948228120142 0.0 4 1.5814002033680662E-4 0.0 0.0 1.7697449675892027 0.0 5 1.5814002033680662E-4 0.0 0.0 2.8542692270590226 0.0 6 1.5814002033680662E-4 0.0 0.0 3.4159825792953598 0.0 7 1.5814002033680662E-4 0.0 0.0 4.009561145629563 0.0 8 1.5814002033680662E-4 0.0 0.0 4.880201027593852 0.0 9 1.5814002033680662E-4 0.0 0.0 5.173787975349134 0.0 10 1.5814002033680662E-4 0.0 0.0 5.881701776386849 0.0 11 1.5814002033680662E-4 0.0 0.0 6.981012127758159 0.0 12 1.5814002033680662E-4 0.0 0.0 7.8173356253093615 0.0 13 1.5814002033680662E-4 0.0 0.0 8.139466846735436 0.0 14 1.5814002033680662E-4 0.0 0.0 8.268430033320103 0.0 15 1.5814002033680662E-4 0.0 0.0 8.532049447221558 0.0 16 1.5814002033680662E-4 0.0 0.0 9.102618640596758 0.0 17 1.5814002033680662E-4 0.0 0.0 9.774397446987512 0.0 18 1.5814002033680662E-4 0.0 0.0 10.569209189200302 0.0 19 2.3721003050520992E-4 0.0 0.0 11.01492683651959 0.0 20 2.3721003050520992E-4 0.0 0.0 11.467365434703195 0.0 21 2.3721003050520992E-4 0.0 0.0 12.032478797376774 0.0 22 3.1628004067361324E-4 0.0 0.0 12.631750404443101 0.0 23 3.1628004067361324E-4 0.0 0.0 13.240747622760145 0.0 24 3.1628004067361324E-4 0.0 0.0 13.707023472723218 0.0 25 3.9535005084201657E-4 0.0 0.0 14.137164328039333 0.0 26 3.9535005084201657E-4 0.0 0.0 14.536705089420275 0.0 27 3.9535005084201657E-4 0.0 0.0 14.900822486245772 0.0 28 4.7442006101041983E-4 0.0 0.0 15.294274856843746 0.0 29 4.7442006101041983E-4 0.0 0.0 15.67989929643505 0.0 30 4.7442006101041983E-4 0.0 0.0 16.121663443245918 0.0 31 4.7442006101041983E-4 0.0 0.0 16.542394967351992 0.0 32 4.7442006101041983E-4 0.0 0.0 16.943517128936303 0.0 33 4.7442006101041983E-4 0.0 0.0 17.332146228914006 0.0 34 4.7442006101041983E-4 0.0 0.0 17.724966039430633 0.0 35 4.7442006101041983E-4 0.0 0.0 18.149176643984116 0.0 36 4.7442006101041983E-4 0.0 0.0 18.557652316514087 0.0 37 4.7442006101041983E-4 0.0 0.0 18.953555857427283 0.0 38 4.7442006101041983E-4 0.0 0.0 19.335701216571177 0.0 39 4.7442006101041983E-4 0.0 0.0 19.717925645725238 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGGA 30 2.1656742E-6 45.000004 12 GATTACC 30 2.1656742E-6 45.000004 21 GTCGCGA 20 7.0335553E-4 45.0 17 CGAAACG 20 7.0335553E-4 45.0 1 ACCGCGT 20 7.0335553E-4 45.0 16 TTAAGCG 40 6.8157533E-9 45.0 1 CGAATGT 20 7.0335553E-4 45.0 13 ACGCTAG 35 1.2120654E-7 45.0 1 TCGAGTA 20 7.0335553E-4 45.0 39 TTGCACG 35 1.2120654E-7 45.0 1 CGTCCGC 25 3.8910286E-5 45.0 41 TATCGTG 20 7.0335553E-4 45.0 1 TATCGTA 20 7.0335553E-4 45.0 25 AGGTGCG 25 3.8910286E-5 45.0 1 GCGTAAG 70 0.0 45.0 1 ACGACCG 20 7.0335553E-4 45.0 44 CGTTTTT 34515 0.0 44.511078 1 ATGCGCG 100 0.0 42.75 1 ACGGGCC 130 0.0 41.538464 5 TATCGCG 55 6.184564E-11 40.909092 1 >>END_MODULE