##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934934.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 550887 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.70074080528312 34.0 31.0 34.0 31.0 34.0 2 32.84820661950636 34.0 31.0 34.0 31.0 34.0 3 32.894363090797206 34.0 31.0 34.0 31.0 34.0 4 36.27322844793942 37.0 37.0 37.0 35.0 37.0 5 36.16545316916174 37.0 37.0 37.0 35.0 37.0 6 36.172993735557384 37.0 37.0 37.0 35.0 37.0 7 36.264039630632055 37.0 37.0 37.0 35.0 37.0 8 36.262881498383514 37.0 37.0 37.0 35.0 37.0 9 38.02867738755861 39.0 39.0 39.0 37.0 39.0 10 37.68151363165222 39.0 38.0 39.0 35.0 39.0 11 37.53538384459971 39.0 37.0 39.0 35.0 39.0 12 37.385801443853275 39.0 37.0 39.0 35.0 39.0 13 37.28469722465769 39.0 37.0 39.0 34.0 39.0 14 38.61566891213624 40.0 38.0 41.0 35.0 41.0 15 38.69115081677368 40.0 38.0 41.0 35.0 41.0 16 38.79492890556502 40.0 38.0 41.0 35.0 41.0 17 38.796885749709105 40.0 38.0 41.0 35.0 41.0 18 38.31872961242505 39.0 38.0 41.0 35.0 41.0 19 37.80679703823107 38.0 37.0 41.0 35.0 41.0 20 37.21310541000241 38.0 35.0 41.0 34.0 41.0 21 37.15820485870968 38.0 35.0 41.0 34.0 41.0 22 36.9566716949211 38.0 35.0 41.0 34.0 41.0 23 36.868562881316855 37.0 35.0 40.0 33.0 41.0 24 36.677376667084175 37.0 35.0 40.0 33.0 41.0 25 36.51426336072552 37.0 35.0 40.0 33.0 41.0 26 36.5653645847515 37.0 35.0 40.0 33.0 41.0 27 36.593684367211424 37.0 35.0 40.0 33.0 41.0 28 36.51486057939287 37.0 35.0 40.0 33.0 41.0 29 36.34647032876071 37.0 35.0 40.0 33.0 41.0 30 36.043832945776536 37.0 35.0 40.0 32.0 41.0 31 35.48968300214018 37.0 35.0 40.0 30.0 41.0 32 34.70591064955245 37.0 35.0 40.0 22.0 41.0 33 33.74791200373216 37.0 34.0 40.0 15.0 41.0 34 32.94884794885339 37.0 33.0 40.0 10.0 41.0 35 32.451246807421484 36.0 32.0 40.0 10.0 41.0 36 32.219142945830995 36.0 31.0 40.0 8.0 41.0 37 31.96073423406252 36.0 31.0 40.0 8.0 41.0 38 31.846271558413974 36.0 30.0 40.0 7.0 41.0 39 31.748701639356167 36.0 30.0 40.0 7.0 41.0 40 31.584021768529663 36.0 29.0 40.0 7.0 41.0 41 31.431219106640746 36.0 29.0 40.0 7.0 41.0 42 31.292985675828255 36.0 27.0 40.0 7.0 41.0 43 31.191747127813873 35.0 27.0 40.0 7.0 41.0 44 31.100688525959043 35.0 26.0 40.0 7.0 41.0 45 31.01637540911294 35.0 25.0 40.0 7.0 41.0 46 30.977469063528456 35.0 25.0 40.0 7.0 41.0 47 30.942853979128206 35.0 25.0 40.0 7.0 41.0 48 30.88007340888422 35.0 25.0 40.0 7.0 41.0 49 30.75400944295291 35.0 24.0 40.0 7.0 41.0 50 30.66283466482237 35.0 24.0 40.0 7.0 41.0 51 30.150139683819006 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 2.0 10 1.0 11 4.0 12 9.0 13 17.0 14 16.0 15 30.0 16 66.0 17 120.0 18 247.0 19 454.0 20 764.0 21 1200.0 22 2000.0 23 3304.0 24 6150.0 25 12584.0 26 22864.0 27 28713.0 28 27152.0 29 20886.0 30 15875.0 31 13460.0 32 13324.0 33 16225.0 34 30927.0 35 46198.0 36 35733.0 37 45292.0 38 82874.0 39 124304.0 40 87.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.747843024068455 15.18369465970335 17.587272888995383 37.481189427232806 2 50.660480279984824 17.982453751858365 18.4175702094985 12.939495758658309 3 23.80633414838252 18.432273769393724 45.28750905358086 12.473883028642897 4 21.40547880055256 19.249501258878862 45.59664686224217 13.74837307832641 5 19.40525007850975 21.962035771401396 44.38078952670874 14.251924623380113 6 20.986699631684903 25.1042409786399 42.66628183275336 11.242777556921837 7 60.518037274431954 4.393460001778949 31.92923412605489 3.1592685977341994 8 61.569614095086656 4.153483382254437 31.32166850914979 2.9552340135091226 9 57.58113732943416 5.65651394932173 32.35418515956993 4.408163561674173 10 33.98755098595538 18.57495275800663 37.34341162525164 10.09408463078635 11 27.1108230907609 17.551149328265144 41.903148921648175 13.434878659325777 12 24.57255299181139 16.50265843993414 44.91683412387658 14.007954444377885 13 18.438627159471906 19.84762755338209 46.33454773846542 15.379197548680581 14 15.224356356203723 22.787976481565185 45.59773601482699 16.389931147404095 15 14.83752566315778 18.48600529691207 51.66122998001404 15.0152390599161 16 16.280652838059346 16.894934895904242 51.423068614797586 15.401343651238818 17 15.754229088724184 17.177025415375567 46.91960420195067 20.149141293949576 18 18.012950024233646 18.230962066630724 46.92450538858242 16.83158252055322 19 19.15528956029095 19.547747541691855 45.15318023478499 16.143782663232205 20 21.545253382272588 18.03382544877625 45.455601602506505 14.96531956644466 21 19.549199745138296 18.649196659205973 44.73821309996424 17.063390495691493 22 18.672068863487432 18.2231564731061 44.839685815784364 18.265088847622106 23 17.9385245976035 19.87322263912563 44.840774968369196 17.34747779490168 24 17.67023001087337 17.710528656512135 47.505386767159145 17.113854565455348 25 17.0635720211223 19.23897278389216 46.37484638410418 17.32260881088136 26 16.085512999943727 22.0802088268556 45.68650195049075 16.14777622270992 27 16.90328506572128 21.13010472202103 45.477203128772324 16.48940708348536 28 15.62770586345294 20.570643344279315 47.259238282987255 16.54241250928049 29 16.41298487711636 19.51543601500852 46.99493725573484 17.076641852140277 30 17.230393892032303 20.642527414878188 44.82171479813464 17.305363894954866 31 18.623601573462434 22.02193916356712 41.64865026765925 17.705808995311198 32 19.82838585771674 22.935193605948225 39.97262596503457 17.263794571300465 33 19.571708898558143 24.056294666601318 38.10618148549521 18.26581494934533 34 17.935983241572227 24.747906557969237 37.54726468404591 19.768845516412622 35 18.77208937586111 26.26836356639383 35.32702713986716 19.632519917877893 36 20.293817062301343 27.287810385795996 34.00007624068094 18.41829631122172 37 20.246257399430373 27.730369386099145 34.59965473863061 17.423718475839873 38 19.305411091566874 27.2324451294004 33.049427559553955 20.412716219478767 39 19.76013229573397 27.693156672784074 33.561510799855505 18.98520023162645 40 19.975239931238168 27.006445968047892 33.94344030626971 19.074873794444233 41 17.751916454735724 27.408887848143088 33.35239350356788 21.486802193553306 42 19.13586633919479 27.450275646366677 31.870419886473993 21.54343812796454 43 20.075623494473458 27.469154291170423 31.377578341837797 21.07764387251832 44 19.653032291558887 27.84037379716711 31.668926658280196 20.837667252993807 45 18.230962066630724 27.734181420146054 32.352551430692685 21.682305082530537 46 19.557549914955334 27.724197521451764 33.162880953807225 19.555371609785674 47 18.865393447295 26.2707233969943 35.26748679856305 19.596396357147654 48 19.311582956214252 24.04050195412126 35.107925944885245 21.539989144779238 49 17.697095774632547 24.74445757478394 36.564667527097214 20.993779123486306 50 17.728681199592657 25.047968095090283 36.205065648672054 21.018285056645013 51 17.368897795736693 25.995167793031964 33.732326230243224 22.903608180988115 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 109.0 1 302.0 2 495.0 3 19494.0 4 38493.0 5 27581.0 6 16669.0 7 16326.0 8 15983.0 9 15513.0 10 15043.0 11 14507.0 12 13971.0 13 12967.0 14 11963.0 15 10855.5 16 9748.0 17 9006.0 18 8264.0 19 7570.0 20 6876.0 21 6286.5 22 5697.0 23 5394.0 24 5091.0 25 4818.0 26 4685.0 27 4825.0 28 5120.0 29 5415.0 30 5477.0 31 5539.0 32 7177.0 33 8815.0 34 9028.5 35 9242.0 36 10510.5 37 11779.0 38 12982.0 39 14185.0 40 16437.0 41 18689.0 42 20907.0 43 23125.0 44 25377.5 45 27630.0 46 29812.5 47 31995.0 48 32428.5 49 32862.0 50 32568.5 51 32275.0 52 29704.5 53 27134.0 54 25134.5 55 23135.0 56 22818.5 57 22502.0 58 22358.0 59 22214.0 60 21761.5 61 21309.0 62 20218.0 63 19127.0 64 15751.5 65 12376.0 66 10028.0 67 7680.0 68 6578.0 69 5476.0 70 4794.0 71 4112.0 72 3341.5 73 2571.0 74 2283.0 75 1564.0 76 1133.0 77 793.0 78 453.0 79 289.0 80 125.0 81 124.5 82 124.0 83 102.0 84 80.0 85 44.5 86 9.0 87 7.0 88 5.0 89 3.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 550887.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.66009019947473 #Duplication Level Percentage of deduplicated Percentage of total 1 81.68669899861199 27.495816563906217 2 7.268342660555678 4.893061391099886 3 2.4398264794692577 2.4637433811000626 4 1.138398480550714 1.5327438215312803 5 0.6920787222896843 1.1647716108703998 6 0.47861695968187384 0.9666174020334141 7 0.37164540641728805 0.8756732531558453 8 0.30834733248609525 0.8303199219399513 9 0.2716606515634056 0.8229709831745078 >10 4.703470682350801 40.565899805216986 >50 0.6045731626919778 12.335836040731282 >100 0.03413801100810801 2.243688022793204 >500 0.0016518392423278071 0.360850865717691 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 5.506130807759357E-4 3.448006936729288 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18604 3.3770991147004743 No Hit GCTGTCTCTTATACACATCTGACGCAGCAGAACTCGTATGCCGTCTTCTGC 767 0.13923000542761038 Illumina PCR Primer Index 9 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCAGCAGAACTCGTATGCCGTCTTCTGC 609 0.11054898736038425 Illumina PCR Primer Index 9 (95% over 24bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCAGAACTCGTATGC 571 0.10365102098978557 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8152543080522866E-4 0.0 0.0 0.08150491843154767 0.0 2 1.8152543080522866E-4 0.0 0.0 0.4650681537229958 0.0 3 1.8152543080522866E-4 0.0 0.0 0.6745485008722297 0.0 4 1.8152543080522866E-4 0.0 0.0 0.8876593566375681 0.0 5 1.8152543080522866E-4 0.0 0.0 1.490142261480122 0.0 6 1.8152543080522866E-4 0.0 0.0 1.775863289567552 0.0 7 1.8152543080522866E-4 0.0 0.0 2.084819572798051 0.0 8 1.8152543080522866E-4 0.0 0.0 2.5224773864694576 0.0 9 1.8152543080522866E-4 0.0 0.0 2.6709651888681343 0.0 10 1.8152543080522866E-4 0.0 0.0 3.0935563917827067 0.0 11 1.8152543080522866E-4 0.0 0.0 3.637769633336782 0.0 12 1.8152543080522866E-4 0.0 0.0 4.157476941732152 0.0 13 1.8152543080522866E-4 0.0 0.0 4.33065220272034 0.0 14 1.8152543080522866E-4 0.0 0.0 4.411067968567056 0.0 15 1.8152543080522866E-4 0.0 0.0 4.559192720104123 0.0 16 1.8152543080522866E-4 0.0 0.0 4.848907307669268 0.0 17 1.8152543080522866E-4 0.0 0.0 5.194350202491618 0.0 18 1.8152543080522866E-4 0.0 0.0 5.565569708488311 0.0 19 1.8152543080522866E-4 0.0 0.0 5.81897920989241 0.0 20 1.8152543080522866E-4 0.0 0.0 6.0340868453966054 0.0 21 1.8152543080522866E-4 0.0 0.0 6.295846516617746 0.0 22 1.8152543080522866E-4 0.0 0.0 6.602442969247777 0.0 23 1.8152543080522866E-4 0.0 0.0 6.899418574045131 0.0 24 1.8152543080522866E-4 0.0 0.0 7.14937909226393 0.0 25 1.8152543080522866E-4 0.0 0.0 7.3530506256273975 0.0 26 1.8152543080522866E-4 0.0 0.0 7.548735040035433 0.0 27 1.8152543080522866E-4 0.0 0.0 7.728082165670999 0.0 28 1.8152543080522866E-4 0.0 0.0 7.92703403783353 0.0 29 1.8152543080522866E-4 0.0 0.0 8.131976249212633 0.0 30 1.8152543080522866E-4 0.0 0.0 8.357612359703532 0.0 31 3.630508616104573E-4 0.0 0.0 8.595410674058382 0.0 32 3.630508616104573E-4 0.0 0.0 8.813785767317071 0.0 33 3.630508616104573E-4 0.0 0.0 9.016549673526512 0.0 34 3.630508616104573E-4 0.0 0.0 9.23801069910889 0.0 35 3.630508616104573E-4 0.0 0.0 9.470363250539584 0.0 36 3.630508616104573E-4 0.0 0.0 9.700174445939004 0.0 37 3.630508616104573E-4 0.0 0.0 9.925265980137487 0.0 38 3.630508616104573E-4 0.0 0.0 10.161612091045894 0.0 39 3.630508616104573E-4 0.0 0.0 10.379261082581364 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGACTT 20 7.0300826E-4 45.000004 44 CGTGAGT 25 3.8881506E-5 45.000004 32 TAGCGTA 25 3.8881506E-5 45.000004 1 CATTGCG 20 7.0300826E-4 45.000004 1 CGTGAAC 25 3.8881506E-5 45.000004 34 TAGCGCG 25 3.8881506E-5 45.000004 1 GCACGTT 20 7.0300826E-4 45.000004 34 ATCGTGA 25 3.8881506E-5 45.000004 30 TCGTGAT 20 7.0300826E-4 45.000004 44 TCTACGA 20 7.0300826E-4 45.000004 15 CGAATAT 40 6.8048394E-9 45.000004 14 CATACCA 25 3.8881506E-5 45.000004 15 TCCGTGA 20 7.0300826E-4 45.000004 36 ACGCTAG 20 7.0300826E-4 45.000004 1 ATGCGTG 20 7.0300826E-4 45.000004 12 CTCGAAT 20 7.0300826E-4 45.000004 43 ACGTATG 20 7.0300826E-4 45.000004 1 CGGTCGA 20 7.0300826E-4 45.000004 13 GCTACGA 40 6.8048394E-9 45.000004 10 ACATACC 25 3.8881506E-5 45.000004 14 >>END_MODULE