SRR2934932.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934932.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1391824
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	58788	4.223809906999736	No Hit
CCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC	3067	0.2203583211670441	No Hit
GCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC	3016	0.21669406476680958	No Hit
CTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGCT	1690	0.12142339836071227	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	1550	0.111364655301245	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTAG	40	6.8175723E-9	45.0	1
TAGCCGA	25	3.8912316E-5	45.0	45
TACGATC	20	7.0338004E-4	45.0	12
CCAACGA	20	7.0338004E-4	45.0	9
TCGAAGT	20	7.0338004E-4	45.0	11
TCGAACG	35	1.2121745E-7	45.0	1
TACGTCG	20	7.0338004E-4	45.0	24
CGTTTTT	39690	0.0	44.53515	1
TAGAACG	50	1.0822987E-9	40.5	1
GTTTTTT	43960	0.0	40.378185	2
ACGTTAG	80	0.0	39.375	1
CGGTCTA	40	3.4589175E-7	39.375	31
ACGGTCT	40	3.4589175E-7	39.375	30
TACGCGG	70	0.0	38.571426	2
GCGATAT	70	0.0	38.571426	9
TAATCGG	35	6.24924E-6	38.571426	1
AACGTCG	30	1.14004564E-4	37.499996	44
GATCGAT	30	1.14004564E-4	37.499996	9
ATATCGA	30	1.14004564E-4	37.499996	19
CGGATAC	30	1.14004564E-4	37.499996	14