SRR2934931.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934931.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1495724
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	56225	3.759049129384833	No Hit
GCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC	2860	0.19121174762188745	No Hit
CCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC	2204	0.1473533887267972	No Hit
CGCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTG	1728	0.11552933562609144	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	1723	0.11519504935402522	No Hit
CTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGCT	1594	0.10657046353471629	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTACCG	30	2.1659416E-6	45.000004	1
AAGCGCG	35	1.2122655E-7	45.000004	1
ACTACGG	30	2.1659416E-6	45.000004	2
AGCGTGC	20	7.0339703E-4	45.0	12
CCTACGC	20	7.0339703E-4	45.0	28
CACTACG	20	7.0339703E-4	45.0	1
TCGTAGC	20	7.0339703E-4	45.0	18
ACGGTAC	20	7.0339703E-4	45.0	15
TCGTAAG	65	0.0	44.999996	1
CGTTTTT	44420	0.0	44.554256	1
ACCGGGT	90	0.0	40.0	4
CCGACGT	45	1.9290383E-8	40.0	12
GTTTTTT	50440	0.0	39.39284	2
ACGCGAG	40	3.459154E-7	39.375	1
CGATCAT	35	6.249551E-6	38.57143	10
ACCTCGT	30	1.1400861E-4	37.500004	38
TAGATCG	30	1.1400861E-4	37.500004	1
CGGTAAT	30	1.1400861E-4	37.500004	15
TCGACGG	60	1.5643309E-10	37.500004	2
ATCGACG	30	1.1400861E-4	37.500004	1