SRR2934928.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934928.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	441451
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14636	3.315430251602103	No Hit
GCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC	2041	0.4623389685378445	No Hit
CCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC	1830	0.41454204430389785	No Hit
CTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGCT	994	0.22516655302627017	No Hit
TCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC	798	0.18076751440137184	No Hit
CGCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTG	651	0.1474682354326981	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCC	549	0.12436261329116935	No Hit
ACTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC	528	0.11960557343850167	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTAT	20	7.0285593E-4	45.000004	6
AACCGCA	20	7.0285593E-4	45.000004	24
CCGGGTG	20	7.0285593E-4	45.000004	5
CGTGCAG	20	7.0285593E-4	45.000004	38
TTAGCAC	20	7.0285593E-4	45.000004	14
TAGGTCG	20	7.0285593E-4	45.000004	1
TAGCGTC	20	7.0285593E-4	45.000004	14
CGGCACA	20	7.0285593E-4	45.000004	45
GTTAGCG	20	7.0285593E-4	45.000004	1
GATCAGA	20	7.0285593E-4	45.000004	9
CGCGATT	20	7.0285593E-4	45.000004	12
ATCACGT	20	7.0285593E-4	45.000004	16
TCCTACT	20	7.0285593E-4	45.000004	11
TATGAGT	20	7.0285593E-4	45.000004	21
GGCCATA	20	7.0285593E-4	45.000004	14
CCATAGG	20	7.0285593E-4	45.000004	2
AGCGATG	20	7.0285593E-4	45.000004	1
ATGACTC	20	7.0285593E-4	45.000004	45
GCGATAT	40	6.7993824E-9	45.000004	9
TCGTAGG	20	7.0285593E-4	45.000004	2