##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934928.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 441451 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.48129237446511 34.0 31.0 34.0 31.0 34.0 2 32.64993170249926 34.0 31.0 34.0 31.0 34.0 3 32.7094037616859 34.0 31.0 34.0 31.0 34.0 4 36.13173149454866 37.0 37.0 37.0 35.0 37.0 5 36.00999204894767 37.0 35.0 37.0 35.0 37.0 6 35.98770871512354 37.0 35.0 37.0 35.0 37.0 7 36.16181637373117 37.0 36.0 37.0 35.0 37.0 8 36.17951709249724 37.0 37.0 37.0 35.0 37.0 9 37.97719339179207 39.0 39.0 39.0 35.0 39.0 10 37.54155047785598 39.0 37.0 39.0 35.0 39.0 11 37.39491359176896 39.0 37.0 39.0 34.0 39.0 12 37.242622624028485 39.0 37.0 39.0 34.0 39.0 13 37.08652828966295 39.0 37.0 39.0 33.0 39.0 14 38.30735234488086 40.0 37.0 41.0 33.0 41.0 15 38.39473916697436 40.0 37.0 41.0 34.0 41.0 16 38.536779846460874 40.0 38.0 41.0 34.0 41.0 17 38.561704470031785 40.0 38.0 41.0 34.0 41.0 18 38.08022181397256 39.0 37.0 40.0 34.0 41.0 19 37.5816659153564 37.0 37.0 40.0 34.0 41.0 20 37.00116660739244 37.0 35.0 40.0 34.0 41.0 21 36.92830914416322 37.0 35.0 40.0 34.0 41.0 22 36.75243685029596 37.0 35.0 40.0 33.0 41.0 23 36.643154053337746 37.0 35.0 40.0 33.0 41.0 24 36.44251117338051 36.0 35.0 40.0 33.0 41.0 25 36.308709233867404 36.0 35.0 40.0 33.0 41.0 26 36.44354639586273 36.0 35.0 40.0 33.0 41.0 27 36.48399709140992 36.0 35.0 40.0 33.0 41.0 28 36.41749140901255 36.0 35.0 40.0 33.0 41.0 29 36.30466801524971 37.0 35.0 40.0 33.0 41.0 30 36.009885581865255 37.0 35.0 40.0 32.0 41.0 31 35.381394537559096 36.0 35.0 40.0 30.0 41.0 32 34.60570935392603 36.0 35.0 40.0 22.0 41.0 33 33.618929394202304 37.0 34.0 40.0 15.0 41.0 34 32.75861647159028 36.0 33.0 40.0 10.0 41.0 35 32.34093478098362 37.0 32.0 40.0 8.0 41.0 36 32.15206444203321 36.0 31.0 40.0 8.0 41.0 37 31.928499425757334 36.0 31.0 40.0 8.0 41.0 38 31.845423387873172 36.0 30.0 40.0 8.0 41.0 39 31.814117535128474 36.0 30.0 40.0 7.0 41.0 40 31.678054869056815 36.0 30.0 40.0 7.0 41.0 41 31.53866227508829 36.0 29.0 40.0 7.0 41.0 42 31.385270392410483 36.0 29.0 40.0 7.0 41.0 43 31.22559468661301 35.0 27.0 40.0 7.0 41.0 44 31.103051074751217 35.0 26.0 40.0 7.0 41.0 45 31.073052275337467 35.0 26.0 40.0 7.0 41.0 46 31.014642621717925 35.0 26.0 40.0 7.0 41.0 47 30.943182822102568 35.0 26.0 40.0 7.0 41.0 48 30.89288505406036 35.0 26.0 40.0 7.0 41.0 49 30.76058271472938 35.0 25.0 40.0 7.0 41.0 50 30.64016164874471 35.0 24.0 40.0 7.0 41.0 51 30.049677087604287 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 3.0 11 3.0 12 4.0 13 5.0 14 9.0 15 12.0 16 34.0 17 93.0 18 191.0 19 351.0 20 602.0 21 911.0 22 1497.0 23 2708.0 24 5260.0 25 11339.0 26 19715.0 27 23215.0 28 20068.0 29 15254.0 30 11801.0 31 10780.0 32 11311.0 33 14309.0 34 26703.0 35 39618.0 36 30594.0 37 39269.0 38 71377.0 39 84359.0 40 54.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.721758473760396 16.375090327125776 18.590964795639835 35.312186403474 2 50.98346135811222 18.35356585442099 17.96620689498948 12.696765892477307 3 22.929611666980026 18.988743937605758 45.00612752038165 13.075516875032564 4 20.93301408310322 19.909117886243322 45.501765767888166 13.656102262765291 5 19.721554600623854 21.710903361868024 44.37751868270771 14.190023354800418 6 19.72925647467103 24.909672874226132 44.111124450958314 11.249946200144523 7 58.056500041907256 4.8213731535323285 32.87703505032268 4.2450917542377296 8 58.49256202840179 4.089695119050585 32.474045817089554 4.943697035458069 9 54.789546291660905 5.266269642610392 34.20107780931519 5.743106256413509 10 32.0554263100548 17.559366724732755 39.30311631415491 11.082090651057536 11 25.73490602581034 18.10031011369325 42.188827299066034 13.975956561430374 12 23.664008009949008 16.166233625022937 46.26198604148592 13.907772323542137 13 17.300674367030542 22.03574122609304 46.567116169178455 14.096468237697954 14 14.043008170782262 25.347320540671557 45.68729032214221 14.922380966403972 15 12.151745040785954 19.93177045697031 54.571628561267275 13.34485594097646 16 13.860201925015462 18.766069167359458 51.3493003753531 16.024428532271983 17 14.717828252739263 17.744211701864987 45.95073971969709 21.58722032569866 18 16.291275815435917 19.144367098500172 48.72500005663143 15.839357029432485 19 18.543620922820423 20.15014123877848 45.45057095804517 15.855666880355917 20 19.716571035063915 19.525156812420857 46.13286638834208 14.625405764173147 21 16.38528398395292 21.201673571925312 46.47401410349053 15.939028340631237 22 14.894971355824316 20.461614086274583 45.054604021737404 19.5888105361637 23 14.215394234014648 21.867659151298785 45.534838521149574 18.382108093536996 24 16.432854382479594 18.699017558007572 47.67097594070463 17.197152118808205 25 14.030322731175145 20.227839556372054 46.77008320289228 18.97175450956052 26 13.895766461056832 22.586198694758874 45.64198518068823 17.87604966349606 27 16.60456086859017 21.993607444540846 45.469146066041304 15.93268562082768 28 12.976525140955623 21.6132707820347 48.27330779633527 17.136896280674414 29 14.107114945939639 19.426844655465725 48.170238599527465 18.295801799067167 30 16.579869566497756 20.799363915813988 45.838382968891224 16.782383548797036 31 17.065540682884397 24.24278119202358 41.42271735707927 17.268960768012757 32 17.639783350813566 23.25082511988873 40.93772581781444 18.171665711483268 33 19.12828377328401 23.136429637717438 39.767720539765456 17.967566049233096 34 15.702762027948742 25.01681953376479 38.75084663983092 20.52957179845555 35 16.559935304258 23.142545831813724 36.90103771426501 23.39648114966327 36 20.492648108170556 25.31832525014101 35.1647181680413 19.02430847364713 37 18.39366090460776 28.040258148696008 36.406985146709374 17.15909579998686 38 17.374748273307798 28.045921291377752 34.411067139954376 20.168263295360074 39 18.670022267477023 25.415504778559793 36.988929688685715 18.92554326527746 40 19.626187277863227 23.849759089910318 36.38478562739692 20.13926800482953 41 17.719067348358028 25.098368788381947 33.29882591725922 23.883737946000803 42 20.58393796820032 24.418338615157744 32.91350568919314 22.0842177274488 43 21.094073860972113 24.640786859696775 33.308113471257286 20.95702580807383 44 17.787025060538994 25.751668928148312 34.28874325802864 22.172562753284055 45 16.963604114612945 26.027577239603033 33.43927185576655 23.569546790017466 46 19.251740283746102 25.1792384658773 34.55264570699806 21.01637554337854 47 16.651678215702308 25.745099682637484 36.01169778752342 21.59152431413679 48 18.14697440939085 22.316633103107705 36.037521718152185 23.49887076934926 49 17.94083601577525 21.53376025878297 38.48196062530157 22.04344310014022 50 17.068712042786174 22.8199732246614 37.02879821316522 23.0825165193872 51 16.196135018382563 22.769004940525676 34.175480404393696 26.859379636698073 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 324.0 1 354.0 2 384.0 3 13695.5 4 27007.0 5 18712.5 6 10418.0 7 10679.0 8 10940.0 9 11324.5 10 11709.0 11 11548.5 12 11388.0 13 10836.0 14 10284.0 15 9591.5 16 8899.0 17 8161.0 18 7423.0 19 6745.0 20 6067.0 21 5555.5 22 5044.0 23 4626.0 24 4208.0 25 3848.5 26 3683.0 27 3877.0 28 3991.0 29 4105.0 30 4678.0 31 5251.0 32 6109.0 33 6967.0 34 7046.5 35 7126.0 36 8086.0 37 9046.0 38 9750.0 39 10454.0 40 12242.5 41 14031.0 42 17940.5 43 21850.0 44 24922.0 45 27994.0 46 31257.0 47 34520.0 48 37142.5 49 39765.0 50 39754.5 51 39744.0 52 32661.5 53 25579.0 54 21633.0 55 17687.0 56 15655.0 57 13623.0 58 12532.5 59 11442.0 60 10886.5 61 10331.0 62 8909.5 63 7488.0 64 6312.5 65 5137.0 66 4139.0 67 3141.0 68 2522.0 69 1903.0 70 1625.5 71 1348.0 72 968.5 73 589.0 74 431.5 75 304.0 76 334.0 77 200.5 78 67.0 79 78.5 80 90.0 81 89.0 82 88.0 83 48.5 84 9.0 85 6.0 86 3.0 87 2.5 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 441451.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.53421371526672 #Duplication Level Percentage of deduplicated Percentage of total 1 78.20116889347219 30.134205549247252 2 9.808677779504043 7.5593937163919325 3 3.7581508344870285 4.344521622909935 4 1.8261394884671724 2.814753972899275 5 1.0560019622906682 2.034610264932482 6 0.6192792355505506 1.4318063047279153 7 0.4467829427021742 1.2051500578894945 8 0.32463998601833305 1.0007797281401318 9 0.2734175010621889 0.9482335577482098 >10 3.251134807400506 31.404635297660665 >50 0.3875092865285834 9.218323645984828 >100 0.042327937451583725 2.8433521510791793 >500 0.0029808406656044876 0.8086450328673112 >1k 0.001192336266241795 0.8892798074515231 >5k 0.0 0.0 >10k+ 5.961681331208976E-4 3.3623092900698768 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14636 3.315430251602103 No Hit GCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 2041 0.4623389685378445 No Hit CCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 1830 0.41454204430389785 No Hit CTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGCT 994 0.22516655302627017 No Hit TCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 798 0.18076751440137184 No Hit CGCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTG 651 0.1474682354326981 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCC 549 0.12436261329116935 No Hit ACTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 528 0.11960557343850167 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.2652570726988954E-4 0.0 0.0 0.24283555819332156 0.0 2 2.2652570726988954E-4 0.0 0.0 1.515230455928291 0.0 3 2.2652570726988954E-4 0.0 0.0 2.1707958527673514 0.0 4 2.2652570726988954E-4 0.0 0.0 2.8261347238991417 0.0 5 2.2652570726988954E-4 0.0 0.0 4.542066956468555 0.0 6 2.2652570726988954E-4 0.0 0.0 5.379079444830797 0.0 7 2.2652570726988954E-4 0.0 0.0 6.309647050295503 0.0 8 2.2652570726988954E-4 0.0 0.0 7.703006675712594 0.0 9 2.2652570726988954E-4 0.0 0.0 8.207479425802637 0.0 10 2.2652570726988954E-4 0.0 0.0 9.301825117623473 0.0 11 2.2652570726988954E-4 0.0 0.0 10.853979263836756 0.0 12 2.2652570726988954E-4 0.0 0.0 12.109158207819215 0.0 13 2.2652570726988954E-4 0.0 0.0 12.608420866642051 0.0 14 2.2652570726988954E-4 0.0 0.0 12.785110918312565 0.0 15 2.2652570726988954E-4 0.0 0.0 13.118556759413842 0.0 16 2.2652570726988954E-4 0.0 0.0 13.900750026616771 0.0 17 2.2652570726988954E-4 0.0 0.0 14.856688511295705 0.0 18 2.2652570726988954E-4 0.0 0.0 16.088308781722095 0.0 19 2.2652570726988954E-4 0.0 0.0 16.69449157437632 0.0 20 2.2652570726988954E-4 0.0 0.0 17.273264756450885 0.0 21 2.2652570726988954E-4 0.0 0.0 17.98568810581469 0.0 22 2.2652570726988954E-4 0.0 0.0 18.69561967239852 0.0 23 2.2652570726988954E-4 0.0 0.0 19.433640426683823 0.0 24 2.2652570726988954E-4 0.0 0.0 19.963484055988094 0.0 25 2.2652570726988954E-4 0.0 0.0 20.455044840763755 0.0 26 2.2652570726988954E-4 0.0 0.0 20.91693075788706 0.0 27 2.2652570726988954E-4 0.0 0.0 21.359788515599693 0.0 28 2.2652570726988954E-4 0.0 0.0 21.81850307282122 0.0 29 2.2652570726988954E-4 0.0 0.0 22.262493459070203 0.0 30 2.2652570726988954E-4 0.0 0.0 22.791430985545393 0.0 31 2.2652570726988954E-4 0.0 0.0 23.29635678704998 0.0 32 2.2652570726988954E-4 0.0 0.0 23.757563127051473 0.0 33 2.2652570726988954E-4 0.0 0.0 24.21718378710208 0.0 34 2.2652570726988954E-4 0.0 0.0 24.650300939402108 0.0 35 4.530514145397791E-4 0.0 0.0 25.125098821839796 0.0 36 4.530514145397791E-4 0.0 0.0 25.600123229984757 0.0 37 4.530514145397791E-4 0.0 0.0 26.028936393846656 0.0 38 4.530514145397791E-4 0.0 0.0 26.442798861028745 0.0 39 6.795771218096686E-4 0.0 0.0 26.88135263030325 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 20 7.0285593E-4 45.000004 6 AACCGCA 20 7.0285593E-4 45.000004 24 CCGGGTG 20 7.0285593E-4 45.000004 5 CGTGCAG 20 7.0285593E-4 45.000004 38 TTAGCAC 20 7.0285593E-4 45.000004 14 TAGGTCG 20 7.0285593E-4 45.000004 1 TAGCGTC 20 7.0285593E-4 45.000004 14 CGGCACA 20 7.0285593E-4 45.000004 45 GTTAGCG 20 7.0285593E-4 45.000004 1 GATCAGA 20 7.0285593E-4 45.000004 9 CGCGATT 20 7.0285593E-4 45.000004 12 ATCACGT 20 7.0285593E-4 45.000004 16 TCCTACT 20 7.0285593E-4 45.000004 11 TATGAGT 20 7.0285593E-4 45.000004 21 GGCCATA 20 7.0285593E-4 45.000004 14 CCATAGG 20 7.0285593E-4 45.000004 2 AGCGATG 20 7.0285593E-4 45.000004 1 ATGACTC 20 7.0285593E-4 45.000004 45 GCGATAT 40 6.7993824E-9 45.000004 9 TCGTAGG 20 7.0285593E-4 45.000004 2 >>END_MODULE