##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934926.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1720062 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.653827013212315 34.0 31.0 34.0 31.0 34.0 2 32.80292977811265 34.0 31.0 34.0 31.0 34.0 3 32.85014028564087 34.0 31.0 34.0 31.0 34.0 4 36.23690832074658 37.0 37.0 37.0 35.0 37.0 5 36.13432306509882 37.0 37.0 37.0 35.0 37.0 6 36.12373216779395 37.0 36.0 37.0 35.0 37.0 7 36.24807129045348 37.0 37.0 37.0 35.0 37.0 8 36.224843057982795 37.0 37.0 37.0 35.0 37.0 9 37.99626815777571 39.0 39.0 39.0 35.0 39.0 10 37.639743799932795 39.0 38.0 39.0 35.0 39.0 11 37.53515163988275 39.0 37.0 39.0 35.0 39.0 12 37.47641538502682 39.0 37.0 39.0 35.0 39.0 13 37.456855043597265 39.0 37.0 39.0 35.0 39.0 14 38.77190531504097 40.0 38.0 41.0 35.0 41.0 15 38.785215881753096 40.0 38.0 41.0 35.0 41.0 16 38.871460447355965 40.0 38.0 41.0 35.0 41.0 17 38.854237230983536 40.0 38.0 41.0 35.0 41.0 18 38.34572242163364 39.0 38.0 41.0 35.0 41.0 19 37.83935753478654 38.0 37.0 41.0 35.0 41.0 20 37.25063747702118 38.0 35.0 41.0 34.0 41.0 21 37.221129819739055 38.0 35.0 41.0 34.0 41.0 22 37.03219244422585 38.0 35.0 41.0 34.0 41.0 23 36.91094390783588 38.0 35.0 40.0 33.0 41.0 24 36.724054132932416 37.0 35.0 40.0 33.0 41.0 25 36.59317338561052 37.0 35.0 40.0 33.0 41.0 26 36.69646036014981 37.0 35.0 40.0 33.0 41.0 27 36.72123156025771 38.0 35.0 40.0 33.0 41.0 28 36.62301824004018 38.0 35.0 40.0 33.0 41.0 29 36.481301255419865 38.0 35.0 40.0 33.0 41.0 30 36.173645484872054 38.0 35.0 40.0 32.0 41.0 31 35.66154185139838 38.0 35.0 40.0 30.0 41.0 32 34.88148392325393 38.0 35.0 40.0 22.0 41.0 33 33.89758508704919 38.0 34.0 40.0 16.0 41.0 34 33.083528384441955 38.0 33.0 41.0 10.0 41.0 35 32.57516705793163 38.0 32.0 41.0 10.0 41.0 36 32.323068005688164 38.0 31.0 41.0 8.0 41.0 37 32.07491125319901 37.0 31.0 41.0 8.0 41.0 38 31.915153058436264 37.0 30.0 40.0 7.0 41.0 39 31.84841883606521 37.0 29.0 40.0 7.0 41.0 40 31.726506370119218 37.0 29.0 40.0 7.0 41.0 41 31.619577666386444 37.0 29.0 40.0 7.0 41.0 42 31.48433021600384 37.0 27.0 40.0 7.0 41.0 43 31.37298829925898 37.0 27.0 40.0 7.0 41.0 44 31.275748199774196 36.0 25.0 40.0 7.0 41.0 45 31.244795827127163 36.0 25.0 40.0 7.0 41.0 46 31.197974259067404 36.0 25.0 40.0 7.0 41.0 47 31.180443495641438 36.0 25.0 40.0 7.0 41.0 48 31.12013113480793 35.0 25.0 40.0 7.0 41.0 49 30.99544667575936 35.0 24.0 40.0 7.0 41.0 50 30.898308898167624 35.0 24.0 40.0 7.0 41.0 51 30.363060168761358 35.0 24.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 14.0 10 16.0 11 22.0 12 30.0 13 45.0 14 55.0 15 109.0 16 179.0 17 319.0 18 715.0 19 1290.0 20 2297.0 21 3786.0 22 5959.0 23 10032.0 24 18415.0 25 38945.0 26 70448.0 27 89340.0 28 82871.0 29 66054.0 30 51323.0 31 45034.0 32 42530.0 33 49440.0 34 87894.0 35 109818.0 36 113438.0 37 148233.0 38 277655.0 39 403479.0 40 270.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.817726337771546 14.969518540610746 17.51599651640464 36.69675860521307 2 50.94764025947902 19.192389576654794 17.369664581858096 12.49030558200809 3 23.223988437626087 18.981118122486283 45.47336084396958 12.321532595918054 4 20.96854648262679 18.605724677366283 47.0923722516979 13.333356588309025 5 20.165668446835056 21.588465997155918 43.85940739345442 14.386458162554606 6 20.113344751526398 25.675586112593617 43.436806347678164 10.77426278820182 7 58.18941410251492 4.705469919107567 33.68413464165826 3.420981336719258 8 58.90828353861664 5.478581586012597 32.15727107511241 3.455863800258363 9 54.098980153041 5.967924412027008 33.804072178793554 6.129023256138442 10 31.325673144340143 18.789671535095827 38.79528761172563 11.089367708838402 11 24.78712976625261 18.01121122378147 43.14210766821196 14.05955134175396 12 21.836771000115114 16.199416067560353 46.91499492460156 15.048818007722979 13 19.603246859706218 16.9564818012374 48.1684962518793 15.271775087177089 14 16.079711080181994 20.00259292978974 47.07086139918212 16.846834590846143 15 15.625308855145919 18.3620125321064 51.09048394767165 14.922194665076027 16 17.57907563797119 17.749185785163558 48.75655644970937 15.91518212715588 17 17.841275488906795 18.05987226041852 47.048071523003244 17.050780727671444 18 17.8644723271603 18.94844488163799 47.05266438070256 16.13441841049916 19 18.623863558406615 19.839168588109032 45.95543649008001 15.581531363404341 20 20.453797595668064 18.907690536736467 46.55727526100804 14.081236606587435 21 19.4987738814066 19.46534485384829 45.91590303140236 15.119978233342751 22 17.47547472126005 18.839088358442893 46.37670037475393 17.308736545543127 23 17.60808622014788 19.359360302128646 46.777674293135945 16.25487918458753 24 17.8891226013946 17.867379199121892 47.00301500759856 17.240483191884945 25 17.1460098531332 19.556795045759976 45.738700116623704 17.558494984483115 26 16.17023107306597 19.6935924402725 47.18457823031961 16.951598256341924 27 17.71296616052212 19.56156231577699 46.002702228175494 16.722769295525396 28 15.288286119918935 20.080962197874264 47.77415000156971 16.85660168063709 29 17.180834179233074 18.7673467584308 46.69918875017296 17.352630312163168 30 17.880576397827518 19.908061453598766 45.52208001804586 16.689282130527854 31 17.897436255204756 20.192586081199398 44.015797104988074 17.894180558607772 32 19.142682066111572 21.322603487548704 42.7523542756017 16.78236017073803 33 19.203668239865774 22.670868840774343 40.25273507582866 17.872727843531223 34 17.91092414110654 23.553569580631397 39.38724301798423 19.14826326027783 35 18.613456956784116 24.190988464369305 37.24795966657016 19.94759491227642 36 19.6755116966714 27.051524886893613 35.67795812011427 17.595005296320714 37 20.194330204376353 26.244460955477187 35.500813342774855 18.060395497371605 38 19.10634616659167 26.59677383722215 34.396201997369865 19.90067799881632 39 20.061137331096205 25.513266382258315 34.53049948199542 19.895096804650063 40 19.452147655142664 24.91811341684195 36.38979292606894 19.239946001946443 41 18.644444211894687 25.670876980015837 34.724504116712076 20.960174691377404 42 18.636479382719926 25.86778848669408 35.47918621538061 20.016545915205384 43 20.24031691880874 25.388852262302176 34.35283146770291 20.017999351186177 44 19.09181180678371 25.293041762448098 34.67840112740122 20.936745303366973 45 18.37457021898048 24.586439326024294 34.50404694714493 22.5349435078503 46 19.095532602894547 25.42001392973044 35.03396970574317 20.450483761631848 47 18.101033567394666 24.765560776297598 37.33080551747553 19.802600138832204 48 18.48375232985788 23.413981589035743 36.91925058515332 21.183015495953054 49 18.2100994033936 22.671275802848967 38.18478636235205 20.93383843140538 50 17.545821022730575 22.58494170558968 38.09287107092651 21.776366200753227 51 17.29309757438976 22.764411980498377 36.57118173647229 23.37130870863957 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 410.0 1 920.0 2 1430.0 3 68250.5 4 135071.0 5 94415.0 6 53759.0 7 50897.5 8 48036.0 9 45926.5 10 43817.0 11 41719.5 12 39622.0 13 37264.0 14 34906.0 15 32370.0 16 29834.0 17 27502.5 18 25171.0 19 23021.5 20 20872.0 21 19079.0 22 17286.0 23 16236.0 24 15186.0 25 15187.0 26 15274.5 27 15361.0 28 17277.0 29 19193.0 30 20812.0 31 22431.0 32 23817.5 33 25204.0 34 27418.0 35 29632.0 36 32491.5 37 35351.0 38 39282.5 39 43214.0 40 49014.5 41 54815.0 42 60176.0 43 65537.0 44 72755.5 45 79974.0 46 97313.5 47 114653.0 48 112776.0 49 110899.0 50 111610.0 51 112321.0 52 99829.0 53 87337.0 54 80519.0 55 73701.0 56 71006.5 57 68312.0 58 66863.0 59 65414.0 60 64030.5 61 62647.0 62 58538.0 63 54429.0 64 45437.5 65 36446.0 66 29567.5 67 22689.0 68 19009.5 69 15330.0 70 12078.5 71 8827.0 72 7586.0 73 6345.0 74 5544.0 75 3565.0 76 2387.0 77 1785.5 78 1184.0 79 882.0 80 580.0 81 407.0 82 234.0 83 175.5 84 117.0 85 98.5 86 80.0 87 71.0 88 62.0 89 37.0 90 12.0 91 9.0 92 6.0 93 4.5 94 3.0 95 2.5 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1720062.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.22796834194038 #Duplication Level Percentage of deduplicated Percentage of total 1 78.70182924105205 25.36400061233423 2 8.981502874220105 5.7891118058682425 3 3.178668397272709 3.0732607343049376 4 1.5301335261977684 1.9725237936497313 5 0.9453171875913923 1.5232826197393754 6 0.6117860806715901 1.1829973463954275 7 0.4606608673103354 1.0392314693633802 8 0.3433675620749299 0.8852831136160071 9 0.3035308088289397 0.8803963167968365 >10 4.240111753523551 34.42093674482189 >50 0.618852578992595 12.313814947993341 >100 0.07592605473474819 4.682410964254796 >500 0.005726779853560918 1.3105722155863855 >1k 0.0020320831738441965 1.2534173831254336 >5k 3.694696679716721E-4 0.6647821450614446 >10k+ 1.8473483398583605E-4 3.643977787088552 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 61206 3.5583601056240997 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCG 5596 0.3253371099413858 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGC 5570 0.323825536521358 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCGTCTTC 4226 0.24568881819376276 No Hit GCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCGTCTTCTGC 3572 0.20766693293613833 TruSeq Adapter, Index 16 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTGTCACTGTCGTATGCCGTCTTCTGC 2505 0.14563428527576333 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1743 0.10133355658109998 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.813743923184164E-5 0.0 0.0 0.08371791249385196 0.0 2 5.813743923184164E-5 0.0 0.0 0.5616076629795903 0.0 3 5.813743923184164E-5 0.0 0.0 0.7999130263909091 0.0 4 5.813743923184164E-5 0.0 0.0 1.0883909998593073 0.0 5 5.813743923184164E-5 0.0 0.0 2.026147894668913 0.0 6 5.813743923184164E-5 0.0 0.0 2.4331099692918046 0.0 7 5.813743923184164E-5 0.0 0.0 2.8830356115070273 0.0 8 5.813743923184164E-5 0.0 0.0 3.5188266469464473 0.0 9 5.813743923184164E-5 0.0 0.0 3.761957417814009 0.0 10 1.1627487846368328E-4 0.0 0.0 4.624891428332234 0.0 11 1.1627487846368328E-4 0.0 0.0 5.396084559742614 0.0 12 1.1627487846368328E-4 0.0 0.0 6.350294349854831 0.0 13 1.1627487846368328E-4 0.0 0.0 6.617900982638998 0.0 14 1.1627487846368328E-4 0.0 0.0 6.732722425121885 0.0 15 1.1627487846368328E-4 0.0 0.0 6.979806541857212 0.0 16 1.1627487846368328E-4 0.0 0.0 7.421941767215368 0.0 17 1.1627487846368328E-4 0.0 0.0 7.927214251579303 0.0 18 1.1627487846368328E-4 0.0 0.0 8.495217032874397 0.0 19 1.1627487846368328E-4 0.0 0.0 8.940666092268767 0.0 20 1.7441231769552493E-4 0.0 0.0 9.310129518587122 0.0 21 2.3254975692736657E-4 0.0 0.0 9.728660943617149 0.0 22 2.3254975692736657E-4 0.0 0.0 10.202190386160499 0.0 23 2.3254975692736657E-4 0.0 0.0 10.649906805684912 0.0 24 2.3254975692736657E-4 0.0 0.0 11.01506806150011 0.0 25 2.3254975692736657E-4 0.0 0.0 11.353020995754804 0.0 26 2.3254975692736657E-4 0.0 0.0 11.65940530050661 0.0 27 2.3254975692736657E-4 0.0 0.0 11.967417453556907 0.0 28 2.3254975692736657E-4 0.0 0.0 12.264209080835458 0.0 29 2.3254975692736657E-4 0.0 0.0 12.583848721732124 0.0 30 2.906871961592082E-4 0.0 0.0 12.939591712391763 0.0 31 3.4882463539104985E-4 0.0 0.0 13.28202122946731 0.0 32 3.4882463539104985E-4 0.0 0.0 13.612358159182634 0.0 33 3.4882463539104985E-4 0.0 0.0 13.94310205097258 0.0 34 3.4882463539104985E-4 0.0 0.0 14.267101999811635 0.0 35 4.069620746228915E-4 0.0 0.0 14.599124915264682 0.0 36 4.6509951385473314E-4 0.0 0.0 14.934577939632408 0.0 37 4.6509951385473314E-4 0.0 0.0 15.266658992524688 0.0 38 4.6509951385473314E-4 0.0 0.0 15.594844836988434 0.0 39 4.6509951385473314E-4 0.0 0.0 15.942739273351775 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTACT 30 2.1661326E-6 45.000004 32 TATAGCG 20 7.034265E-4 45.0 1 TACGTAG 40 6.8175723E-9 45.0 1 CGTTTTT 47145 0.0 44.45116 1 TAGTACG 60 3.6379788E-12 41.250004 1 GCGTAAG 95 0.0 40.26316 1 TCTAGCG 45 1.9292202E-8 40.0 1 GTTTTTT 53375 0.0 39.50726 2 TACGTTG 40 3.459554E-7 39.375 1 TAGGGCG 495 0.0 37.272728 5 TGCGACG 55 2.750312E-9 36.81818 1 CGTACTG 55 2.750312E-9 36.81818 1 TGTAACG 55 2.750312E-9 36.81818 1 TATTGCG 80 0.0 36.5625 1 ACGGGCG 250 0.0 36.000004 5 CGAACTA 25 0.002107399 36.0 13 ACGCAGT 25 0.002107399 36.0 38 GCGAACC 25 0.002107399 36.0 33 CGCGCGA 25 0.002107399 36.0 14 CGATTCA 25 0.002107399 36.0 10 >>END_MODULE