##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934925.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 465899 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.296422615202005 33.0 31.0 34.0 30.0 34.0 2 32.48621053060857 34.0 31.0 34.0 31.0 34.0 3 32.56016218107358 34.0 31.0 34.0 31.0 34.0 4 36.025597822704064 37.0 35.0 37.0 35.0 37.0 5 35.88184992884724 37.0 35.0 37.0 35.0 37.0 6 35.862886591299834 37.0 35.0 37.0 35.0 37.0 7 36.058345263673026 37.0 35.0 37.0 35.0 37.0 8 36.05669469133868 37.0 35.0 37.0 35.0 37.0 9 37.83670709746104 39.0 38.0 39.0 35.0 39.0 10 37.43302732995778 39.0 37.0 39.0 34.0 39.0 11 37.27980313329713 39.0 37.0 39.0 34.0 39.0 12 37.12896572003803 39.0 37.0 39.0 34.0 39.0 13 36.953588653334734 39.0 37.0 39.0 33.0 39.0 14 38.0774373844975 40.0 37.0 41.0 33.0 41.0 15 38.206544766140304 40.0 37.0 41.0 33.0 41.0 16 38.32560275939635 40.0 37.0 41.0 34.0 41.0 17 38.36264941543124 40.0 37.0 41.0 34.0 41.0 18 37.95190159240522 39.0 37.0 40.0 34.0 41.0 19 37.53469743442248 38.0 37.0 40.0 34.0 41.0 20 37.017669065612935 38.0 35.0 40.0 34.0 41.0 21 36.967458612274335 38.0 35.0 40.0 34.0 41.0 22 36.73731645700034 37.0 35.0 40.0 33.0 41.0 23 36.62153385175757 37.0 35.0 40.0 33.0 41.0 24 36.38298000210346 37.0 35.0 40.0 33.0 41.0 25 36.240942779443614 37.0 35.0 40.0 32.0 41.0 26 36.43085303896338 37.0 35.0 40.0 33.0 41.0 27 36.526691407365114 37.0 35.0 40.0 33.0 41.0 28 36.53023938664818 37.0 35.0 40.0 33.0 41.0 29 36.48313690306268 37.0 35.0 40.0 33.0 41.0 30 36.23684961762098 37.0 35.0 40.0 32.0 41.0 31 35.745758200811764 37.0 35.0 40.0 31.0 41.0 32 35.160830995559124 37.0 35.0 40.0 26.0 41.0 33 34.34813768649428 37.0 35.0 40.0 20.0 41.0 34 33.720817172820716 37.0 34.0 40.0 15.0 41.0 35 33.323288953185134 38.0 34.0 40.0 10.0 41.0 36 33.12876610595859 37.0 33.0 40.0 10.0 41.0 37 32.93253473392302 37.0 33.0 40.0 10.0 41.0 38 32.8295982605672 37.0 33.0 40.0 10.0 41.0 39 32.779954453647676 37.0 33.0 40.0 10.0 41.0 40 32.63295692843299 37.0 33.0 40.0 10.0 41.0 41 32.48199931744863 37.0 32.0 40.0 10.0 41.0 42 32.366824139996005 37.0 32.0 40.0 8.0 41.0 43 32.23152872189036 37.0 31.0 40.0 8.0 41.0 44 32.10208435733925 37.0 31.0 40.0 8.0 41.0 45 32.060592531857765 37.0 31.0 40.0 8.0 41.0 46 31.986449852865107 36.0 31.0 40.0 8.0 41.0 47 31.91729537947066 36.0 31.0 40.0 8.0 41.0 48 31.910733871504338 36.0 31.0 40.0 8.0 41.0 49 31.833002431857548 36.0 31.0 40.0 8.0 41.0 50 31.72003803399449 36.0 30.0 40.0 8.0 41.0 51 31.085117160586307 35.0 28.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 5.0 11 3.0 12 1.0 13 7.0 14 13.0 15 24.0 16 45.0 17 79.0 18 171.0 19 321.0 20 614.0 21 994.0 22 1513.0 23 2658.0 24 4895.0 25 9752.0 26 16775.0 27 20067.0 28 17968.0 29 14361.0 30 12070.0 31 11345.0 32 12128.0 33 15640.0 34 29265.0 35 43068.0 36 36884.0 37 46596.0 38 84592.0 39 84005.0 40 38.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.07089519402274 17.46751978433094 19.47739746168161 32.98418755996471 2 47.31883949096263 18.80128525710508 19.2305628473124 14.649312404619884 3 23.392623723167468 18.891218912253514 44.022846153350834 13.693311211228185 4 22.095346845560947 19.64867922017433 42.847698750158294 15.408275184106426 5 18.930068534167276 22.53342462636752 42.32440936769557 16.21209747176963 6 19.08053032953494 24.302262936816778 42.54162382834048 14.075582905307805 7 57.92585946739529 5.228386409930049 31.334259142002878 5.511494980671777 8 56.8528801306721 4.093161822626793 31.6051333014237 7.448824745277411 9 52.261756303404816 6.066121627219633 33.95585738539898 7.71626468397657 10 30.723826408728073 18.889931079482892 38.92410157566339 11.46214093612564 11 23.347120298605493 18.477180676498556 42.38064473201273 15.79505429288322 12 21.321573989212254 16.646955670649646 47.42057827984177 14.61089206029633 13 16.306109264025036 23.278221245377217 47.13553795994411 13.280131530653637 14 12.546925406579538 25.854530703006446 44.942358751574915 16.656185138839106 15 10.807277972264375 20.587723948752842 53.36285332228658 15.242144756696193 16 11.932629174992863 20.36557279582055 49.663768327470116 18.038029701716464 17 12.128809033717609 21.13891637457904 42.93097860265851 23.801295989044835 18 14.34860345267966 20.81051901807044 47.45878398537022 17.38209354387968 19 15.200719469241186 21.36299927666726 44.52467165630319 18.911609597788363 20 17.899373040079503 21.64267362668733 44.50621271992428 15.951740613308893 21 15.63901188884286 22.5909478234553 45.09689868404955 16.673141603652294 22 13.61689980017128 21.980729728975593 43.439672547054194 20.962697923798935 23 12.61045848993022 22.383606747385162 43.86701838810558 21.13891637457904 24 17.360415025574213 18.70791738123499 46.06513428876215 17.866533304428643 25 12.8731763751371 22.20266624311278 43.381720072376204 21.54243730937392 26 11.935634118124314 24.02602280751837 42.838254643173734 21.200088431183584 27 14.694815829181863 22.12303525012932 43.29071322325225 19.89143569743657 28 11.006677412915675 19.977935131863344 47.52403417908173 21.49135327613925 29 11.522669076344872 18.14148560095643 45.81829967439295 24.51754564830575 30 13.99037130365165 20.206954726238948 44.40576176381577 21.39691220629364 31 15.68172500906849 23.42803912435957 40.14153282149135 20.748703045080585 32 16.778743890843295 22.97643909946147 37.416049401265084 22.82876760843015 33 15.506794391059007 24.343902863066887 39.141530675103404 21.007772070770702 34 14.04961161110026 24.44306598640478 38.88460803736432 22.62271436513064 35 15.654895159680532 23.252249951169674 34.85347682652249 26.239378062627306 36 18.030302705092733 24.998336549337946 35.60685899733633 21.364501748232986 37 16.440473149759928 25.874492110951085 38.17136332123486 19.513671418054127 38 16.52160661430911 27.287888576708685 33.46691021015285 22.72359459882936 39 17.550155720445847 25.74806986063503 37.033992345980565 19.667782072938557 40 19.72444671484592 24.48814013337655 35.217504223018295 20.569908928759236 41 17.29173061114104 25.74892841581545 31.877080654820034 25.082260318223476 42 19.032451239431722 24.248173960450657 32.534948561812755 24.18442623830487 43 19.700836447384518 23.72703096593897 33.564570861925006 23.0075617247515 44 16.635150536918946 23.913552078884052 34.37032489874415 25.080972485452858 45 16.884990094419607 23.67766404306513 32.42505349871968 27.012292363795588 46 20.02451175040084 22.932867424055427 34.615871680342735 22.426749145201 47 15.325853886786621 23.80043743386442 38.018111221530845 22.85559745781811 48 16.794412522885864 20.970639559217773 36.36560713802777 25.8693407798686 49 16.98715816088895 19.67507979197208 39.973685283720286 23.36407676341868 50 17.204587260328953 20.29109313391958 37.68627964430059 24.81803996145087 51 15.411065488442773 21.75063694062447 32.74593849739965 30.092359073533103 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 668.0 1 648.0 2 628.0 3 15126.5 4 29625.0 5 19699.0 6 9773.0 7 9636.0 8 9499.0 9 9743.5 10 9988.0 11 9941.5 12 9895.0 13 9307.0 14 8719.0 15 8034.5 16 7350.0 17 6856.0 18 6362.0 19 5849.0 20 5336.0 21 4975.0 22 4614.0 23 4325.0 24 4036.0 25 4006.0 26 3966.5 27 3957.0 28 4411.5 29 4866.0 30 4751.5 31 4637.0 32 5237.5 33 5838.0 34 6283.0 35 6728.0 36 7792.5 37 8857.0 38 9360.5 39 9864.0 40 12549.5 41 15235.0 42 19453.5 43 23672.0 44 26443.0 45 29214.0 46 35286.5 47 41359.0 48 48729.5 49 56100.0 50 54311.0 51 52522.0 52 40921.0 53 29320.0 54 24007.5 55 18695.0 56 15827.0 57 12959.0 58 11011.5 59 9064.0 60 8238.5 61 7413.0 62 6152.5 63 4892.0 64 4546.0 65 4200.0 66 3212.5 67 2225.0 68 2008.0 69 1791.0 70 1308.0 71 825.0 72 698.5 73 572.0 74 402.0 75 201.0 76 170.0 77 138.5 78 107.0 79 86.5 80 66.0 81 52.0 82 38.0 83 22.5 84 7.0 85 4.5 86 2.0 87 2.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 465899.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.877309172595005 #Duplication Level Percentage of deduplicated Percentage of total 1 74.84224361889446 27.59980557104646 2 10.961153052463864 8.084356600076866 3 4.5312186963956975 5.012974583868811 4 2.3363813521718724 3.4463782987651084 5 1.4107671592470838 2.601264835104914 6 0.872726026713426 1.931027250604885 7 0.6365380119452825 1.6431666346630607 8 0.43227782858782465 1.275299450663299 9 0.33815938344588126 1.1223367319653081 >10 3.2493941697979887 27.891890862524114 >50 0.32092243732028214 7.435989352363823 >100 0.05991343099694731 4.083100178332277 >500 0.004152416009689418 0.982875387154938 >1k 0.0035592137225909292 3.075942759578363 >5k 0.0 0.0 >10k+ 5.932022870984882E-4 3.813591503287789 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17433 3.7417981150421014 No Hit GCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 4039 0.866926093423682 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 3876 0.8319399698217853 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGCT 2186 0.46920040609660035 Illumina Single End Adapter 1 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 1676 0.35973462059373384 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 1155 0.2479078083447271 No Hit ACTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 1129 0.24232719967203195 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCC 977 0.2097021028162756 No Hit AGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 642 0.13779810645654958 No Hit GCCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 640 0.13736882886634227 No Hit CGTTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTC 606 0.13007110983281783 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 585 0.125563695135641 No Hit ACCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 533 0.11440247779025067 No Hit GGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 510 0.10946578550286651 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGC 468 0.10045095610851278 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1463879510365982E-4 0.0 0.0 0.4958156166894542 0.0 2 2.1463879510365982E-4 0.0 0.0 2.9392636601495172 0.0 3 2.1463879510365982E-4 0.0 0.0 4.084146993232439 0.0 4 2.1463879510365982E-4 0.0 0.0 5.2395476272754395 0.0 5 4.2927759020731964E-4 0.0 0.0 8.178382009834749 0.0 6 4.2927759020731964E-4 0.0 0.0 9.53082105778291 0.0 7 4.2927759020731964E-4 0.0 0.0 11.080083880841126 0.0 8 4.2927759020731964E-4 0.0 0.0 13.17345604948712 0.0 9 4.2927759020731964E-4 0.0 0.0 13.882837267304716 0.0 10 6.439163853109794E-4 0.0 0.0 15.409992294467255 0.0 11 6.439163853109794E-4 0.0 0.0 17.866747943223746 0.0 12 6.439163853109794E-4 0.0 0.0 19.81931706228174 0.0 13 6.439163853109794E-4 0.0 0.0 20.52483478178747 0.0 14 6.439163853109794E-4 0.0 0.0 20.800860272290777 0.0 15 6.439163853109794E-4 0.0 0.0 21.343252507517725 0.0 16 6.439163853109794E-4 0.0 0.0 22.480623482772017 0.0 17 6.439163853109794E-4 0.0 0.0 23.899600557202312 0.0 18 6.439163853109794E-4 0.0 0.0 25.463888095917785 0.0 19 6.439163853109794E-4 0.0 0.0 26.33746799198968 0.0 20 6.439163853109794E-4 0.0 0.0 27.096001493886014 0.0 21 6.439163853109794E-4 0.0 0.0 28.010362761027604 0.0 22 6.439163853109794E-4 0.0 0.0 28.98546680718353 0.0 23 6.439163853109794E-4 0.0 0.0 29.901115907095743 0.0 24 6.439163853109794E-4 0.0 0.0 30.577872028057584 0.0 25 6.439163853109794E-4 0.0 0.0 31.157396774837466 0.0 26 6.439163853109794E-4 0.0 0.0 31.71781866885312 0.0 27 6.439163853109794E-4 0.0 0.0 32.2383177469795 0.0 28 6.439163853109794E-4 0.0 0.0 32.7721244304023 0.0 29 6.439163853109794E-4 0.0 0.0 33.34413681935355 0.0 30 6.439163853109794E-4 0.0 0.0 34.01166347212593 0.0 31 6.439163853109794E-4 0.0 0.0 34.58517833264291 0.0 32 6.439163853109794E-4 0.0 0.0 35.12284851437758 0.0 33 6.439163853109794E-4 0.0 0.0 35.596985612761564 0.0 34 6.439163853109794E-4 0.0 0.0 36.09537689499226 0.0 35 6.439163853109794E-4 0.0 0.0 36.657730538163854 0.0 36 6.439163853109794E-4 0.0 0.0 37.148394823770815 0.0 37 6.439163853109794E-4 0.0 0.0 37.62553686528625 0.0 38 6.439163853109794E-4 0.0 0.0 38.04687282007474 0.0 39 6.439163853109794E-4 0.0 0.0 38.49675573461201 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGT 20 7.028964E-4 45.0 28 TCGCCGT 20 7.028964E-4 45.0 31 AAGTACG 25 3.8872222E-5 45.0 1 CTGTCGG 40 6.7993824E-9 45.0 2 GATACGC 20 7.028964E-4 45.0 10 TGCCCGC 20 7.028964E-4 45.0 16 ATGATCG 20 7.028964E-4 45.0 27 GTACATC 25 3.8872222E-5 45.0 25 AGTCAAT 25 3.8872222E-5 45.0 30 ACGCATT 25 3.8872222E-5 45.0 11 GACACGC 20 7.028964E-4 45.0 22 CGGCACT 25 3.8872222E-5 45.0 17 GCAGTAG 40 6.7993824E-9 45.0 1 CGCGCAT 50 2.1827873E-11 45.0 36 TTACTCC 20 7.028964E-4 45.0 20 TTACTAG 20 7.028964E-4 45.0 1 TTGTACG 20 7.028964E-4 45.0 1 TAAGTAG 25 3.8872222E-5 45.0 1 GCGTTAG 25 3.8872222E-5 45.0 1 ACGGGTG 20 7.028964E-4 45.0 5 >>END_MODULE