##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934923.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1736815 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.620942932897286 34.0 31.0 34.0 31.0 34.0 2 32.79359862737252 34.0 31.0 34.0 31.0 34.0 3 32.830742479769 34.0 31.0 34.0 31.0 34.0 4 36.225197272018036 37.0 37.0 37.0 35.0 37.0 5 36.12617809035505 37.0 35.0 37.0 35.0 37.0 6 36.11768668511039 37.0 36.0 37.0 35.0 37.0 7 36.28499350823202 37.0 37.0 37.0 35.0 37.0 8 36.315266162487085 37.0 37.0 37.0 35.0 37.0 9 38.13781030219108 39.0 39.0 39.0 37.0 39.0 10 37.55542875896396 39.0 38.0 39.0 34.0 39.0 11 37.50514015597516 39.0 37.0 39.0 35.0 39.0 12 37.562601658783464 39.0 37.0 39.0 35.0 39.0 13 37.60148662926103 39.0 37.0 39.0 35.0 39.0 14 38.954206406554526 40.0 38.0 41.0 35.0 41.0 15 38.994691432305686 40.0 38.0 41.0 35.0 41.0 16 39.072504555752914 41.0 38.0 41.0 35.0 41.0 17 39.091314849307494 41.0 39.0 41.0 35.0 41.0 18 38.49776919245861 39.0 38.0 41.0 35.0 41.0 19 37.87886907932048 38.0 37.0 40.0 35.0 41.0 20 37.22808416555592 38.0 35.0 40.0 34.0 41.0 21 37.18905064730556 38.0 35.0 40.0 34.0 41.0 22 37.02354827658674 38.0 35.0 40.0 34.0 41.0 23 36.90402719921235 37.0 35.0 40.0 34.0 41.0 24 36.696559506913516 37.0 35.0 40.0 33.0 41.0 25 36.56513675895245 37.0 35.0 40.0 33.0 41.0 26 36.71096173167551 37.0 35.0 40.0 33.0 41.0 27 36.756230226017166 37.0 35.0 40.0 34.0 41.0 28 36.691785250588005 37.0 35.0 40.0 33.0 41.0 29 36.54541502693148 37.0 35.0 40.0 33.0 41.0 30 36.2004364310534 37.0 35.0 40.0 33.0 41.0 31 35.57496739721847 37.0 35.0 40.0 30.0 41.0 32 34.60932223639248 37.0 35.0 40.0 21.0 41.0 33 33.315024916297936 37.0 33.0 40.0 15.0 41.0 34 32.19483998007848 37.0 31.0 40.0 8.0 41.0 35 31.528113241767258 37.0 27.0 40.0 7.0 41.0 36 31.20748093492974 37.0 24.0 40.0 7.0 41.0 37 30.972359750462772 37.0 23.0 40.0 7.0 41.0 38 30.834445810290674 37.0 23.0 40.0 7.0 41.0 39 30.76289702702936 37.0 23.0 40.0 7.0 41.0 40 30.685513425436792 37.0 22.0 40.0 7.0 41.0 41 30.56522312393663 37.0 22.0 40.0 7.0 41.0 42 30.429023816583804 37.0 21.0 40.0 7.0 41.0 43 30.328799555508215 37.0 21.0 40.0 7.0 41.0 44 30.21693617339786 36.0 20.0 40.0 7.0 41.0 45 30.15738463797238 36.0 20.0 40.0 7.0 41.0 46 30.070383431741433 36.0 20.0 40.0 7.0 41.0 47 30.016909112369483 36.0 20.0 40.0 7.0 41.0 48 29.925094497686857 36.0 20.0 40.0 7.0 41.0 49 29.781778715637532 35.0 20.0 40.0 7.0 41.0 50 29.674302098957 35.0 20.0 40.0 7.0 41.0 51 29.0637275702939 35.0 19.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 14.0 10 16.0 11 9.0 12 19.0 13 17.0 14 28.0 15 53.0 16 97.0 17 238.0 18 558.0 19 1174.0 20 2016.0 21 3300.0 22 5702.0 23 10873.0 24 23851.0 25 55849.0 26 97621.0 27 108636.0 28 90529.0 29 66635.0 30 48807.0 31 40514.0 32 38692.0 33 44691.0 34 70664.0 35 96608.0 36 106471.0 37 155946.0 38 299433.0 39 367546.0 40 205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.663807026079343 15.452595699599556 18.67746420891114 39.20613306540996 2 54.50465363323095 16.726594369578798 17.45597544931383 11.312776547876428 3 20.781890990116967 15.999458779432466 51.14701335490539 12.07163687554518 4 18.82572409842154 18.10653408681984 50.434732542038155 12.63300927272047 5 17.05149944006702 20.812809654453698 49.57373122641157 12.56195967906772 6 17.637226762781296 23.357352395044952 48.59400684586441 10.411413996309337 7 55.86213845458497 3.9176884124100724 36.80967748436074 3.4104956486442135 8 57.59865040318053 2.896739146080613 36.39570132685404 3.1089091238848123 9 53.750687321332435 4.4130203850151 37.678566801875846 4.157725491776614 10 26.733129320048484 16.426850297815253 45.08298235563373 11.757038026502535 11 19.393487504426204 18.466042727636506 47.66345292964421 14.477016838293084 12 16.592613490786295 16.234026076467558 52.35606555678066 14.817294875965489 13 15.886493380123962 17.70971577283706 53.5919484804081 12.811842366630874 14 14.723560079801246 19.37765392399306 52.259624657778744 13.639161338426947 15 13.962857299136639 19.0108906245052 53.56321772900395 13.463034347354208 16 15.842504814847869 18.36280778321237 51.34611343177022 14.448573970169534 17 16.122269786937586 18.24028465898786 49.76494330138789 15.87250225268667 18 16.59422563715767 17.99690813356633 51.16371058518035 14.245155644095659 19 15.453056312848517 20.43407041049277 49.624571413766006 14.488301862892708 20 16.064174940911958 19.701925651263952 50.23960525444564 13.994294153378453 21 15.707660286213557 19.233194093786615 51.348704381295654 13.71044123870418 22 15.912345298722085 17.906455206800956 50.13308844062263 16.048111053854324 23 14.405276324766886 19.2440760817934 50.249738745922855 16.100908847516862 24 14.900090107466829 18.480667198291126 50.97359246667031 15.645650227571734 25 14.477650181510409 19.816042583694866 50.183295284759744 15.523011950034979 26 14.369060608067066 20.39405463448899 50.34036440265659 14.896520354787354 27 15.210428283956553 19.683098084712533 50.209032050045636 14.897441581285284 28 14.273771242187566 19.32376217386423 50.72883410150189 15.673632482446317 29 15.007988761036724 18.49177949292239 50.73626149014143 15.763970255899448 30 15.850277663424142 19.47996764191926 49.51557880372982 15.154175890926783 31 15.738003183989083 20.915123372379902 47.495674553708945 15.851198889922069 32 16.184107115611045 21.490371743680242 46.23393971148337 16.091581429225336 33 17.2193353926584 22.18952507895199 43.47924217605214 17.11189735233747 34 16.032968393294624 23.67316035386613 41.67985651897295 18.614014733866302 35 17.95148015188722 23.708685150692503 39.666170547813095 18.673664149607184 36 19.014517953840794 25.72375296159925 37.678624378531964 17.58310470602799 37 18.295673402175822 26.79266358247712 37.45275115657108 17.458911858775977 38 18.879155235301397 27.01416097857285 36.378658636642356 17.728025149483393 39 18.63721812628288 25.637215247450072 37.41970215595789 18.305864470309157 40 18.667273140777805 24.42810546891868 37.771610678166645 19.133010712136873 41 18.558165377429376 25.417099691101242 36.0561717857112 19.968563145758182 42 18.92504383022947 26.19202390582762 35.957427820464474 18.925504443478435 43 18.899767678192553 25.581423467669268 36.621344242190446 18.897464611947733 44 18.142174036958455 25.398905467767147 36.14938839197036 20.309532103304036 45 18.903682890808753 23.810768561994227 36.80236524903343 20.483183298163592 46 19.284207011109416 24.395229198273853 36.53486410469739 19.78569968591934 47 17.58316228268411 24.927295077483784 38.115516045174644 19.37402659465746 48 18.620981509256886 23.74962215319421 37.41290811053567 20.21648822701324 49 18.58200211306328 23.078911686046013 38.2339512268146 20.105134974076112 50 17.90058238787666 22.68836922758037 38.253354559927224 21.157693824615748 51 18.036175413040535 22.707714984036873 36.34296110984762 22.913148493074967 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 382.0 1 676.0 2 970.0 3 63404.5 4 125839.0 5 90062.5 6 54286.0 7 52833.5 8 51381.0 9 51261.0 10 51141.0 11 50552.5 12 49964.0 13 47907.0 14 45850.0 15 43188.0 16 40526.0 17 37569.0 18 34612.0 19 31711.5 20 28811.0 21 26432.0 22 24053.0 23 22177.5 24 20302.0 25 18938.5 26 17852.5 27 18130.0 28 18363.0 29 18596.0 30 20201.0 31 21806.0 32 23969.5 33 26133.0 34 30920.0 35 35707.0 36 39598.0 37 43489.0 38 47827.0 39 52165.0 40 57468.0 41 62771.0 42 69531.0 43 76291.0 44 85056.5 45 93822.0 46 108644.0 47 123466.0 48 133848.0 49 144230.0 50 138739.0 51 133248.0 52 113461.0 53 93674.0 54 79832.0 55 65990.0 56 57576.5 57 49163.0 58 43820.5 59 38478.0 60 34089.5 61 29701.0 62 26518.0 63 23335.0 64 19510.5 65 15686.0 66 12661.5 67 9637.0 68 7887.5 69 6138.0 70 5055.0 71 3972.0 72 3146.0 73 2320.0 74 1962.0 75 1127.0 76 650.0 77 556.5 78 463.0 79 343.0 80 223.0 81 190.0 82 157.0 83 101.5 84 46.0 85 25.0 86 4.0 87 11.5 88 19.0 89 11.0 90 3.0 91 4.5 92 6.0 93 3.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1736815.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.92123795962593 #Duplication Level Percentage of deduplicated Percentage of total 1 79.00060281615073 33.118030696097485 2 9.489736650434702 7.956430165941132 3 3.4355651875395306 4.3206943725795455 4 1.783469891261861 2.990610628216665 5 1.0226855938754154 2.1436123069366317 6 0.7340283489048175 1.8462826250130107 7 0.5463532072349845 1.603266196735182 8 0.42860507666452835 1.4374124327645923 9 0.34992206232012013 1.3202249437660327 >10 2.8928471351108946 25.348457360673066 >50 0.2554496438455092 6.787236923557419 >100 0.05598736858506819 4.537827398756653 >500 0.0019546545002342773 0.6277306987469999 >1k 0.0026527453931750903 2.257840506747251 >5k 0.0 0.0 >10k+ 1.3961817858816264E-4 3.70434274346831 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 63290 3.6440265658691335 No Hit CCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTGC 3978 0.22903993804751802 No Hit CGCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTG 3695 0.2127457443654045 No Hit GCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTGC 2956 0.1701965954923236 No Hit CTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTGCT 2639 0.15194479550211162 Illumina Single End Adapter 2 (95% over 21bp) CGTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTT 2374 0.13668698163016788 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCT 2348 0.13518998857103376 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTC 2232 0.12851109646105083 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 2105 0.12119886113374193 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 2053 0.11820487501547373 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCC 1979 0.11394420246255359 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1515331224108497E-4 0.0 0.0 0.16403589328742554 0.0 2 1.1515331224108497E-4 0.0 0.0 0.7394569945561271 0.0 3 1.7272996836162745E-4 0.0 0.0 1.2026036163897709 0.0 4 1.7272996836162745E-4 0.0 0.0 1.622049556227923 0.0 5 1.7272996836162745E-4 0.0 0.0 2.6185863203622723 0.0 6 1.7272996836162745E-4 0.0 0.0 3.337833908620089 0.0 7 1.7272996836162745E-4 0.0 0.0 3.9893137726240275 0.0 8 1.7272996836162745E-4 0.0 0.0 4.860160696447233 0.0 9 1.7272996836162745E-4 0.0 0.0 5.202281187115496 0.0 10 1.7272996836162745E-4 0.0 0.0 5.988605579753744 0.0 11 1.7272996836162745E-4 0.0 0.0 7.2074458131695085 0.0 12 1.7272996836162745E-4 0.0 0.0 8.074319947720396 0.0 13 2.3030662448216994E-4 0.0 0.0 8.442177203674543 0.0 14 2.3030662448216994E-4 0.0 0.0 8.583700624418835 0.0 15 2.3030662448216994E-4 0.0 0.0 8.831798435642254 0.0 16 2.3030662448216994E-4 0.0 0.0 9.434741178536575 0.0 17 2.3030662448216994E-4 0.0 0.0 10.206556253832446 0.0 18 2.3030662448216994E-4 0.0 0.0 11.041878380829276 0.0 19 2.3030662448216994E-4 0.0 0.0 11.56012586257028 0.0 20 2.3030662448216994E-4 0.0 0.0 12.026151317209951 0.0 21 2.3030662448216994E-4 0.0 0.0 12.692140498556265 0.0 22 2.3030662448216994E-4 0.0 0.0 13.355653883689397 0.0 23 2.3030662448216994E-4 0.0 0.0 14.08094702083987 0.0 24 2.3030662448216994E-4 0.0 0.0 14.630343473542087 0.0 25 2.3030662448216994E-4 0.0 0.0 15.14317874960776 0.0 26 2.8788328060271246E-4 0.0 0.0 15.622446835155154 0.0 27 2.8788328060271246E-4 0.0 0.0 16.09446026203136 0.0 28 2.8788328060271246E-4 0.0 0.0 16.601940909077822 0.0 29 2.8788328060271246E-4 0.0 0.0 17.117770171261764 0.0 30 2.8788328060271246E-4 0.0 0.0 17.68858514004082 0.0 31 2.8788328060271246E-4 0.0 0.0 18.22335712208842 0.0 32 2.8788328060271246E-4 0.0 0.0 18.743965246730365 0.0 33 2.8788328060271246E-4 0.0 0.0 19.247876141097354 0.0 34 2.8788328060271246E-4 0.0 0.0 19.708662120030056 0.0 35 2.8788328060271246E-4 0.0 0.0 20.207448692002316 0.0 36 2.8788328060271246E-4 0.0 0.0 20.68660162423747 0.0 37 2.8788328060271246E-4 0.0 0.0 21.188267029015755 0.0 38 2.8788328060271246E-4 0.0 0.0 21.689471820545076 0.0 39 2.8788328060271246E-4 0.0 0.0 22.188834159078542 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATCG 20 7.034283E-4 45.000004 2 CTATCGT 20 7.034283E-4 45.000004 2 CTGCGAT 20 7.034283E-4 45.000004 19 CGTAGCG 20 7.034283E-4 45.000004 2 CTACGAC 20 7.034283E-4 45.000004 25 TTGCGTC 20 7.034283E-4 45.000004 11 CGTTTCG 25 3.8916332E-5 45.0 39 CGTTTTT 55000 0.0 44.607273 1 ACCGGTA 75 0.0 42.0 41 GCCCTCG 340 0.0 41.02941 13 CGTGTAC 345 0.0 39.782608 18 CCGGTAT 85 0.0 39.705883 42 ACTAGCG 40 3.4595905E-7 39.375004 1 CCGCCCG 80 0.0 39.375004 29 CGCCCCG 80 0.0 39.375004 25 GTTTTTT 62905 0.0 39.033863 2 AGGGTCG 180 0.0 38.75 6 AAGTACG 35 6.250135E-6 38.571426 1 CGGTAAC 35 6.250135E-6 38.571426 23 TACGTCG 35 6.250135E-6 38.571426 1 >>END_MODULE