##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934921.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1245065 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.65029054707987 34.0 31.0 34.0 31.0 34.0 2 32.80394356921125 34.0 31.0 34.0 31.0 34.0 3 32.84459445892383 34.0 31.0 34.0 31.0 34.0 4 36.23232521996844 37.0 37.0 37.0 35.0 37.0 5 36.1234594177814 37.0 37.0 37.0 35.0 37.0 6 36.11764767301305 37.0 36.0 37.0 35.0 37.0 7 36.25232497901716 37.0 37.0 37.0 35.0 37.0 8 36.24995321529398 37.0 37.0 37.0 35.0 37.0 9 37.99517294277809 39.0 39.0 39.0 35.0 39.0 10 37.63761008461405 39.0 38.0 39.0 35.0 39.0 11 37.539057800195174 39.0 37.0 39.0 35.0 39.0 12 37.45251131467032 39.0 37.0 39.0 35.0 39.0 13 37.44247890672374 39.0 37.0 39.0 35.0 39.0 14 38.757639962572235 40.0 38.0 41.0 35.0 41.0 15 38.79202370960552 40.0 38.0 41.0 35.0 41.0 16 38.86970800721247 40.0 38.0 41.0 35.0 41.0 17 38.874707746181926 40.0 38.0 41.0 35.0 41.0 18 38.33045905233863 39.0 38.0 41.0 35.0 41.0 19 37.81800548565737 38.0 37.0 41.0 35.0 41.0 20 37.24910586997466 38.0 35.0 41.0 34.0 41.0 21 37.18128933027593 38.0 35.0 41.0 34.0 41.0 22 36.9888592161855 38.0 35.0 40.0 34.0 41.0 23 36.89559259958315 38.0 35.0 40.0 33.0 41.0 24 36.68543810965693 37.0 35.0 40.0 33.0 41.0 25 36.54866211804203 37.0 35.0 40.0 33.0 41.0 26 36.66920763173007 37.0 35.0 40.0 33.0 41.0 27 36.68631677864208 37.0 35.0 40.0 33.0 41.0 28 36.579630782328636 37.0 35.0 40.0 33.0 41.0 29 36.43881564416316 37.0 35.0 40.0 33.0 41.0 30 36.12437663897066 37.0 35.0 40.0 32.0 41.0 31 35.55891620116219 37.0 35.0 40.0 30.0 41.0 32 34.81328364382583 37.0 35.0 40.0 22.0 41.0 33 33.82246629694032 37.0 34.0 40.0 16.0 41.0 34 32.97988619068081 37.0 33.0 40.0 10.0 41.0 35 32.487207495191015 37.0 32.0 40.0 10.0 41.0 36 32.24116170641693 37.0 31.0 40.0 8.0 41.0 37 31.988424700718436 37.0 30.0 40.0 8.0 41.0 38 31.832211972868887 37.0 30.0 40.0 7.0 41.0 39 31.735698939412803 37.0 29.0 40.0 7.0 41.0 40 31.597319015473087 36.0 29.0 40.0 7.0 41.0 41 31.44832438467068 36.0 28.0 40.0 7.0 41.0 42 31.311282543481667 36.0 27.0 40.0 7.0 41.0 43 31.19068803636758 36.0 25.0 40.0 7.0 41.0 44 31.075331006814906 36.0 24.0 40.0 7.0 41.0 45 31.033066546726477 35.0 24.0 40.0 7.0 41.0 46 31.00114612490111 35.0 24.0 40.0 7.0 41.0 47 30.991709669776277 35.0 24.0 40.0 7.0 41.0 48 30.948766530261473 35.0 24.0 40.0 7.0 41.0 49 30.825723958186924 35.0 24.0 40.0 7.0 41.0 50 30.72388429519744 35.0 24.0 40.0 7.0 41.0 51 30.17130671892632 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 3.0 9 16.0 10 10.0 11 15.0 12 21.0 13 25.0 14 38.0 15 76.0 16 131.0 17 284.0 18 521.0 19 994.0 20 1621.0 21 2561.0 22 4007.0 23 6670.0 24 12640.0 25 27779.0 26 50676.0 27 65860.0 28 62290.0 29 49479.0 30 38984.0 31 32772.0 32 31453.0 33 36849.0 34 64107.0 35 82826.0 36 86209.0 37 111018.0 38 199720.0 39 275230.0 40 179.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.738419279314737 15.027408207603617 18.100982679619136 38.13318983346251 2 52.26048439238112 17.294759711340372 17.553220113006148 12.89153578327236 3 23.639729652668738 17.461337359896874 46.300875857886936 12.598057129547454 4 21.35350363234048 18.49252850252798 46.43797713372394 13.715990731407599 5 19.16229273170477 21.114881552368754 45.12760377972234 14.595221936204133 6 20.530574708950937 23.831366233891405 44.31937288414661 11.318686173011047 7 58.45646612827443 4.476071530402027 33.40676992767445 3.6606924136490866 8 58.768578347315206 4.072076558251979 33.393196339146954 3.7661487552858683 9 53.5871621160341 6.031331697541895 35.32699096031131 5.054515226112692 10 29.986868155477826 19.68708461004044 39.82820174047138 10.497845494010354 11 23.688883712898523 17.89922614481975 44.65003835141137 13.761851790870356 12 21.853236578009984 16.13200917221189 47.5622557858425 14.452498463935617 13 18.71460526157269 17.53016910763695 48.311774887254884 15.443450743535477 14 15.323617642452403 20.22006883174774 48.060141438398794 16.39617208740106 15 14.439567412143143 18.650190953885943 52.016481067253515 14.8937605667174 16 16.993811568070743 17.4903318300651 50.17770156578171 15.338155036082455 17 17.093485079092254 17.767104528679226 46.96863215976676 18.17077823246176 18 16.96835104994518 18.93901121628188 47.92464650439937 16.167991229373566 19 18.165316670214004 19.015071502291043 47.064771718745604 15.754840108749343 20 19.782983217743652 18.706493235292935 46.58800946135342 14.92251408560999 21 18.45759056756073 19.018043234690555 47.515832506736594 15.008533691012115 22 17.43804540325204 18.685128888853193 46.91771112351564 16.95911458437913 23 17.368490801685052 18.815885114431776 47.83798436226221 15.977639721620958 24 17.505913345889574 17.177255805921778 48.655130455036485 16.661700393152167 25 16.3325609506331 18.96077714818102 47.05151939858562 17.655142502600267 26 15.983984771879381 20.031644934200223 46.729688811427515 17.25468148249288 27 16.696638328119416 19.783465120294924 47.41053679928357 16.109359752302087 28 15.096802174986848 19.616887471738423 48.576419704995324 16.70989064827941 29 16.958070462184704 18.596378502327187 47.20685265427909 17.238698381209012 30 18.119054025291852 18.72103062892299 46.15044194479807 17.009473400987098 31 17.696746756193452 20.417488243585677 44.59108560597238 17.294679394248494 32 19.19096593350548 21.072715079132415 43.330830117303115 16.405488870058992 33 19.36782416982246 23.095260086822776 40.96669651785248 16.570219225502285 34 17.890632215988724 24.036737037825333 39.834948376189196 18.237682369996747 35 19.159642267672773 24.38306433800645 37.450815820860754 19.00647757346002 36 19.709814347042123 26.888716653347416 35.51147932035677 17.88998967925369 37 19.936710131599554 27.17376201242506 36.37528964351259 16.514238212462804 38 19.7049953215294 26.636199716480665 35.19149602631188 18.467308935678055 39 20.353877106817716 26.178392292771864 34.95247236088076 18.515258239529665 40 20.098388437551453 25.829093260191232 35.7946773863212 18.277840915936117 41 17.65731106408099 27.538803195013916 34.58044359129845 20.223442149606647 42 18.568187203077752 27.01858939091533 34.53787553260271 19.875347873404202 43 20.15123708400766 26.36866348343259 34.09187472140009 19.38822471115966 44 19.390232638456627 26.350752771943633 34.0642456417938 20.194768947805937 45 19.355937240224407 25.236513756309915 33.92545770702735 21.482091296438337 46 19.110407890351105 26.120082084067903 35.189648733198666 19.579861292382326 47 17.971591844602493 25.70090718155277 37.16906346255015 19.15843751129459 48 18.339604759590863 24.00693939673832 37.29925746848558 20.35419837518523 49 18.401448920337494 23.700288739945304 38.04877656989796 19.849485769819246 50 18.03158871223591 23.473152004112237 37.49884544180424 20.996413841847613 51 17.19749571307522 24.140908305992056 36.26372920289302 22.397866778039702 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 301.0 1 722.5 2 1144.0 3 52718.0 4 104292.0 5 72676.0 6 41060.0 7 39117.0 8 37174.0 9 35392.0 10 33610.0 11 31710.5 12 29811.0 13 27965.5 14 26120.0 15 23905.0 16 21690.0 17 19852.0 18 18014.0 19 16471.0 20 14928.0 21 13731.0 22 12534.0 23 11538.0 24 10542.0 25 10651.5 26 11383.5 27 12006.0 28 12696.0 29 13386.0 30 14677.0 31 15968.0 32 17647.5 33 19327.0 34 21236.0 35 23145.0 36 24530.0 37 25915.0 38 29248.5 39 32582.0 40 35614.5 41 38647.0 42 43042.0 43 47437.0 44 52220.5 45 57004.0 46 64094.0 47 71184.0 48 76428.5 49 81673.0 50 81180.5 51 80688.0 52 71116.0 53 61544.0 54 56900.5 55 52257.0 56 50808.5 57 49360.0 58 48177.0 59 46994.0 60 45839.5 61 44685.0 62 40176.5 63 35668.0 64 31116.5 65 26565.0 66 21610.5 67 16656.0 68 14035.0 69 11414.0 70 9337.5 71 7261.0 72 6244.5 73 5228.0 74 4023.0 75 2402.0 76 1986.0 77 1348.0 78 710.0 79 591.0 80 472.0 81 356.0 82 240.0 83 236.0 84 232.0 85 124.5 86 17.0 87 13.0 88 9.0 89 5.5 90 2.0 91 3.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1245065.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.388485473590165 #Duplication Level Percentage of deduplicated Percentage of total 1 78.9674544445385 26.366037056078675 2 9.024155879101144 6.026057949615638 3 3.163416752795114 3.1686508289283433 4 1.552246122717808 2.0730858847920075 5 0.8621212265715406 1.4392461024928809 6 0.6126772439552782 1.227381915588004 7 0.4333766827006485 1.012885375246031 8 0.35187101819816796 0.939875230374953 9 0.26567108967965536 0.7983319786669841 >10 4.0826427775827705 34.45284693556949 >50 0.5991902659543344 12.324276211930117 >100 0.07979177518445534 4.586547151439932 >500 0.003426640649441945 0.7868162631539545 >1k 0.0017133203247209725 0.9184698776056601 >5k 0.0 0.0 >10k+ 2.4476004638871037E-4 3.8794912385172964 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 47472 3.8128129856674153 No Hit CCTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGCCGTCTTCTGC 2607 0.20938665852786803 RNA PCR Primer, Index 30 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGCCGTCTTCTGC 2453 0.19701782637854248 RNA PCR Primer, Index 23 (96% over 25bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1462 0.11742358832671387 No Hit CTGTCTCTTATACACATCTGACGCCGTGGATATCGTATGCCGTCTTCTGCT 1372 0.1101950500576275 RNA PCR Primer, Index 30 (95% over 24bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.4095127563621176E-4 0.0 0.0 0.1175039054185926 0.0 2 2.4095127563621176E-4 0.0 0.0 0.6991602848044078 0.0 3 3.21268367514949E-4 0.0 0.0 1.0220349941569316 0.0 4 3.21268367514949E-4 0.0 0.0 1.335512603759643 0.0 5 3.21268367514949E-4 0.0 0.0 2.177637312108203 0.0 6 3.21268367514949E-4 0.0 0.0 2.6213089276463477 0.0 7 3.21268367514949E-4 0.0 0.0 3.0807226931927247 0.0 8 4.0158545939368627E-4 0.0 0.0 3.7078385465819053 0.0 9 4.0158545939368627E-4 0.0 0.0 3.9295940372590987 0.0 10 4.0158545939368627E-4 0.0 0.0 4.455269403605434 0.0 11 4.819025512724235E-4 0.0 0.0 5.271772959644677 0.0 12 4.819025512724235E-4 0.0 0.0 5.945954628874798 0.0 13 4.819025512724235E-4 0.0 0.0 6.205539469826877 0.0 14 4.819025512724235E-4 0.0 0.0 6.315493568608868 0.0 15 5.622196431511608E-4 0.0 0.0 6.537168742194183 0.0 16 5.622196431511608E-4 0.0 0.0 6.987988578909535 0.0 17 5.622196431511608E-4 0.0 0.0 7.517760116941686 0.0 18 5.622196431511608E-4 0.0 0.0 8.084557834329935 0.0 19 5.622196431511608E-4 0.0 0.0 8.442531112833466 0.0 20 5.622196431511608E-4 0.0 0.0 8.791187608679065 0.0 21 5.622196431511608E-4 0.0 0.0 9.219197391300856 0.0 22 5.622196431511608E-4 0.0 0.0 9.712906555079453 0.0 23 5.622196431511608E-4 0.0 0.0 10.14894804688912 0.0 24 5.622196431511608E-4 0.0 0.0 10.513427009834828 0.0 25 5.622196431511608E-4 0.0 0.0 10.841602647251348 0.0 26 5.622196431511608E-4 0.0 0.0 11.155642476497212 0.0 27 5.622196431511608E-4 0.0 0.0 11.45530554629678 0.0 28 5.622196431511608E-4 0.0 0.0 11.755771787015135 0.0 29 5.622196431511608E-4 0.0 0.0 12.067402103504635 0.0 30 5.622196431511608E-4 0.0 0.0 12.416942087360901 0.0 31 6.42536735029898E-4 0.0 0.0 12.768650632697891 0.0 32 6.42536735029898E-4 0.0 0.0 13.097629441033199 0.0 33 6.42536735029898E-4 0.0 0.0 13.409982611349609 0.0 34 6.42536735029898E-4 0.0 0.0 13.727476075546257 0.0 35 6.42536735029898E-4 0.0 0.0 14.06183612903744 0.0 36 6.42536735029898E-4 0.0 0.0 14.399730134571287 0.0 37 6.42536735029898E-4 0.0 0.0 14.72011501407557 0.0 38 6.42536735029898E-4 0.0 0.0 15.042507820876821 0.0 39 6.42536735029898E-4 0.0 0.0 15.383453875902061 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATTC 25 3.890993E-5 45.000004 12 CGCCTAT 20 7.033512E-4 45.000004 38 AGACGTC 20 7.033512E-4 45.000004 16 CTACCGT 25 3.890993E-5 45.000004 19 TTACGTG 20 7.033512E-4 45.000004 23 ATCGCGA 25 3.890993E-5 45.000004 12 GCGTACA 20 7.033512E-4 45.000004 1 TCGAACC 20 7.033512E-4 45.000004 14 ACGATAG 35 1.212029E-7 45.0 1 CGTTTTT 35305 0.0 44.458294 1 CGATAGA 60 3.6379788E-12 41.250004 10 GTTTTTT 39410 0.0 40.152878 2 TTTAGCG 40 3.4585355E-7 39.375004 1 CGATCGC 40 3.4585355E-7 39.375004 10 CCGTTCG 35 6.248709E-6 38.571426 5 CACAACG 65 9.094947E-12 38.076927 12 GGCTACG 65 9.094947E-12 38.076927 1 CGCATGG 125 0.0 37.8 2 CCTACCG 30 1.13997645E-4 37.500004 18 TTATCGG 30 1.13997645E-4 37.500004 2 >>END_MODULE