SRR2934919.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934919.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1457749
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	58949	4.043837450754554	No Hit
CCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGC	3778	0.2591667015377819	No Hit
GCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGC	3749	0.257177332997656	No Hit
CTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGCT	1902	0.13047513666618876	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	1573	0.10790609357303622	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTAGC	25	3.8913226E-5	45.0	24
TATCTCG	20	7.0339104E-4	45.0	41
GTAGACG	25	3.8913226E-5	45.0	1
ACTACGT	25	3.8913226E-5	45.0	18
CACAACG	20	7.0339104E-4	45.0	12
ACGAACT	20	7.0339104E-4	45.0	22
CGTTTTT	40045	0.0	44.35385	1
ACGTTAG	70	0.0	41.785713	1
ATCGCTA	60	3.6379788E-12	41.250004	19
TCAATCG	55	6.184564E-11	40.909092	16
TCGACGT	55	6.184564E-11	40.909092	26
CGACGGT	50	1.0822987E-9	40.5	28
GTTTTTT	44820	0.0	39.83936	2
GAATGCG	80	0.0	39.375	1
TGCGCGA	35	6.2494437E-6	38.571426	15
ACGGATA	35	6.2494437E-6	38.571426	20
TGCAACG	70	0.0	38.571426	1
TACGTAG	100	0.0	38.25	1
ACGTAGG	165	0.0	38.18182	2
TATTGCG	65	9.094947E-12	38.076927	1